>emb|AL928696.6| Mouse DNA sequence from clone RP23-387G11 on chromosome 2, complete
             sequence
          Length = 102448

 Score = 42.1 bits (21), Expect = 0.072
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    tactattccagtaaagtagtt 35
             |||||||||||||||||||||
Sbjct: 55547 tactattccagtaaagtagtt 55567

>gb|AC011299.3| Homo sapiens BAC clone RP11-232C20 from 7, complete sequence
          Length = 147712

 Score = 40.1 bits (20), Expect = 0.28
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gaatattctactattccagt 26
             ||||||||||||||||||||
Sbjct: 30004 gaatattctactattccagt 30023

>gb|AC144613.1| Pan troglodytes BAC clone RP43-1F6 from 7, complete sequence
          Length = 177443

 Score = 40.1 bits (20), Expect = 0.28
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     gaatattctactattccagt 26
             ||||||||||||||||||||
Sbjct: 95544 gaatattctactattccagt 95525

>gb|AC122262.3| Mus musculus BAC clone RP23-190N21 from chromosome 9, complete sequence
          Length = 193762

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    ccagtaaagtagttcttac 40
             |||||||||||||||||||
Sbjct: 91647 ccagtaaagtagttcttac 91665

>gb|AC163290.2| Mus musculus BAC clone RP23-270I16 from chromosome 9, complete sequence
          Length = 195649

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     ccagtaaagtagttcttac 40
              |||||||||||||||||||
Sbjct: 174524 ccagtaaagtagttcttac 174542

>gb|AC124850.2| Homo sapiens chromosome 5 clone CTD-2166H5, complete sequence
          Length = 120112

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 6      ggaatattctactattccagtaa 28
              |||||||| ||||||||||||||
Sbjct: 110915 ggaatattttactattccagtaa 110893

>gb|AC138938.2| Homo sapiens chromosome 5 clone RP11-697E23, complete sequence
          Length = 165477

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 6  ggaatattctactattccagtaa 28
          |||||||| ||||||||||||||
Sbjct: 58 ggaatattttactattccagtaa 80

>gb|AC138411.1| Homo sapiens chromosome 5 clone RP11-864N22, complete sequence
          Length = 170816

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 6     ggaatattctactattccagtaa 28
             |||||||| ||||||||||||||
Sbjct: 43511 ggaatattttactattccagtaa 43533

>gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosome 6, complete sequence
          Length = 197171

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ctattccagtaaagtagtt 35
             |||||||||||||||||||
Sbjct: 49648 ctattccagtaaagtagtt 49630

>gb|AE006643.1| Sulfolobus solfataricus P2 section 2 of 272 of the complete genome
          Length = 10464

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 15   tactattccagtaaagta 32
            ||||||||||||||||||
Sbjct: 9562 tactattccagtaaagta 9545

>emb|AL844142.5| Mouse DNA sequence from clone RP23-355C24 on chromosome 4, complete
             sequence
          Length = 121550

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    tattctactattccagta 27
             ||||||||||||||||||
Sbjct: 13340 tattctactattccagta 13357

>gb|AC107221.5| Homo sapiens BAC clone RP11-609N18 from 4, complete sequence
          Length = 115870

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    tccagtaaagtagttctt 38
             ||||||||||||||||||
Sbjct: 55309 tccagtaaagtagttctt 55292

>gb|AC108941.4| Homo sapiens BAC clone RP11-736K12 from 4, complete sequence
          Length = 179273

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 5    aggaatattctactattc 22
            ||||||||||||||||||
Sbjct: 6231 aggaatattctactattc 6214

>gb|AC097481.3| Homo sapiens BAC clone RP11-125F12 from 4, complete sequence
          Length = 103566

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 7     gaatattctactattcca 24
             ||||||||||||||||||
Sbjct: 52413 gaatattctactattcca 52430

>gb|AC104666.3| Homo sapiens BAC clone RP11-771N14 from 2, complete sequence
          Length = 23884

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 2    tggaggaatattctacta 19
            ||||||||||||||||||
Sbjct: 9577 tggaggaatattctacta 9594

>gb|AC115978.23| Mus musculus chromosome 14, clone RP24-83J8, complete sequence
          Length = 200865

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 17  ctattccagtaaagtagt 34
           ||||||||||||||||||
Sbjct: 223 ctattccagtaaagtagt 240

>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence
          Length = 190623

 Score = 36.2 bits (18), Expect = 4.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 17    ctattccagtaaagtagt 34
             ||||||||||||||||||
Sbjct: 35664 ctattccagtaaagtagt 35647


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 255,613
Number of Sequences: 3902068
Number of extensions: 255613
Number of successful extensions: 67588
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67549
Number of HSP's gapped (non-prelim): 39
length of query: 40
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 20
effective length of database: 17,155,003,908
effective search space: 343100078160
effective search space used: 343100078160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)