Clone Name | rbart52f11 |
---|---|
Clone Library Name | barley_pub |
>emb|CR293504.11| Zebrafish DNA sequence from clone CH211-147G3 in linkage group 10, complete sequence Length = 165086 Score = 42.1 bits (21), Expect = 0.19 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 aaactaataatgtacataggt 36 ||||||||||||||||||||| Sbjct: 113910 aaactaataatgtacataggt 113930
>gb|AC089993.2| Bos taurus clone RP42-553M7, complete sequence Length = 162859 Score = 40.1 bits (20), Expect = 0.76 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 atttgaaaactaataatgta 29 |||||||||||||||||||| Sbjct: 53929 atttgaaaactaataatgta 53910
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 0.76 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 atttgaaaactaataatgta 29 |||||||||||||||||||| Sbjct: 1420435 atttgaaaactaataatgta 1420416
>gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, complete sequence Length = 191935 Score = 40.1 bits (20), Expect = 0.76 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 atgtacataggttatgccca 44 |||||||||||||||||||| Sbjct: 72213 atgtacataggttatgccca 72194
>gb|AC005058.1|AC005058 Homo sapiens BAC clone CTB-54D4 from 7q31, complete sequence Length = 182256 Score = 40.1 bits (20), Expect = 0.76 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 atttgaaaactaataatgtacata 33 |||| ||||||||||||||||||| Sbjct: 48542 attttaaaactaataatgtacata 48565
>gb|AC119171.10| Mus musculus chromosome 8, clone RP23-201B1, complete sequence Length = 192853 Score = 40.1 bits (20), Expect = 0.76 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gttgctacatttgaaaacta 21 |||||||||||||||||||| Sbjct: 30221 gttgctacatttgaaaacta 30202
>gb|AC165410.4| Mus musculus chromosome 8, clone RP23-267F17, complete sequence Length = 163899 Score = 40.1 bits (20), Expect = 0.76 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttgctacatttgaaaacta 21 |||||||||||||||||||| Sbjct: 110532 gttgctacatttgaaaacta 110551
>gb|DQ158857.1| Bigelowiella natans nucleomorph chromosome 2, partial sequence Length = 134144 Score = 38.2 bits (19), Expect = 3.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 tacatttgaaaactaataatgta 29 ||||||| ||||||||||||||| Sbjct: 24291 tacattttaaaactaataatgta 24313
>gb|AC021518.12| Homo sapiens chromosome 8, clone RP11-313D2, complete sequence Length = 169566 Score = 38.2 bits (19), Expect = 3.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 atttgaaaactaataatgtacat 32 |||||| |||||||||||||||| Sbjct: 71516 atttgataactaataatgtacat 71494
>gb|AC012535.11| Homo sapiens chromosome 8, clone RP11-115G12, complete sequence Length = 173414 Score = 38.2 bits (19), Expect = 3.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 atttgaaaactaataatgtacat 32 |||||| |||||||||||||||| Sbjct: 85405 atttgataactaataatgtacat 85383
>emb|BX510369.6| Zebrafish DNA sequence from clone CH211-126I22 in linkage group 10, complete sequence Length = 168142 Score = 38.2 bits (19), Expect = 3.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 atttgaaaactaataatgtacat 32 ||||||||||||| ||||||||| Sbjct: 130779 atttgaaaactaaaaatgtacat 130757
>gb|AC013492.5|AC013492 Homo sapiens chromosome , clone RP11-32K4, complete sequence Length = 167174 Score = 38.2 bits (19), Expect = 3.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 atttgaaaactaataatgtacat 32 |||||| |||||||||||||||| Sbjct: 2884 atttgataactaataatgtacat 2862
>emb|CR925745.5| Zebrafish DNA sequence from clone DKEYP-100G5 in linkage group 10, complete sequence Length = 197787 Score = 38.2 bits (19), Expect = 3.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 8 acatttgaaaactaataatgtacatag 34 ||||||||||| ||||| ||||||||| Sbjct: 82557 acatttgaaaagtaatagtgtacatag 82583
>emb|AL627102.21| Mouse DNA sequence from clone RP23-291A3 on chromosome 3, complete sequence Length = 211349 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 ataatgtacataggttatg 40 ||||||||||||||||||| Sbjct: 51261 ataatgtacataggttatg 51279
>emb|AL663106.18| Mouse DNA sequence from clone CT7-314H19 on chromosome 3, complete sequence Length = 177223 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 ataatgtacataggttatg 40 ||||||||||||||||||| Sbjct: 37306 ataatgtacataggttatg 37288 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 685,673 Number of Sequences: 3902068 Number of extensions: 685673 Number of successful extensions: 47211 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47176 Number of HSP's gapped (non-prelim): 35 length of query: 75 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 54 effective length of database: 17,151,101,840 effective search space: 926159499360 effective search space used: 926159499360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)