>gb|AC018694.4|AC018694 Homo sapiens BAC clone RP11-563P16 from 11, complete sequence
          Length = 196832

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    tttctgaattaatacatgatt 83
             |||||||||||||||||||||
Sbjct: 60346 tttctgaattaatacatgatt 60326

>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057E15, complete sequence
          Length = 149035

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gtcgcctcctccatggcgcc 226
             ||||||||||||||||||||
Sbjct: 83483 gtcgcctcctccatggcgcc 83502

>gb|AC164102.2| Mus musculus BAC clone RP23-7E23 from chromosome 13, complete sequence
          Length = 234552

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     acttaagcatgtgactttcc 115
              ||||||||||||||||||||
Sbjct: 149673 acttaagcatgtgactttcc 149692

>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 57    tttttctttctgaattaatacatg 80
             |||||||||||||||| |||||||
Sbjct: 16479 tttttctttctgaatttatacatg 16502

>gb|AC108671.5| Homo sapiens 3 BAC RP11-443P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 173877

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      agtactggaaggaagcatga 22
              ||||||||||||||||||||
Sbjct: 137128 agtactggaaggaagcatga 137109

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 88     gcgctgaaacttaagcatgtgact 111
              ||||||||||||||||||| ||||
Sbjct: 349812 gcgctgaaacttaagcatgcgact 349789

>gb|AY028709.1| Mus musculus mammalian ependymin related protein-2 (MERP2) gene,
             complete cds
          Length = 26900

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    acttaagcatgtgactttcc 115
             ||||||||||||||||||||
Sbjct: 25377 acttaagcatgtgactttcc 25358

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 207      gtcgcctcctccatggcgcc 226
                ||||||||||||||||||||
Sbjct: 16442884 gtcgcctcctccatggcgcc 16442903

>gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, complete sequence
          Length = 224420

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    acttaagcatgtgactttcc 115
             ||||||||||||||||||||
Sbjct: 54282 acttaagcatgtgactttcc 54301

>emb|Z49288.1|SCYJL013C S.cerevisiae chromosome X reading frame ORF YJL013c
          Length = 2289

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   tttttctttctgaattaata 76
            ||||||||||||||||||||
Sbjct: 1348 tttttctttctgaattaata 1367

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 207      gtcgcctcctccatggcgcc 226
                ||||||||||||||||||||
Sbjct: 16533888 gtcgcctcctccatggcgcc 16533907

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 88      gcgctgaaacttaagcatgtgact 111
               ||||||||||||||||||| ||||
Sbjct: 2000364 gcgctgaaacttaagcatgcgact 2000387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,162,211
Number of Sequences: 3902068
Number of extensions: 2162211
Number of successful extensions: 34679
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34628
Number of HSP's gapped (non-prelim): 51
length of query: 230
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 208
effective length of database: 17,147,199,772
effective search space: 3566617552576
effective search space used: 3566617552576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)