ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart52f07 |
|---|---|
| Clone Library Name | barley_pub |
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 35.4 bits (80), Expect = 0.035 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = -2 Query: 343 GVFTGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGPAERSLRSFV 182 GVF E+ RCV +M G A R+ + A+ VA GG ++R+L FV Sbjct: 408 GVFLRGEVERCVRAVMDGGEAASAARKAAGEWRDRARAAVAPGGSSDRNLDEFV 461
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 7/78 (8%) Frame = +3 Query: 132 GGVHSCKLHPTFEP-TSRTKLRRLRSAGPPKATTS------CATPFRASTLSLTSMAVGP 290 GG HS K P TS +S P TTS +P S+ +TS Sbjct: 182 GGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAPMTSPPAPM 241 Query: 291 *PMSSSTHLASSSPVKTP 344 P SSST SS+P+ +P Sbjct: 242 APKSSSTIPPSSAPMTSP 259
>AROE_ARCFU (O27957) Shikimate dehydrogenase (EC 1.1.1.25)| Length = 269 Score = 30.0 bits (66), Expect = 1.5 Identities = 25/82 (30%), Positives = 33/82 (40%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGPAERSLRSFVLEVGSNVG* 155 T E+ VE+L YG RVE LKG VV +R F E+ Sbjct: 145 TEEKGREAVEMLRRYGECIFWPLSRVEELKGKVDVVV---NATPLGMRGFKAEIP----- 196 Query: 154 SLHECTPPNMSMSIKYVRDTLY 89 PP+M ++ V DT+Y Sbjct: 197 -----VPPSMLDGVELVFDTVY 213
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 29.6 bits (65), Expect = 1.9 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Frame = +3 Query: 144 SC-KLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*PM-SSSTHL 317 SC K PT P + T + + P TT C ++ + T P P SSST Sbjct: 266 SCTKEKPT--PPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTE 323 Query: 318 ASSSPVKTP 344 +SS+PV TP Sbjct: 324 SSSAPVPTP 332 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +3 Query: 159 PTFEPTSRTKLRRLRSAGPPKATT--SCATPFRASTLSLTSMAVGP*PMSSSTHLASSSP 332 P P+S T A P ++T S + P +ST +S V P P SS+T +SS+P Sbjct: 595 PVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPV-PTPSSSTTE-SSSAP 652 Query: 333 VKTP 344 V TP Sbjct: 653 VPTP 656 Score = 28.5 bits (62), Expect = 4.3 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +3 Query: 171 PTSRTKLRRLRSAGPPKATT-SCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVKTP 344 PT + SA +TT S + P +ST +S V P P SS+T +SS+PV TP Sbjct: 669 PTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPV-PTPSSSTTE-SSSAPVPTP 725 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = +3 Query: 159 PTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVK 338 P P+S T P ++T+ ++ A T S ++ P++SST +SS+PV Sbjct: 580 PVPTPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVP 639 Query: 339 TP 344 TP Sbjct: 640 TP 641 Score = 28.1 bits (61), Expect = 5.6 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +3 Query: 171 PTSRTKLRRLRSAGPPKATT---SCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVKT 341 PT + SA +TT S P +S+ + +S A P P SS+T +SS+PV T Sbjct: 738 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE-SSSAPVPT 796 Query: 342 P 344 P Sbjct: 797 P 797 Score = 27.7 bits (60), Expect = 7.3 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +3 Query: 171 PTSRTKLRRLRSAGPP----KATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVK 338 PT + SA P T S + P +ST +S V P P SS+T +SS+PV Sbjct: 723 PTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV-PTPSSSTTE-SSSAPVP 780 Query: 339 TP 344 TP Sbjct: 781 TP 782 Score = 27.3 bits (59), Expect = 9.6 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +3 Query: 171 PTSRTKLRRLRSAGPP----KATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVK 338 PT + SA P T S + P +ST +S P++SST +SS+PV Sbjct: 654 PTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSA-----PVTSSTTESSSAPVP 708 Query: 339 TP 344 TP Sbjct: 709 TP 710 Score = 27.3 bits (59), Expect = 9.6 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +3 Query: 174 TSRTKLRRLRSAGP-PKATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVKTP 344 TS+T ++ + P P ++T+ ++ T S ++ P++SST +SS+PV TP Sbjct: 302 TSKTCTKKTTTPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTP 359
>COT1_NEUCR (P38679) Serine/threonine-protein kinase cot-1 (EC 2.7.11.1)| (Colonial temperature-sensitive 1) Length = 598 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 132 GGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPF 248 GG H K H F LRR+R+ P+ T++ T + Sbjct: 507 GGAHEIKSHAFFRGVEFDSLRRIRAPFEPRLTSAIDTTY 545
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = +3 Query: 171 PTSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVKTP 344 PTS L SA AT++ +TP +S S T+ + P+SS ++S TP Sbjct: 416 PTSSVSSTPLSSANSTTATSASSTPL-SSVNSTTATSASSTPLSSVNSTTATSASSTP 472
>POLN_ONNVS (O90368) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2513 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +3 Query: 90 YRVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSL 269 Y+V+ Y +DM G SC TF P+ + S P ++ +PF+ + ++ Sbjct: 2041 YQVTDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHAPTIRSAVPSPFQNTLQNV 2100 Query: 270 TSMA 281 + A Sbjct: 2101 LAAA 2104
>POLN_ONNVI (O90370) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2513 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +3 Query: 90 YRVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSL 269 Y+V+ Y +DM G SC TF P+ + S P ++ +PF+ + ++ Sbjct: 2041 YQVTDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHAPTIRSAVPSPFQNTLQNV 2100 Query: 270 TSMA 281 + A Sbjct: 2101 LAAA 2104
>POLN_ONNVG (P13886) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2514 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +3 Query: 90 YRVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSL 269 Y+V+ Y +DM G SC TF P+ + S P ++ +PF+ + ++ Sbjct: 2042 YQVTDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHAPTIRSAVPSPFQNTLQNV 2101 Query: 270 TSMA 281 + A Sbjct: 2102 LAAA 2105
>POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +3 Query: 174 TSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*P 296 T+ T RRL+ PP +S A+ A +L T A G P Sbjct: 2186 TAETASRRLKRGSPPSLASSSASQLSAPSLKATCTANGDHP 2226
>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2| Length = 437 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 231 SCATPFRASTLSLTSMAVGP*PMSSSTHLASSSPVKT 341 S + + S SLT M V P P+ SS+ SS+PV + Sbjct: 356 SSSLSYSPSASSLTDMPVAPYPIGSSSLSGSSAPVSS 392
>POLN_CHIK3 (Q5XXP4) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2474 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/64 (23%), Positives = 29/64 (45%) Frame = +3 Query: 90 YRVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSL 269 Y+++ Y +DM G SC TF P+ + S P ++ +PF+ + ++ Sbjct: 2002 YQITDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHAPTIRSAVPSPFQNTLQNV 2061 Query: 270 TSMA 281 + A Sbjct: 2062 LAAA 2065
>ANDR_MOUSE (P19091) Androgen receptor (Dihydrotestosterone receptor)| Length = 899 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGP 209 + +EL + V + MG G A+E E L+G LGGP Sbjct: 228 SAKELCKAVSVSMGLGVEALEHLSPGEQLRGDCMYASLLGGP 269
>RECR_CLOAB (Q97MR4) Recombination protein recR| Length = 198 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -2 Query: 301 LMGYGPTAIEVRERVEALKGVAQEVVALGGP 209 ++G GP +I++RE V + G +EV+ P Sbjct: 115 MLGKGPDSIKLRELVSRMNGKVKEVIVATNP 145
>ANDR_CROCR (Q8MIK0) Androgen receptor (Dihydrotestosterone receptor)| Length = 912 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGP 209 + +EL + V + MG G A+E E L+G LGGP Sbjct: 243 SAKELCKAVSVSMGLGVEALEHLSPGEQLRGDCMYAPLLGGP 284
>ANDR_RAT (P15207) Androgen receptor (Dihydrotestosterone receptor)| Length = 902 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGP 209 + +EL + V + MG G A+E E L+G LGGP Sbjct: 231 SAKELCKAVSVSMGLGVEALEHLSPGEQLRGDCMYASLLGGP 272
>ANDR_CANFA (Q9TT90) Androgen receptor (Dihydrotestosterone receptor)| Length = 907 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGP 209 + +EL + V + MG G A+E E L+G LGGP Sbjct: 238 SAKELCKAVSVSMGLGVEALEHLSPGEQLRGDCMYAPLLGGP 279
>SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SALL2) (HSal2)| Length = 1007 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/63 (30%), Positives = 27/63 (42%) Frame = +2 Query: 146 VQTSSDV*TDLQDEASEAPLRRPAQSHHLLRHPFQSLYSFPDLNGRRAITHEQLDAPREL 325 VQTS + + +S + P Q+ L HP S + F G +H+ AP Sbjct: 248 VQTSKTLASSSSSSSSSSGAETPKQAFFHLYHPLGSQHPFS--AGGVGRSHKPTPAPSPA 305 Query: 326 LPG 334 LPG Sbjct: 306 LPG 308
>MYCB2_MOUSE (Q7TPH6) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4711 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = -3 Query: 120 CRLSTYGTPYTSGVLRKLLFFRSKLTHTLRPPIVS 16 C LS+ GT T G + ++L++RS+ L+ ++S Sbjct: 1822 CSLSSNGTNQTRGQIPQILYYRSEFDGDLQSQLLS 1856
>MYCB2_HUMAN (O75592) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4641 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = -3 Query: 120 CRLSTYGTPYTSGVLRKLLFFRSKLTHTLRPPIVS 16 C LS+ GT T G + ++L++RS+ L+ ++S Sbjct: 1825 CSLSSNGTNQTRGQIPQILYYRSEFDGDLQSQLLS 1859
>POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3 Length = 2410 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/64 (21%), Positives = 30/64 (46%) Frame = +3 Query: 90 YRVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSL 269 Y+++ Y +DM G SC +F P+ + S P+ ++ +PF+ + ++ Sbjct: 1938 YKITDEYDAYLDMVDGSESCLDRSSFSPSRLRSFPKTHSYLDPQINSAVPSPFQNTLQNV 1997 Query: 270 TSMA 281 + A Sbjct: 1998 LAAA 2001
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVV 224 TG+ AR + GPT +E R + L +AQ VV Sbjct: 608 TGDRTARIAPTIDELGPTLVETVRRHDTLPPIAQAVV 644
>PCD_ARTOX (Q01470) Phenmedipham hydrolase (EC 3.1.1.-) (Phenylcarbamate| hydrolase) Length = 493 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 301 LMGYGPTAIEVRERVEALKGVAQEVVALGGPAER 200 L G G + + ++VEAL+ +A V A GG R Sbjct: 148 LAGMGDENVWLTDQVEALRWIADNVAAFGGDPNR 181
>LDHD_STRA3 (Q8E6A9) D-lactate dehydrogenase (EC 1.1.1.28) (D-LDH) (D-specific| D-2-hydroxyacid dehydrogenase) Length = 330 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -2 Query: 310 VELLMGYGPTAIEVRERVEALKGVAQEVVALGGPAERSLRSFVLEVG 170 VEL M GP +E VE G+A + GP + ++ + E+G Sbjct: 25 VELSMSEGPLTLETVNEVEGFDGIANAQI---GPLDDAIYPLLKEMG 68
>TAB2_RAT (Q5U303) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 2 Length = 693 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = +3 Query: 168 EPTSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSSP 332 EP R +LRS+GP A+TS + + ++ + P S+ ++ S P Sbjct: 331 EPPQRNSSSKLRSSGPRTASTSSLVNSQTLNRNQPTVYIAASPPSTDEMISRSQP 385
>POLN_CHIKS (Q8JUX6) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2474 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/64 (21%), Positives = 29/64 (45%) Frame = +3 Query: 90 YRVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSL 269 Y+++ Y +DM G SC TF P+ + + P ++ +PF+ + ++ Sbjct: 2002 YQITDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHAYHAPSIRSAVPSPFQNTLQNV 2061 Query: 270 TSMA 281 + A Sbjct: 2062 LAAA 2065
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 27.3 bits (59), Expect = 9.6 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +3 Query: 141 HSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*PMSSSTHLA 320 HS T T+ + S+ ++++ T ++T S TS + P SSST + Sbjct: 163 HSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSAS 222 Query: 321 SSS 329 SSS Sbjct: 223 SSS 225
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +3 Query: 171 PTSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*PMSSSTHLASSS 329 P S + + L S+ ++++S A+ +S+ +LTS + SSS+H SSS Sbjct: 74 PASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSS 126
>SOMA_VERVA (O93566) Somatotropin precursor (Growth hormone)| Length = 203 Score = 27.3 bits (59), Expect = 9.6 Identities = 8/15 (53%), Positives = 14/15 (93%) Frame = -1 Query: 98 HPIHQVFLENFCFSD 54 HP++++FL++FC SD Sbjct: 57 HPLNKIFLQDFCHSD 71
>HDA6_CAEEL (Q20296) Histone deactylase 6| Length = 955 Score = 27.3 bits (59), Expect = 9.6 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -2 Query: 316 RCVELLMGYGPTAIEVRE 263 RCV +L+GY P +IE+ E Sbjct: 326 RCVRVLLGYAPFSIELNE 343
>CPSY_MYCTU (O06628) Exopolysaccharide phosphotransferase cpsY (EC 2.7.-.-)| (Stealth protein cpsY) Length = 532 Score = 27.3 bits (59), Expect = 9.6 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 93 RVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRAST-LSL 269 RV+R L D FG V + L T P ++ L + P + + A+PFR+ T +S+ Sbjct: 369 RVNRQLLFDR--FGQVITRHLEHTAVPLRKSVLIEMEREFPEEFARTAASPFRSDTDISV 426 Query: 270 TS 275 T+ Sbjct: 427 TN 428
>CPSY_MYCBO (Q7U184) Exopolysaccharide phosphotransferase cpsY (EC 2.7.-.-)| (Stealth protein cpsY) Length = 532 Score = 27.3 bits (59), Expect = 9.6 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 93 RVSRTYLIDMDMFGGVHSCKLHPTFEPTSRTKLRRLRSAGPPKATTSCATPFRAST-LSL 269 RV+R L D FG V + L T P ++ L + P + + A+PFR+ T +S+ Sbjct: 369 RVNRQLLFDR--FGQVITRHLEHTAVPLRKSVLIEMEREFPEEFARTAASPFRSDTDISV 426 Query: 270 TS 275 T+ Sbjct: 427 TN 428
>ANDR_RABIT (P49699) Androgen receptor (Dihydrotestosterone receptor)| (Fragment) Length = 709 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -2 Query: 334 TGEELARCVELLMGYGPTAIEVRERVEALKGVAQEVVALGGP 209 + +EL + V + +G G A+E E L+G LGGP Sbjct: 42 SAKELCKAVSVSLGLGVEALEHLSSGEQLRGDCMYAPLLGGP 83
>POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3012 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/41 (34%), Positives = 18/41 (43%) Frame = +3 Query: 174 TSRTKLRRLRSAGPPKATTSCATPFRASTLSLTSMAVGP*P 296 T+ T RRL PP +S A+ A +L T G P Sbjct: 2179 TAETAARRLARGSPPSLASSSASQLSAPSLKATCTTAGKHP 2219 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,423,658 Number of Sequences: 219361 Number of extensions: 862723 Number of successful extensions: 2642 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2636 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
