>ref|XM_417013.1| PREDICTED: Gallus gallus similar to Krueppel-like factor 5
            (Intestinal-enriched krueppel-like factor) (Colon
            krueppel-like factor) (Transcription factor BTEB2) (Basic
            transcription element binding protein 2) (BTE-binding
            protein 2) (GC box binding protein 2)... (LOC418818),
            mRNA
          Length = 2485

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   aaaacaaaagttttctaagaa 80
            |||||||||||||||||||||
Sbjct: 2457 aaaacaaaagttttctaagaa 2477

>gb|AC166996.1| Mus musculus BAC clone RP23-268E1 from chromosome 12, complete sequence
          Length = 162710

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    aaaacaaaagttttctaagaa 80
             |||||||||||||||||||||
Sbjct: 92607 aaaacaaaagttttctaagaa 92587

>emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in linkage group 5,
              complete sequence
          Length = 207800

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     tgaaaaacaaaagttttctaa 77
              |||||||||||||||||||||
Sbjct: 106531 tgaaaaacaaaagttttctaa 106551

>emb|BX935940.2| Gallus gallus finished cDNA, clone ChEST429a18
          Length = 1287

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   aaaacaaaagttttctaagaa 80
            |||||||||||||||||||||
Sbjct: 1259 aaaacaaaagttttctaagaa 1279

>emb|BX930662.2| Gallus gallus finished cDNA, clone ChEST377m3
          Length = 913

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  aaaacaaaagttttctaagaa 80
           |||||||||||||||||||||
Sbjct: 884 aaaacaaaagttttctaagaa 904

>ref|NM_186076.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gctccgctccgccggcccgc 216
           ||||||||||||||||||||
Sbjct: 52  gctccgctccgccggcccgc 33

>emb|AL158829.14| Human DNA sequence from clone RP11-406O23 on chromosome 9 Contains part
             of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor
             protein 2 (paralemmin 2), a novel gene and a CpG island,
             complete sequence
          Length = 136723

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    tttgatctgaaaaacaaaag 69
             ||||||||||||||||||||
Sbjct: 75592 tttgatctgaaaaacaaaag 75611

>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    aacccatgagcagctcgacg 311
              ||||||||||||||||||||
Sbjct: 108568 aacccatgagcagctcgacg 108549

>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   aacccatgagcagctcgacg 311
             ||||||||||||||||||||
Sbjct: 24561 aacccatgagcagctcgacg 24542

>emb|CR388130.8| Zebrafish DNA sequence from clone CH211-276A12 in linkage group 15,
             complete sequence
          Length = 78308

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   atggacatgtttggtggtgt 139
             ||||||||||||||||||||
Sbjct: 16802 atggacatgtttggtggtgt 16821

>emb|BX005338.9| Zebrafish DNA sequence from clone DKEY-14I9 in linkage group 20
             Conatins a CpG island, complete sequence
          Length = 159482

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tgaaaaacaaaagttttcta 76
             ||||||||||||||||||||
Sbjct: 20514 tgaaaaacaaaagttttcta 20533

>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     aaaacaaaagttttctaaga 79
              ||||||||||||||||||||
Sbjct: 152390 aaaacaaaagttttctaaga 152371

>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aaaacaaaagttttctaaga 79
             ||||||||||||||||||||
Sbjct: 42656 aaaacaaaagttttctaaga 42637

>gb|AC008442.6| Homo sapiens chromosome 5 clone CTC-331P4, complete sequence
          Length = 171937

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    atgtatgtgtcagctttgat 55
             ||||||||||||||||||||
Sbjct: 27612 atgtatgtgtcagctttgat 27631

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 197      gctccgctccgccggcccgc 216
                ||||||||||||||||||||
Sbjct: 28033371 gctccgctccgccggcccgc 28033390

>gb|AC090499.6| Homo sapiens BAC clone RP11-170O3 from 2, complete sequence
          Length = 18255

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 45   tcagctttgatctgaaaaacaaaa 68
            ||||||||| ||||||||||||||
Sbjct: 1501 tcagctttgttctgaaaaacaaaa 1524

>gb|AC093731.2| Homo sapiens BAC clone RP11-12L16 from 2, complete sequence
          Length = 190686

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     tcagctttgatctgaaaaacaaaa 68
              ||||||||| ||||||||||||||
Sbjct: 190187 tcagctttgttctgaaaaacaaaa 190210

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1343_D04
          Length = 143407

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    gctccgctccgccggcccgc 216
              ||||||||||||||||||||
Sbjct: 122705 gctccgctccgccggcccgc 122724

>emb|AL954767.11| Zebrafish DNA sequence from clone CH211-225B14 in linkage group 21,
              complete sequence
          Length = 182923

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    atggacatgtttggtggtgt 139
              ||||||||||||||||||||
Sbjct: 147374 atggacatgtttggtggtgt 147355

>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0450A04
          Length = 162545

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   gctccgctccgccggcccgc 216
             ||||||||||||||||||||
Sbjct: 16667 gctccgctccgccggcccgc 16686

>emb|BX537305.32| Zebrafish DNA sequence from clone DKEY-45L12, complete sequence
          Length = 186856

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   atggacatgtttggtggtgt 139
             ||||||||||||||||||||
Sbjct: 50562 atggacatgtttggtggtgt 50581


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,735,451
Number of Sequences: 3902068
Number of extensions: 2735451
Number of successful extensions: 53752
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53698
Number of HSP's gapped (non-prelim): 54
length of query: 344
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 322
effective length of database: 17,147,199,772
effective search space: 5521398326584
effective search space used: 5521398326584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)