ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart52f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DHB8_CANFA (Q5TJF5) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.... 30 2.2
2DHB8_HUMAN (Q92506) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.... 30 2.2
3DHB8_PIG (Q9XT00) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62... 28 6.4

>DHB8_CANFA (Q5TJF5) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62)|
           (17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
          Length = 259

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 67  RINEDEQWSKIVSSNLKGLPT*LTHAVLCAPTHGCRGCAENMIS 198
           R++ED+ W ++++ NLKG+      A     + GCRG   N+ S
Sbjct: 112 RMSEDD-WDRVIAVNLKGIFLVTQAAAQALVSSGCRGSIINISS 154



to top

>DHB8_HUMAN (Q92506) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62)|
           (17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
           (Protein Ke6) (Ke-6)
          Length = 261

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 34  CAIYVQRLLGYRINEDEQWSKIVSSNLKGLPT*LTHAVLCAPTHGCRGCAENMIS 198
           CA   Q      ++ED+ W K+++ NLKG       A     ++GCRG   N+ S
Sbjct: 103 CAGITQDEFLLHMSEDD-WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS 156



to top

>DHB8_PIG (Q9XT00) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62)|
           (17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
           (Ke6 protein) (Ke-6)
          Length = 259

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 67  RINEDEQWSKIVSSNLKGLPT*LTHAVLCAPTHGCRGCAENMIS 198
           R++ED+ W K+++ NLKG+      A     + GC G   N+ S
Sbjct: 112 RMSEDD-WDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISS 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,015,565
Number of Sequences: 219361
Number of extensions: 461062
Number of successful extensions: 927
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top