ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart52e08 |
|---|---|
| Clone Library Name | barley_pub |
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 111 bits (277), Expect = 5e-25 Identities = 51/68 (75%), Positives = 58/68 (85%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQ 160 EEA+ELARRAIYHAT+RDGASG VSVY+VGPDGWKK++GDDVG+LH+ YYPV A VEQ Sbjct: 205 EEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDDVGDLHFQYYPVVPATVEQ 264 Query: 159 EMAEAPSA 136 EM E A Sbjct: 265 EMVEVVGA 272
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 110 bits (275), Expect = 9e-25 Identities = 51/65 (78%), Positives = 55/65 (84%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQ 160 EEA+ELARR+IYHATFRDGASG SVY+VGP+GW KLSGDDVGELHYHYYPV A EQ Sbjct: 207 EEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQ 266 Query: 159 EMAEA 145 M EA Sbjct: 267 VMEEA 271
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 105 bits (263), Expect = 2e-23 Identities = 49/65 (75%), Positives = 52/65 (80%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQ 160 EEA+ELARR+IYHATFRDGASG SVY+VGP GW KLSGDDVGELHYHYYPV E Sbjct: 207 EEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDDVGELHYHYYPVAPITAEH 266 Query: 159 EMAEA 145 M EA Sbjct: 267 VMEEA 271
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 62.4 bits (150), Expect = 3e-10 Identities = 29/53 (54%), Positives = 38/53 (71%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHYYPV 181 EEA +LARRAIY AT+RD SG V++Y+V DGW ++S D+V +LH Y V Sbjct: 154 EEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSV 206
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 62.0 bits (149), Expect = 4e-10 Identities = 28/50 (56%), Positives = 37/50 (74%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 EEA +LARRAIY AT+RD SG V++Y+V DGW ++S D+V +LH Y Sbjct: 154 EEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKY 203
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) (Proteasome subunit MB1) Length = 208 Score = 61.2 bits (147), Expect = 6e-10 Identities = 27/50 (54%), Positives = 37/50 (74%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 E+A +LARRAIY AT+RD SG V++Y+V DGW ++S D+V +LH Y Sbjct: 154 EQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKY 203
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 59.7 bits (143), Expect = 2e-09 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 +EA ELARRAI+ A RD SG V+VY+VGP GW+++S DV LH Y Sbjct: 205 DEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHDVAGLHDGY 254
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 53.9 bits (128), Expect = 1e-07 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 EEA +L RRAI +AT RD SG V++Y++ DGW K+ DV +L Y Y Sbjct: 222 EEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 53.9 bits (128), Expect = 1e-07 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 EEA EL RRAI +AT RD SG +++Y++ DGW K+ DV EL + Y Sbjct: 222 EEAYELGRRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQY 271
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/50 (50%), Positives = 34/50 (68%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 EEA +LARRAI +AT RD SG V++Y++ DGW K+ DV +L + Y Sbjct: 222 EEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDGWVKVESTDVSDLLHKY 271
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 52.0 bits (123), Expect = 4e-07 Identities = 24/50 (48%), Positives = 33/50 (66%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHYHY 190 EEA +L RRAI +AT RD SG V++Y++ DGW K+ DV +L + Y Sbjct: 222 EEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)| (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2) (Multicatalytic endopeptidase complex subunit PRE2) Length = 287 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGELHY 196 E+A L +R+I A RD SG V++Y+V DGW DVGEL + Sbjct: 226 EDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFW 273
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome component pts1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) Length = 272 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGEL 202 +EA LA+R+I AT RD SG V++Y++ +GW DV L Sbjct: 211 QEALYLAQRSIVAATHRDAYSGGSVNLYHIDENGWVFHGNFDVDSL 256
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 35.4 bits (80), Expect = 0.035 Identities = 17/43 (39%), Positives = 28/43 (65%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDV 211 +E +LA RAI++AT RD ASG + V + + +K+L ++V Sbjct: 160 KEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRLDPEEV 202
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 35.0 bits (79), Expect = 0.046 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKLSGDDVGEL 202 +EA ELA RAIY A RD ASG + V + D + + S ++V ++ Sbjct: 162 DEAVELAVRAIYSAMKRDSASGDGIDVVKITEDEFYQYSPEEVEQI 207
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 32.0 bits (71), Expect = 0.39 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDG--WKKLSGDDVGELHYHYYPVQA 175 EEA +L A+ A RDGASG V + DG K SGD + H PV + Sbjct: 163 EEAEKLVVTAVSLAIARDGASGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNS 219
>AT8B3_HUMAN (O60423) Probable phospholipid-transporting ATPase IK (EC 3.6.3.1)| (ATPase class I type 8B member 3) Length = 1310 Score = 31.6 bits (70), Expect = 0.51 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +3 Query: 129 RLTRKGPRPSLARREPPGPGSSGSAALRHHLRTASSIRQGQ 251 R TR GP PS A PPGPG +G + + + IR G+ Sbjct: 10 RSTRAGPEPSPA---PPGPGDTGDSDVTQEGSGPAGIRGGE 47
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 30.8 bits (68), Expect = 0.87 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +3 Query: 129 RLTRKGPRPSLARREPPGPGSSGSAALRHHLRTASSIRQGQRSTH*RRRHWLRH 290 R R GP P +E P G+ G RH + R+ + S RRH RH Sbjct: 941 RAHRHGPDPG---KEGPASGTRGERRARHRTGPRACPREAESSEEPARRHRARH 991
>DTD_THET8 (Q5SJQ9) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 152 Score = 30.0 bits (66), Expect = 1.5 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +3 Query: 75 GGKQAPKSKFTGFRTT*IRLTRKGPRPSLARREPPGPGSS-GSAALRHHLRTASSIRQGQ 251 GG+ S+FT + T RKG RPS A+ PP G AAL L+ + G Sbjct: 70 GGEVLLVSQFTLYADT-----RKGNRPSFAKAAPPDQGKRLYEAALEAFLQQGVHVETGV 124 Query: 252 RSTH*R 269 H R Sbjct: 125 YGAHMR 130
>DTD_THET2 (Q72K35) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 152 Score = 30.0 bits (66), Expect = 1.5 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +3 Query: 75 GGKQAPKSKFTGFRTT*IRLTRKGPRPSLARREPPGPGSS-GSAALRHHLRTASSIRQGQ 251 GG+ S+FT + T RKG RPS A+ PP G AAL L+ + G Sbjct: 70 GGEVLLVSQFTLYADT-----RKGNRPSFAKAAPPDQGKRLYEAALEAFLQQGVHVETGV 124 Query: 252 RSTH*R 269 H R Sbjct: 125 YGAHMR 130
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKKL 226 +EAA+LA+RA++ A RD +G V V + G ++L Sbjct: 163 DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKGHEEL 200
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDGWKK 229 EEA E + A+ A RDG+SG + + + DG ++ Sbjct: 174 EEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMER 210
>ENGC_SYNEL (Q8DK79) Probable GTPase engC (EC 3.6.1.-)| Length = 348 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 7/68 (10%) Frame = +3 Query: 108 GFRTT*IRLTR----KGPRPSLARREPP--GPGSSGSAALRHHLRTASSIRQGQRSTH*R 269 G+R + LT+ + RP LA + GP G ++L HL IR G S H Sbjct: 142 GYRCHVLSLTQGIAWQALRPHLANKITVVCGPSGVGKSSLIRHLTPREDIRVGAVSDHWH 201 Query: 270 R-RHWLRH 290 R RH RH Sbjct: 202 RGRHTTRH 209
>PY_DICLA (Q9PT98) Peptide Y precursor| Length = 97 Score = 28.9 bits (63), Expect = 3.3 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 11/57 (19%) Frame = +3 Query: 156 SLARREPPGPGSSGS-----------AALRHHLRTASSIRQGQRSTH*RRRHWLRHG 293 S A PP P S GS AA+RH++ + R G+RST + WL G Sbjct: 24 SFADAYPPKPESPGSNASPEDWAKYHAAVRHYVNLITRQRYGKRSTPEQAVAWLLFG 80
>PDE3A_RAT (Q62865) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC| 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A) Length = 1141 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 51 RGEH*CRGGGKQAPKSKFTGFRTT*IRLTRKGPRPSLA 164 RG+H CRGG +P+ +R ++ R+ P+ S A Sbjct: 26 RGDHRCRGGSPSSPRGSGCCWRALALQPLRRSPQLSSA 63
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 339 EEAAELARRAIYHATFRDGASGACVSVYYVGPDG 238 EEA +L +A+ A RDGASG V + +G Sbjct: 162 EEAEQLVVKAVSLAIARDGASGGVVRTVIINSEG 195
>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (Proteasome| component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) (Fragment) Length = 104 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -2 Query: 339 EEAAELARRAIYHATFRD 286 EEA +L RRAI HAT RD Sbjct: 87 EEAYDLGRRAIVHATHRD 104
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Frame = +3 Query: 84 QAPKSKFTGFRTT*IRLTRKGPRPSLARREPPGP---GSSGSAALRHHLRTASSI 239 QAP + I LT P+ R PPGP GS G+ HLR S+ Sbjct: 776 QAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGPTTLGSLGAGQTPRHLRRLQSL 830
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 28.1 bits (61), Expect = 5.7 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = +3 Query: 72 GGGKQAPKSKFTGFRTT*IRLTRKGPRPSLARREPPGPGSSGSAA 206 GGG Q P G + L GP P A+ PP GS+GS A Sbjct: 99 GGGPQRP-----GPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCA 138
>5HT3R_CAVPO (O70212) 5-hydroxytryptamine 3 receptor precursor (5-HT-3)| (Serotonin-gated ion channel receptor) (5-HT3R) Length = 490 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +3 Query: 150 RPSLARREPPGPGSSGSAALRHHLRTASSIR---QGQRSTH*RRRHWLRHGTLHDK 308 + S R PP P S A+ L+ +SIR + + T R WLR G++ DK Sbjct: 408 KTSRGRGSPPPPPREASLAMCGLLQELASIRHFLEKREETREVARDWLRVGSVLDK 463
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 27.7 bits (60), Expect = 7.4 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 135 TRKGPRPSLARREPPGPGS--SGSAALRHHLRTASSIRQGQRSTH*RR 272 +R G R S +R P S SGSA RH + S+ + RS H RR Sbjct: 46 SRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSGSARSKRSRSAHSRR 93
>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor| Length = 2213 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +3 Query: 138 RKGPRPSLARREPPGPGSSGSAALRHHLRTASSIRQGQR 254 R GP PS R P PG + A R R A+ + G+R Sbjct: 43 RPGPEPSRPRAAPETPGGDTAGAGRCGGRRAAKLGPGRR 81
>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2| Length = 1271 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Frame = -2 Query: 324 LARRAIYHATFR---DGASGACVSVYYVGPDGWKKLSGD----DVGELHYHYYPVQ 178 LAR+ +H R DG S CVS + D W+++ D D G + Y +Q Sbjct: 199 LARQVFHHDIVRRHFDGFSWVCVSQQFTRKDVWQRILQDLRPYDEGIIQMDEYTLQ 254
>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)| Length = 966 Score = 23.9 bits (50), Expect(2) = 8.8 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 141 KGPRPSLARREPPGPGSSGSAALRHHLRTASSIRQGQRST 260 + P S ++ PPG GSS + L + + GQ ST Sbjct: 525 QSPETSTSKDSPPGQGSSPTT----ELPSCQGLPAGQEST 560 Score = 21.9 bits (45), Expect(2) = 8.8 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 55 ENTNVEEEANKPQSPSSRDFA 117 ++++ +E A P+SPSS D A Sbjct: 498 KDSSGQEAAPGPESPSSEDIA 518
>5HT3R_HUMAN (P46098) 5-hydroxytryptamine 3 receptor precursor (5-HT-3)| (Serotonin-gated ion channel receptor) (5-HT3R) Length = 478 Score = 27.3 bits (59), Expect = 9.7 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +3 Query: 141 KGPRPSLARREPPGPGSSGSAALRHHLRTASSIRQGQRSTH*RR---RHWLRHGTLHDK 308 K PR R PP P S A+ L+ SSIRQ R R WLR G++ DK Sbjct: 396 KSPRD---RCSPPPPPREASLAVCGLLQELSSIRQFLEKRDEIREVARDWLRVGSVLDK 451
>SARM1_MOUSE (Q6PDS3) Sterile alpha and TIR motif-containing protein 1 (Tir-1| homolog) Length = 724 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +3 Query: 135 TRKGPRPSLARREPPGPGSSGSAA 206 T GPRP R PGP SG A+ Sbjct: 17 TMSGPRPGADRLTVPGPDRSGGAS 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,901,182 Number of Sequences: 219361 Number of extensions: 814767 Number of successful extensions: 2922 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2813 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2919 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
