Clone Name | rbart52e06 |
---|---|
Clone Library Name | barley_pub |
>gb|L23552.1|SPIHSC70G Spinacia oleracea ER-lumenal protein (HSC70) gene, complete cds Length = 5138 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 tcaaacaacaaatcatcagataa 63 ||||||||||||||||||||||| Sbjct: 2400 tcaaacaacaaatcatcagataa 2378
>gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome 3, complete sequence Length = 190599 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 cataagtccttattcccatga 26 ||||||||||||||||||||| Sbjct: 183885 cataagtccttattcccatga 183905
>emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on chromosome 6 Contains a pseudogene similar to part of ubiquinol-cytochrome c reductase core protein II (UQCRC2), a novel gene and the 3' ends of two novel genes, complete sequence Length = 181891 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tcagataaaacataaccaatc 76 ||||||||||||||||||||| Sbjct: 164956 tcagataaaacataaccaatc 164976
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence Length = 209322 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 tcccatgaatttgggtatgcg 39 ||||||||||||||||||||| Sbjct: 149694 tcccatgaatttgggtatgcg 149674
>gb|AC011900.6| Homo sapiens BAC clone RP11-542L18 from 2, complete sequence Length = 184053 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cagttcttgctagcttcttca 224 ||||||||||||||||||||| Sbjct: 59570 cagttcttgctagcttcttca 59550
>gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complete sequence Length = 162197 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 cataagtccttattcccatga 26 ||||||||||||||||||||| Sbjct: 111065 cataagtccttattcccatga 111045
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tctcagttcattgtcagcca 153 |||||||||||||||||||| Sbjct: 185365 tctcagttcattgtcagcca 185384
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ttcccatgaatttgggtatg 37 |||||||||||||||||||| Sbjct: 172527 ttcccatgaatttgggtatg 172546
>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete sequence Length = 176782 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccatgaatttgggtatg 37 |||||||||||||||||||| Sbjct: 136913 ttcccatgaatttgggtatg 136894
>gb|AY367771.1| Triticum aestivum HMW glutenin subunit (1Bx14) gene, complete cds Length = 4021 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tctcagttcattgtcagcca 153 |||||||||||||||||||| Sbjct: 3715 tctcagttcattgtcagcca 3734
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcgttcaaacaacaaatcat 56 |||||||||||||||||||| Sbjct: 1285292 gcgttcaaacaacaaatcat 1285311
>gb|AC115080.13| Mus musculus chromosome 7, clone RP24-464M7, complete sequence Length = 158221 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tctattctcagttcattgtc 148 |||||||||||||||||||| Sbjct: 58151 tctattctcagttcattgtc 58132
>emb|AL808018.7| Mouse DNA sequence from clone RP23-473C10 on chromosome X, complete sequence Length = 172723 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccatgaatttgggtatg 37 |||||||||||||||||||| Sbjct: 16859 ttcccatgaatttgggtatg 16840
>gb|AC121109.5| Mus musculus chromosome 7, clone RP24-445I8, complete sequence Length = 167819 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tctattctcagttcattgtc 148 |||||||||||||||||||| Sbjct: 137296 tctattctcagttcattgtc 137277 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,169,567 Number of Sequences: 3902068 Number of extensions: 2169567 Number of successful extensions: 40169 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40140 Number of HSP's gapped (non-prelim): 29 length of query: 319 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 297 effective length of database: 17,147,199,772 effective search space: 5092718332284 effective search space used: 5092718332284 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)