ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart52d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48) 28 4.7
2CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48) 28 4.7

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 34   GIPRKKK*EMAEHY-TSRITHSTGNRLTKVIKRPNQPGAGRRYVR 165
            G PRK+    A+   T+R+ +   +R+ K ++R N P AG  +VR
Sbjct: 1317 GRPRKENKFSAKRLQTTRLGNHLEDRVNKFLRRQNHPEAGEVFVR 1361



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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 34   GIPRKKK*EMAEHY-TSRITHSTGNRLTKVIKRPNQPGAGRRYVR 165
            G PRK+    A+   T+R+ +   +R+ K ++R N P AG  +VR
Sbjct: 1316 GRPRKENKFSAKRLQTTRLGNHLEDRVNKFLRRQNHPEAGEVFVR 1360


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,297,163
Number of Sequences: 219361
Number of extensions: 552486
Number of successful extensions: 1184
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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