>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 178   ggttcaggaggcccttgaacc 198
             |||||||||||||||||||||
Sbjct: 52487 ggttcaggaggcccttgaacc 52467

>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 178    ggttcaggaggcccttgaacc 198
              |||||||||||||||||||||
Sbjct: 131891 ggttcaggaggcccttgaacc 131871

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    gattaaccaaagtaattaaac 127
              |||||||||||||||||||||
Sbjct: 320411 gattaaccaaagtaattaaac 320391

>ref|NM_001017003.2| Xenopus tropicalis hypothetical protein LOC549757 (LOC549757), mRNA
          Length = 1754

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  cagtacagggaacagattaa 112
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552

>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ggcggcggccgccatggctg 254
             ||||||||||||||||||||
Sbjct: 29333 ggcggcggccgccatggctg 29314

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    gcgccggccggcggtacgta 162
              ||||||||||||||||||||
Sbjct: 472526 gcgccggccggcggtacgta 472507

>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence
          Length = 192806

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    caggaggcccttgaaccaat 201
              ||||||||||||||||||||
Sbjct: 102350 caggaggcccttgaaccaat 102331

>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0076M06, complete sequence
          Length = 133581

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    ggcggcggccgccatggctg 254
              ||||||||||||||||||||
Sbjct: 129150 ggcggcggccgccatggctg 129131

>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ggcggcggccgccatggctg 254
             ||||||||||||||||||||
Sbjct: 92328 ggcggcggccgccatggctg 92309

>dbj|AK158432.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930116E03 product:hypothetical
           Cytochrome c  heme-binding site containing protein, full
           insert sequence
          Length = 1884

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 caggaggcccttgaaccaat 201
           ||||||||||||||||||||
Sbjct: 95  caggaggcccttgaaccaat 114

>dbj|AK158418.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930115D17 product:hypothetical
           Cytochrome c  heme-binding site containing protein, full
           insert sequence
          Length = 1121

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 caggaggcccttgaaccaat 201
           ||||||||||||||||||||
Sbjct: 211 caggaggcccttgaaccaat 230

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      ggcggcggccgccatggctg 254
                ||||||||||||||||||||
Sbjct: 34786769 ggcggcggccgccatggctg 34786750

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      ggcggcggccgccatggctg 254
                ||||||||||||||||||||
Sbjct: 26327501 ggcggcggccgccatggctg 26327482

>ref|NM_001033426.1| Mus musculus gene model 851, (NCBI) (Gm851), mRNA
          Length = 1121

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 caggaggcccttgaaccaat 201
           ||||||||||||||||||||
Sbjct: 211 caggaggcccttgaaccaat 230

>dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O03, full
           insert sequence
          Length = 3399

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ggcggcggccgccatggctg 254
           ||||||||||||||||||||
Sbjct: 135 ggcggcggccgccatggctg 116

>dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E06, full
           insert sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ggcggcggccgccatggctg 254
           ||||||||||||||||||||
Sbjct: 126 ggcggcggccgccatggctg 107

>dbj|AK106728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H07, full
            insert sequence
          Length = 2386

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  ggcggcggccgccatggctg 254
            ||||||||||||||||||||
Sbjct: 2100 ggcggcggccgccatggctg 2119

>dbj|AK105350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A05, full
           insert sequence
          Length = 1300

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ggcggcggccgccatggctg 254
           ||||||||||||||||||||
Sbjct: 57  ggcggcggccgccatggctg 38

>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
             sequence
          Length = 110682

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ggcggcggccgccatggctg 254
             ||||||||||||||||||||
Sbjct: 31971 ggcggcggccgccatggctg 31952

>emb|CR762314.2| Xenopus tropicalis finished cDNA, clone TGas109f05
          Length = 1754

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  cagtacagggaacagattaa 112
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      ggcggcggccgccatggctg 254
                ||||||||||||||||||||
Sbjct: 26641759 ggcggcggccgccatggctg 26641740


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,659,682
Number of Sequences: 3902068
Number of extensions: 1659682
Number of successful extensions: 29592
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29519
Number of HSP's gapped (non-prelim): 73
length of query: 262
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 240
effective length of database: 17,147,199,772
effective search space: 4115327945280
effective search space used: 4115327945280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)