>DOT6_YEAST (P40059) Disrupter of telomere silencing protein 6|
          Length = 670

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 2   SQCNCTAQQVSRARIMNPHPQDTNKRNIGPIPRFRSHAFTP 124
           S+C  T+   S A  MN  P   N ++I  +  FRS A TP
Sbjct: 584 SRCTITSDTSSSAATMNRTPNSKNPQDIALLNNFRSEAITP 624

>RDRP_BPQBE (P14647) RNA-directed RNA polymerase beta chain (EC 2.7.7.48) (RNA|
           replicase beta chain)
          Length = 589

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 108 ERNLGMGPMFLLFVSCGCGFIMRARLTCWAVQLH 7
           +R + + P + +F   G G I+R RL CW + L+
Sbjct: 219 DRCIAIEPGWNMFFQLGIGGILRDRLRCWGIDLN 252

>KPYR_MOUSE (P53657) Pyruvate kinase isozymes R/L (EC 2.7.1.40) (L-PK)|
          Length = 574

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 369 HDGLFGSSEGVTVPSDGGQSEHSSPSELMRRWLGTEHYVRVI 244
           H G  G+ +GV +P+        S  +L+    G EHYV +I
Sbjct: 242 HGGFLGNRKGVNLPNAEVDLPGLSEQDLLDLRFGVEHYVDII 283

>TCEA3_HUMAN (O75764) Transcription elongation factor A protein 3 (Transcription|
           elongation factor S-II protein 3) (Transcription
           elongation factor TFIIS.h)
          Length = 348

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 296 GLECSDWPPSLGTVTPSDEPNNP 364
           GLECSDW P  G   P  +  +P
Sbjct: 102 GLECSDWKPEAGLSPPRKKREDP 124

>ENAM_HUMAN (Q9NRM1) Enamelin precursor|
          Length = 1142

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +1

Query: 4   PMQLHCPAGQSCTHNESASTGYK-----QEEHRPHP 96
           P + H PAG++   ++  S  +K     QEEH PHP
Sbjct: 555 PAKEHFPAGRNTWDHQEISPPFKEDPGRQEEHLPHP 590

>TGA1B_TOBAC (P14233) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b)|
           (HSBF) (Fragment)
          Length = 242

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = -2

Query: 363 GLFGS--SEGVTVPSDGGQSEHSSPS 292
           G +GS  SEG+  PSD  +S HSSP+
Sbjct: 95  GNYGSNVSEGLNYPSDSNKSVHSSPN 120

>TOP1_THEAC (Q9HM08) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 770

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 294 SELMRRWLGTEHYVRVIITYPV*LVRRVTPSRSVATY 184
           S+  +R+LG  +Y +  +TYP+  + R+T +  V  Y
Sbjct: 685 SKYGKRFLGCSNYPKCTVTYPLPQMGRITKTGEVCPY 721

>VEGFA_CANFA (Q9MYV3) Vascular endothelial growth factor A precursor (VEGF-A)|
           (Vascular permeability factor) (VPF)
          Length = 214

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 79  EHRPHPKIPFTCVHTRSH-RPILTLI 153
           EH+PH  + F  V+ RS+ RPI TL+
Sbjct: 33  EHKPHEVVKFMDVYQRSYCRPIETLV 58

>KIN20_CAEEL (Q20471) Casein kinase I isoform delta (EC 2.7.11.1) (Protein|
           kinase 20)
          Length = 497

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 375 PRHDGLFGSSEGVTVPSDGGQSEHSSPSELMRRWLGTEHYVRVIITYPV 229
           P    + G  E + +PS  G  E +    LM +  G  H  R++  +PV
Sbjct: 34  PGETAVIGGPEALLLPSGSGPEEMNRHPLLMAQAHGEHHQPRLLHNFPV 82

>CRSP3_HUMAN (Q9ULK4) CRSP complex subunit 3 (Cofactor required for Sp1|
           transcriptional activation subunit 3) (Transcriptional
           coactivator CRSP130) (Vitamin D3 receptor-interacting
           protein complex 130 kDa component) (DRIP130)
           (Activator-recruited cofactor
          Length = 1368

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 364 WVVRFIGGRHCPKR 323
           W+V+FI G+H PKR
Sbjct: 62  WIVKFIHGQHSPKR 75

>COPIA_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains: Copia VLP|
           protein; Copia protease (EC 3.4.23.-)]
          Length = 1409

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 7   MQLHCPAGQSCTHNESASTGYKQEEHRPHPKIPFTCVHTRSHRPI 141
           ++L C   + C + + A   +KQ + + H K P   VH+    PI
Sbjct: 448 LELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPI 492


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,486,361
Number of Sequences: 219361
Number of extensions: 1120445
Number of successful extensions: 2764
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2751
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)