Clone Name | rbart52c05 |
---|---|
Clone Library Name | barley_pub |
>CER1_HUMAN (O95813) Cerberus precursor (Cerberus-related protein)| Length = 267 Score = 32.0 bits (71), Expect = 0.40 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -1 Query: 319 FNPGSDAMVEPLEEMVSDERPARYDAYNWGHFFSTRK 209 F PG+ ++++P++ M ++ P R +A + H F RK Sbjct: 105 FPPGTQSLIQPIDGMKMEKSPLREEAKKFWHHFMFRK 141
>GAOX1_ORYSA (P93771) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20| oxidase 1) (GA 20-oxidase 1) (Os20ox) Length = 372 Score = 30.8 bits (68), Expect = 0.89 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 Query: 325 YFFNPGSDAMVEPLEEMVSDERPARYDAYNW 233 +F P D +V P EE+V D P Y + W Sbjct: 305 FFLCPEMDTVVRPPEELVDDHHPRVYPDFTW 335
>MATK_DROLU (Q5J2U8) Maturase K (Intron maturase)| Length = 514 Score = 29.3 bits (64), Expect = 2.6 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -1 Query: 250 YDAYNWGHFFSTRKNSNFKK 191 Y+++NW FFS +KN +F K Sbjct: 183 YESHNWNSFFSLKKNISFLK 202
>ACCO_DENCR (Q9ZQZ1) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDE 263 F+NPGSDA++ P E+V E Sbjct: 248 FYNPGSDAVIFPAPELVEKE 267
>ACCO_PERAE (P19464) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) (Ripening-related protein PAVOE3) Length = 320 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDERPARYDAY 239 F+NPGSDA++ P +V E + + Y Sbjct: 251 FYNPGSDAVIFPAPALVEKEAEEKKEVY 278
>ACCO1_ORYSA (Q40634) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 322 Score = 28.9 bits (63), Expect = 3.4 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDE 263 F+NPGSDA++ P +V +E Sbjct: 256 FYNPGSDAVISPAPALVKEE 275
>ACCO_PRUMU (Q9MB94) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 28.5 bits (62), Expect = 4.4 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDERPARYDAY 239 F+NPGSDA++ P +V E + Y Sbjct: 250 FYNPGSDAVIYPAPTLVEKEAEEKNQVY 277
>YR224_MIMIV (Q5UQB7) Putative BTB/POZ domain-containing protein R224| Length = 540 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +2 Query: 122 ESAKIHSKVELSEVCDLYVFDV 187 E + IH+K+ VCD+YV+D+ Sbjct: 206 EFSSIHNKIIYHHVCDIYVYDL 227
>ACCO1_LYCES (P05116) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein pTOM 13) Length = 315 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDERPARYDAY 239 F+NPGSDA++ P + +V E Y Sbjct: 250 FYNPGSDAVIYPAKTLVEKEAEESTQVY 277
>ACCO_ACTCH (P31237) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDERPARYDAY 239 F+NPGSDA++ P +V E + Y Sbjct: 250 FYNPGSDAVMYPAPALVDKEEDQQKQVY 277
>ACCO1_PETHY (Q08506) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDERPARYDAY 239 F+NPGSDA++ P +V E Y Sbjct: 250 FYNPGSDAVIYPAPALVEKEAEENKQVY 277
>ACCO1_ARATH (Q06588) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 323 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = -1 Query: 322 FFNPGSDAMVEPLEEMVSDE 263 F+NPGSD+++ P E++ E Sbjct: 251 FYNPGSDSVIFPAPELIGKE 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,147,007 Number of Sequences: 219361 Number of extensions: 499396 Number of successful extensions: 1291 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1291 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)