ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart52b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 6e-46
2ref|NM_191252.1| Oryza sativa (japonica cultivar-group), predic... 111 2e-21
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
4dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
5dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
6gb|AC102907.11| Mus musculus chromosome 1, clone RP24-291E1, com... 46 0.081
7gb|AC164068.2| Mus musculus chromosome 1, clone RP23-5H15, compl... 46 0.081
8gb|AY525548.1| Homo sapiens cyclin-dependent kinase-like 1 (CDC2... 44 0.32
9gb|AC007057.3|AC007057 Homo sapiens chromosome 14 clone containi... 44 0.32
10emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-2... 44 0.32
11emb|AL049872.3|CNS0000R Human chromosome 14 DNA sequence BAC R-5... 44 0.32
12gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, com... 42 1.3
13gb|AC125583.3| Rattus norvegicus 4 BAC CH230-1A7 (Children's Hos... 42 1.3
14gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, com... 42 1.3
15gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, co... 42 1.3
16gb|AC094253.7| Rattus norvegicus 4 BAC CH230-3E12 (Children's Ho... 42 1.3
17emb|AL390125.23| Human DNA sequence from clone RP11-43O2 on chro... 42 1.3
18emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chr... 42 1.3
19emb|AL078595.12|HSDJ399J4 Human DNA sequence from clone RP3-399J... 42 1.3
20emb|AL035424.8|HS22D12 Human DNA sequence from clone RP6-22D12 o... 42 1.3
21gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, co... 42 1.3
22emb|AL663110.6| Mouse DNA sequence from clone RP23-224P22 on chr... 42 1.3
23gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cance... 42 1.3
24gb|AC016526.6|AC016526 Homo sapiens chromosome 14 clone RP11-361... 42 1.3
25ref|XM_320176.2| Anopheles gambiae str. PEST ENSANGP00000011215 ... 42 1.3
26ref|NM_100534.2| Arabidopsis thaliana 3-hydroxyisobutyryl-CoA hy... 40 5.0
27gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosom... 40 5.0
28gb|AC115691.8| Mus musculus chromosome 18, clone RP24-286B14, co... 40 5.0
29ref|XM_516979.1| PREDICTED: Pan troglodytes synapse-associated p... 40 5.0
30gb|AC161799.5| Mus musculus chromosome 15, clone RP23-304B13, co... 40 5.0
31gb|AC093336.13| Mus musculus chromosome 1, clone RP23-40E2, comp... 40 5.0
32gb|AC147251.3| Mus musculus BAC clone RP24-114L16 from chromosom... 40 5.0
33gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, co... 40 5.0
34gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p... 40 5.0
35gb|AC128665.4| Mus musculus BAC clone RP24-141K21 from chromosom... 40 5.0
36gb|AC125157.4| Mus musculus BAC clone RP24-390G17 from chromosom... 40 5.0
37emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 o... 40 5.0
38emb|AL683842.11| Human DNA sequence from clone RP11-47G11 on chr... 40 5.0
39emb|AL512415.11| Human DNA sequence from clone RP11-21O23 on chr... 40 5.0
40emb|AL162720.8| Human DNA sequence from clone RP1-132N8 on chrom... 40 5.0
41emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001 40 5.0
42gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, co... 40 5.0
43emb|AL589737.11| Mouse DNA sequence from clone RP23-43L14 on chr... 40 5.0
44gb|AC097064.2| Homo sapiens chromosome 1 clone RP11-524L19, comp... 40 5.0
45gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Can... 40 5.0
46gb|AC103864.2| Homo sapiens chromosome 8, clone RP11-192P9, comp... 40 5.0
47gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, co... 40 5.0
48gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, co... 40 5.0
49gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, comp... 40 5.0
50gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence 40 5.0
51dbj|AK221578.1| Arabidopsis thaliana mRNA for 3-hydroxyisobutyry... 40 5.0
52gb|AC019246.6|AC019246 Homo sapiens, clone RP11-2K18, complete s... 40 5.0
53gb|BT022051.1| Arabidopsis thaliana At1g06550 gene, complete cds 40 5.0
54dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CC... 40 5.0
55gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, comple... 40 5.0
56gb|AC006475.3|AC006475 Homo sapiens PAC clone RP4-727L20 from 7q... 40 5.0
57emb|BX005083.10| Zebrafish DNA sequence from clone CH211-220F13 ... 40 5.0
58emb|AJ297052.1|HSA297052 Homo sapiens SDS-stable vimentin-bound ... 40 5.0
59dbj|AP005365.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.0
60gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, compl... 40 5.0
61gb|AC148011.3| Mus musculus BAC clone RP23-202I21 from 18, compl... 40 5.0
62emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chr... 40 5.0 
>dbj|AK069590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019I11, full
            insert sequence
          Length = 1482

 Score =  192 bits (97), Expect = 6e-46
 Identities = 166/189 (87%)
 Strand = Plus / Minus

                                                                        
Query: 188  catagaccgtgtgctcgtatttgccgctccacctgttggaatcatcagatgggacctgga 247
            ||||||| ||||||||  ||||||| ||||| ||||||||||| ||||||||||| ||||
Sbjct: 1312 catagactgtgtgctcaaatttgccactccatctgttggaatcgtcagatgggacttgga 1253

                                                                        
Query: 248  gctcatgttctgagctgaatggttcgaaaacacggtcaatgtcttcattcttcacctctt 307
            |||| | |||||| |||||||||||||||| |||||| ||||| || ||||| ||||| |
Sbjct: 1252 gctccttttctgaactgaatggttcgaaaagacggtcgatgtcctcgttcttgacctcct 1193

                                                                        
Query: 308  caatggttgcgggactccacttaggtgcattgtctttgtcgatactcagagctctaatac 367
            ||| ||| || |||||||||||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 1192 caagggtagcaggactccacttaggggcattgtctttgtcgatgctgagagctctaattc 1133

                     
Query: 368  cctcataga 376
            |||||||||
Sbjct: 1132 cctcataga 1124
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>ref|NM_191252.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 411

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Minus

                                                                       
Query: 217 cacctgttggaatcatcagatgggacctggagctcatgttctgagctgaatggttcgaaa 276
           |||||||||||||| ||||||||||| |||||||| | |||||| |||||||||||||||
Sbjct: 410 cacctgttggaatcgtcagatgggacttggagctccttttctgaactgaatggttcgaaa 351

                                                               
Query: 277 acacggtcaatgtcttcattcttcacctcttcaatggttgcgggactccact 328
           | |||||| ||||| || ||||| ||||| |||| ||| || ||||||||||
Sbjct: 350 agacggtcgatgtcctcgttcttgacctcctcaagggtagcaggactccact 299
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                            
Query: 217      cacctgttggaatcatcagatgggacctggagctcatgttctgagctgaatggttcgaaa 276
                |||||||||||||| ||||||||||| |||||||| | |||||| |||||||||||||||
Sbjct: 31546465 cacctgttggaatcgtcagatgggacttggagctccttttctgaactgaatggttcgaaa 31546524

                                                                    
Query: 277      acacggtcaatgtcttcattcttcacctcttcaatggttgcgggactccact 328
                | |||||| ||||| || ||||| ||||| |||| ||| || ||||||||||
Sbjct: 31546525 agacggtcgatgtcctcgttcttgacctcctcaagggtagcaggactccact 31546576



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 327      cttaggtgcattgtctttgtcgatactcagagctctaataccct 370
                |||||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 31546653 cttaggggcattgtctttgtcgatgctgagagctctaattccct 31546696
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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435B05
          Length = 150997

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                         
Query: 217   cacctgttggaatcatcagatgggacctggagctcatgttctgagctgaatggttcgaaa 276
             |||||||||||||| ||||||||||| |||||||| | |||||| |||||||||||||||
Sbjct: 59488 cacctgttggaatcgtcagatgggacttggagctccttttctgaactgaatggttcgaaa 59547

                                                                 
Query: 277   acacggtcaatgtcttcattcttcacctcttcaatggttgcgggactccact 328
             | |||||| ||||| || ||||| ||||| |||| ||| || ||||||||||
Sbjct: 59548 agacggtcgatgtcctcgttcttgacctcctcaagggtagcaggactccact 59599



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 327   cttaggtgcattgtctttgtcgatactcagagctctaataccct 370
             |||||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 59676 cttaggggcattgtctttgtcgatgctgagagctctaattccct 59719
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>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046E05
          Length = 162776

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                          
Query: 217    cacctgttggaatcatcagatgggacctggagctcatgttctgagctgaatggttcgaaa 276
              |||||||||||||| ||||||||||| |||||||| | |||||| |||||||||||||||
Sbjct: 140529 cacctgttggaatcgtcagatgggacttggagctccttttctgaactgaatggttcgaaa 140588

                                                                  
Query: 277    acacggtcaatgtcttcattcttcacctcttcaatggttgcgggactccact 328
              | |||||| ||||| || ||||| ||||| |||| ||| || ||||||||||
Sbjct: 140589 agacggtcgatgtcctcgttcttgacctcctcaagggtagcaggactccact 140640



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 327    cttaggtgcattgtctttgtcgatactcagagctctaataccct 370
              |||||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 140717 cttaggggcattgtctttgtcgatgctgagagctctaattccct 140760
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>gb|AC102907.11| Mus musculus chromosome 1, clone RP24-291E1, complete sequence
          Length = 185121

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 243   ctggagctcatgttctgagctga 265
             |||||||||||||||||||||||
Sbjct: 19620 ctggagctcatgttctgagctga 19598
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>gb|AC164068.2| Mus musculus chromosome 1, clone RP23-5H15, complete sequence
          Length = 178006

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 243    ctggagctcatgttctgagctga 265
              |||||||||||||||||||||||
Sbjct: 116584 ctggagctcatgttctgagctga 116606
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>gb|AY525548.1| Homo sapiens cyclin-dependent kinase-like 1 (CDC2-related kinase)
             (CDKL1) gene, complete cds
          Length = 69779

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 98    gcatgtcacatggcaaaaccaa 119
             ||||||||||||||||||||||
Sbjct: 27104 gcatgtcacatggcaaaaccaa 27083
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>gb|AC007057.3|AC007057 Homo sapiens chromosome 14 clone containing genes for UP50 and Trip230,
              complete sequence
          Length = 171901

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 10     aaatctcagttgctttattgct 31
              ||||||||||||||||||||||
Sbjct: 126389 aaatctcagttgctttattgct 126368
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>emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-247L20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168193

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 98     gcatgtcacatggcaaaaccaa 119
              ||||||||||||||||||||||
Sbjct: 119958 gcatgtcacatggcaaaaccaa 119979
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>emb|AL049872.3|CNS0000R Human chromosome 14 DNA sequence BAC R-529H20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172674

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 10    aaatctcagttgctttattgct 31
             ||||||||||||||||||||||
Sbjct: 57633 aaatctcagttgctttattgct 57612
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>gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, complete sequence
          Length = 240081

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   cagcctgggctatgtggtgat 171
             |||||||||||||||||||||
Sbjct: 13665 cagcctgggctatgtggtgat 13685
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>gb|AC125583.3| Rattus norvegicus 4 BAC CH230-1A7 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 205786

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    tgcactcaaacatgcatgtca 105
             |||||||||||||||||||||
Sbjct: 72742 tgcactcaaacatgcatgtca 72722
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>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence
          Length = 205816

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    atgtcttcattcttcacctct 306
              |||||||||||||||||||||
Sbjct: 189020 atgtcttcattcttcacctct 189040
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>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence
          Length = 178775

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   cagcctgggctatgtggtgat 171
             |||||||||||||||||||||
Sbjct: 15899 cagcctgggctatgtggtgat 15879
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>gb|AC094253.7| Rattus norvegicus 4 BAC CH230-3E12 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209550

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     tgcactcaaacatgcatgtca 105
              |||||||||||||||||||||
Sbjct: 164032 tgcactcaaacatgcatgtca 164012
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>emb|AL390125.23| Human DNA sequence from clone RP11-43O2 on chromosome 6, complete
             sequence
          Length = 140782

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    catgcatgtcacatggcaaaa 115
             |||||||||||||||||||||
Sbjct: 54131 catgcatgtcacatggcaaaa 54151
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>emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chromosome 10 Contains the
              cathepsin L-like 1 (CTSLL1) pseudogene, a novel gene, a
              pseudogene similar to part of ring finger protein 3 (RNF3),
              the 5' end of the MINPP1 gene for multiple inositol
              polyphosphate histidine phosphatase 1 and a CpG island,
              complete sequence
          Length = 173390

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     catgcatgtcacatggcaaaa 115
              |||||||||||||||||||||
Sbjct: 116724 catgcatgtcacatggcaaaa 116744
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>emb|AL078595.12|HSDJ399J4 Human DNA sequence from clone RP3-399J4 on chromosome 6q15-16.3
             Contains a cytochrome B pseudogene and a ribosomal protein
             (RPL7A) pseudogene, complete sequence
          Length = 124280

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    gcatgtcacatggcaaaacca 118
             |||||||||||||||||||||
Sbjct: 80995 gcatgtcacatggcaaaacca 80975
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>emb|AL035424.8|HS22D12 Human DNA sequence from clone RP6-22D12 on chromosome Xq21.1-21.33
            Contains part of the KLHL4 gene for kelch-like 4
            (Drosophila), complete sequence
          Length = 69827

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 93   aacatgcatgtcacatggcaa 113
            |||||||||||||||||||||
Sbjct: 8659 aacatgcatgtcacatggcaa 8679
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>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence
          Length = 176135

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 150   acagcctgggctatgtggtga 170
             |||||||||||||||||||||
Sbjct: 88204 acagcctgggctatgtggtga 88224
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>emb|AL663110.6| Mouse DNA sequence from clone RP23-224P22 on chromosome 11 Contains
             part of the Abca13 gene for ATP-binding cassette
             sub-family A (ABC1) member 13, complete sequence
          Length = 158039

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   cagcctgggctatgtggtgat 171
             |||||||||||||||||||||
Sbjct: 18707 cagcctgggctatgtggtgat 18727
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>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 203618

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 286    atgtcttcattcttcacctct 306
              |||||||||||||||||||||
Sbjct: 161080 atgtcttcattcttcacctct 161060
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>gb|AC016526.6|AC016526 Homo sapiens chromosome 14 clone RP11-361H10 map 14q24.3, complete
              sequence
          Length = 179984

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     catgcatgtcacatggcaaaa 115
              |||||||||||||||||||||
Sbjct: 138062 catgcatgtcacatggcaaaa 138042
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>ref|XM_320176.2| Anopheles gambiae str. PEST ENSANGP00000011215
           (ENSANGG00000008726), partial mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 tcgtatttgccgctccacctg 222
           |||||||||||||||||||||
Sbjct: 524 tcgtatttgccgctccacctg 544
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>ref|NM_100534.2| Arabidopsis thaliana 3-hydroxyisobutyryl-CoA hydrolase/ catalytic
            AT1G06550 mRNA, complete cds
          Length = 1344

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 323  tccacttaggtgcattgtctttgtcgatactcagagctctaataccctcata 374
            ||||||| || | |||||||||||| ||  ||||||| || |||||||||||
Sbjct: 1009 tccactttggagaattgtctttgtctatggtcagagcccttataccctcata 958
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>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence
          Length = 189243

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 24793 cagcctgggctatgtggtga 24774
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>gb|AC115691.8| Mus musculus chromosome 18, clone RP24-286B14, complete sequence
          Length = 175016

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    cagcctgggctatgtggtga 170
              ||||||||||||||||||||
Sbjct: 140070 cagcctgggctatgtggtga 140051
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>ref|XM_516979.1| PREDICTED: Pan troglodytes synapse-associated protein 97
           (LOC460968), mRNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 cttcattcttcacctcttca 309
           ||||||||||||||||||||
Sbjct: 163 cttcattcttcacctcttca 144
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>gb|AC161799.5| Mus musculus chromosome 15, clone RP23-304B13, complete sequence
          Length = 188284

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    cacttaggtgcattgtcttt 344
              ||||||||||||||||||||
Sbjct: 163495 cacttaggtgcattgtcttt 163476
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>gb|AC093336.13| Mus musculus chromosome 1, clone RP23-40E2, complete sequence
          Length = 225053

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    cagcctgggctatgtggtga 170
              ||||||||||||||||||||
Sbjct: 212183 cagcctgggctatgtggtga 212202
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>gb|AC147251.3| Mus musculus BAC clone RP24-114L16 from chromosome 18, complete
             sequence
          Length = 177962

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 47778 cagcctgggctatgtggtga 47797
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>gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, complete sequence
          Length = 220804

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    cagcctgggctatgtggtga 170
              ||||||||||||||||||||
Sbjct: 164916 cagcctgggctatgtggtga 164935
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>gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p11-q21.1, complete
             sequence
          Length = 190711

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 95724 cagcctgggctatgtggtga 95705
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>gb|AC128665.4| Mus musculus BAC clone RP24-141K21 from chromosome 18, complete
             sequence
          Length = 183285

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 95296 cagcctgggctatgtggtga 95315
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>gb|AC125157.4| Mus musculus BAC clone RP24-390G17 from chromosome 18, complete sequence
          Length = 207265

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    cagcctgggctatgtggtga 170
              ||||||||||||||||||||
Sbjct: 192938 cagcctgggctatgtggtga 192919
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>emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 on chromosome 22, complete
             sequence
          Length = 87869

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 20367 cagcctgggctatgtggtga 20348
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>emb|AL683842.11| Human DNA sequence from clone RP11-47G11 on chromosome 10 Contains the
              gene for B cell RAG associated protein (GALNAC4S-6ST)
              (BRAG, KIAA0598), a novel pseudogene and three CpG islands,
              complete sequence
          Length = 149244

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     aaacatgcatgtcacatggcaaaa 115
              |||| |||||||||||||||||||
Sbjct: 124830 aaacttgcatgtcacatggcaaaa 124807
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>emb|AL512415.11| Human DNA sequence from clone RP11-21O23 on chromosome 6, complete
             sequence
          Length = 35786

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 16894 cagcctgggctatgtggtga 16913
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>emb|AL162720.8| Human DNA sequence from clone RP1-132N8 on chromosome 6 Contains a
            pseudogene of the likely ortholog of mouse suppressors of
            cytokine signalling 5 (SOCS5, CIS6, CISH6, KIAA0761),
            complete sequence
          Length = 57355

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 92   aaacatgcatgtcacatggcaaaa 115
            ||||||| ||||||||||||||||
Sbjct: 6828 aaacatggatgtcacatggcaaaa 6805
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>emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001
          Length = 281116

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    cagcctgggctatgtggtga 170
              ||||||||||||||||||||
Sbjct: 144304 cagcctgggctatgtggtga 144285
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>gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, complete sequence
          Length = 154644

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  tgttggaatcatcagatggg 240
            ||||||||||||||||||||
Sbjct: 5431 tgttggaatcatcagatggg 5450
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>emb|AL589737.11| Mouse DNA sequence from clone RP23-43L14 on chromosome 13, complete
             sequence
          Length = 202855

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 90624 cagcctgggctatgtggtga 90605
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>gb|AC097064.2| Homo sapiens chromosome 1 clone RP11-524L19, complete sequence
          Length = 183425

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 36254 cagcctgggctatgtggtga 36235
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>gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188709

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   cttcattcttcacctcttca 309
             ||||||||||||||||||||
Sbjct: 15507 cttcattcttcacctcttca 15526
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>gb|AC103864.2| Homo sapiens chromosome 8, clone RP11-192P9, complete sequence
          Length = 164867

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 98     gcatgtcacatggcaaaaccaata 121
              |||||||||||||||||| |||||
Sbjct: 131438 gcatgtcacatggcaaaagcaata 131461
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>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence
          Length = 171700

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    tgttggaatcatcagatggg 240
              ||||||||||||||||||||
Sbjct: 121225 tgttggaatcatcagatggg 121206
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>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence
          Length = 149542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    aaacatgcatgtcacatggcaaaa 115
             ||||| ||||||||||||||||||
Sbjct: 26560 aaacaggcatgtcacatggcaaaa 26537
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>gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, complete sequence
          Length = 239704

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    cagcctgggctatgtggtga 170
              ||||||||||||||||||||
Sbjct: 216659 cagcctgggctatgtggtga 216640
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>gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence
          Length = 149951

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     aaacatgcatgtcacatggcaaaa 115
              ||||| ||||||||||||||||||
Sbjct: 145302 aaacaggcatgtcacatggcaaaa 145279
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>dbj|AK221578.1| Arabidopsis thaliana mRNA for 3-hydroxyisobutyryl-coenzyme A
            hydrolase, complete cds, clone: RAFL07-83-C04
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 323  tccacttaggtgcattgtctttgtcgatactcagagctctaataccctcata 374
            ||||||| || | |||||||||||| ||  ||||||| || |||||||||||
Sbjct: 1066 tccactttggagaattgtctttgtctatggtcagagcccttataccctcata 1015
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>gb|AC019246.6|AC019246 Homo sapiens, clone RP11-2K18, complete sequence
          Length = 154984

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 98     gcatgtcacatggcaaaaccaata 121
              |||||||||||||||||| |||||
Sbjct: 143649 gcatgtcacatggcaaaagcaata 143672
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>gb|BT022051.1| Arabidopsis thaliana At1g06550 gene, complete cds
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 323  tccacttaggtgcattgtctttgtcgatactcagagctctaataccctcata 374
            ||||||| || | |||||||||||| ||  ||||||| || |||||||||||
Sbjct: 1024 tccactttggagaattgtctttgtctatggtcagagcccttataccctcata 973
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>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7,
              LRRC2), complete cds, clone: 0475A03
          Length = 165558

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     attgcttagtttatagtatt 45
              ||||||||||||||||||||
Sbjct: 106620 attgcttagtttatagtatt 106601
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>gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, complete sequence
          Length = 148332

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    aaacatgcatgtcacatggcaaaa 115
             ||||| ||||||||||||||||||
Sbjct: 40850 aaacaagcatgtcacatggcaaaa 40827
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>gb|AC006475.3|AC006475 Homo sapiens PAC clone RP4-727L20 from 7q36, complete sequence
          Length = 69684

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 39193 cagcctgggctatgtggtga 39174
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>emb|BX005083.10| Zebrafish DNA sequence from clone CH211-220F13 in linkage group 2,
              complete sequence
          Length = 212081

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    catggcaaaaccaatatgtc 125
              ||||||||||||||||||||
Sbjct: 105159 catggcaaaaccaatatgtc 105178
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>emb|AJ297052.1|HSA297052 Homo sapiens SDS-stable vimentin-bound DNA fragment HEF42VIM12
          Length = 1136

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 92   aaacatgcatgtcacatggcaaaa 115
            ||||| ||||||||||||||||||
Sbjct: 1063 aaacaagcatgtcacatggcaaaa 1086
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>dbj|AP005365.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB52G8, complete
             sequence
          Length = 103221

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 98    gcatgtcacatggcaaaaccaata 121
             |||||||||||||||||| |||||
Sbjct: 30284 gcatgtcacatggcaaaagcaata 30307
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>gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, complete sequence
          Length = 191966

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 69775 cagcctgggctatgtggtga 69794
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>gb|AC148011.3| Mus musculus BAC clone RP23-202I21 from 18, complete sequence
          Length = 220253

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 59533 cagcctgggctatgtggtga 59514
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>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete
             sequence
          Length = 95219

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cagcctgggctatgtggtga 170
             ||||||||||||||||||||
Sbjct: 38810 cagcctgggctatgtggtga 38829


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,210,343
Number of Sequences: 3902068
Number of extensions: 3210343
Number of successful extensions: 60763
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60643
Number of HSP's gapped (non-prelim): 120
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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