Clone Name | rbart52b04 |
---|---|
Clone Library Name | barley_pub |
>R126B_XENLA (Q6IRP0) RING finger protein 126-B| Length = 312 Score = 34.3 bits (77), Expect = 0.083 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 94 KSLPNTQRYYCHTKHYQLTPRLTRHTC 174 ++LP RY+CH+ ++TPRL +TC Sbjct: 3 EALPEAGRYFCHSCTAEITPRLPEYTC 29
>R126A_XENLA (Q7T0Q3) RING finger protein 126-A| Length = 312 Score = 34.3 bits (77), Expect = 0.083 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 94 KSLPNTQRYYCHTKHYQLTPRLTRHTC 174 ++LP RY+CH+ ++TPRL +TC Sbjct: 3 EALPKAGRYFCHSCTAEITPRLPEYTC 29
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 32.0 bits (71), Expect = 0.41 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 Query: 90 PKVPTEHTTVLLPHKTLPADSETNTPHLLVLQTRTP 197 P +PTE TT+ T+P + T +P L + T P Sbjct: 927 PTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKP 962 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +3 Query: 69 LALVAPAPKVPTEHTTVLLPHKTLPADSETNTPHLLVLQTRTP 197 L + P +P E TT+ T+P + T +P + T P Sbjct: 878 LTIPTEKPTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKP 920
>RN126_XENTR (Q6DIP3) RING finger protein 126| Length = 311 Score = 32.0 bits (71), Expect = 0.41 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 94 KSLPNTQRYYCHTKHYQLTPRLTRHTC 174 ++LP RY+CH+ ++ PRL +TC Sbjct: 3 EALPEAGRYFCHSCTAEIIPRLPEYTC 29
>CJ053_HUMAN (Q8N6V4) Protein C10orf53| Length = 157 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +1 Query: 118 YYCHTKHYQ---LTPRLTRHTCSYYRLAHHGHTSPCSSRASP 234 ++C+ K + LTP + T S RL H +SPC + SP Sbjct: 63 FHCNIKDLEFGKLTPSSDKRTTSSSRLTFHQLSSPCGMKVSP 104
>YAY8_SCHPO (Q10216) Hypothetical oxidoreductase C4H3.08 in chromosome I (EC| 1.-.-.-) Length = 286 Score = 30.0 bits (66), Expect = 1.6 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = -3 Query: 290 SGQILHPNGGTIVNS 246 +GQ LHPNGGT++N+ Sbjct: 272 TGQTLHPNGGTVINN 286
>SLAP2_CLOTM (Q06853) Cell surface glycoprotein 2 precursor (S-layer protein 2)| Length = 688 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 78 VAPAPKVPTEHTTVLLPHKTLPADSETNTPHLLVLQTRTP 197 V P+VPT+ T P T P+ + T TP ++TP Sbjct: 368 VISEPEVPTQTPTQTPPTTTAPSQTPTQTPPTTTAPSQTP 407
>F13B_HUMAN (P05160) Coagulation factor XIII B chain precursor| (Protein-glutamine gamma-glutamyltransferase B chain) (Transglutaminase B chain) (Fibrin-stabilizing factor B subunit) Length = 661 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 109 TQRYYCHTKHYQLTPRLTRHTCSYYRLAHHGHTSP 213 T+ C T + LTP+ T+ CS RL +G+ P Sbjct: 192 TEEVECLTYGWSLTPKCTKLKCSSLRLIENGYFHP 226
>SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1068 Score = 28.5 bits (62), Expect = 4.6 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -3 Query: 89 RWSHEGKRQTLNKIM 45 RWSH+G RQT+ K+M Sbjct: 885 RWSHDGARQTIAKLM 899
>ZAN_PIG (Q28983) Zonadhesin precursor| Length = 2476 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +3 Query: 90 PKVPTEHTTVLLPHKTLPADSETNTPHLLVLQTRTP 197 P VPTE TT+ T+P + T L + T P Sbjct: 476 PMVPTERTTIPTERTTIPTEKPTVPTEKLTVPTEKP 511
>FNBA_STAAU (P14738) Fibronectin-binding protein precursor (FNBP)| Length = 1018 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 84 PAPKVPTEHTTVLLPHKTLPADSETNTP 167 P P+VP+E T P +P++ ET TP Sbjct: 896 PTPEVPSEPETPTPPTPEVPSEPETPTP 923 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 84 PAPKVPTEHTTVLLPHKTLPADSETNTP 167 P P+VP+E T P +P++ ET TP Sbjct: 882 PTPEVPSEPETPTPPTPEVPSEPETPTP 909
>YKK2_YEAST (P34249) Hypothetical 11.4 kDa protein in APE1/LAP4-CWP1 intergenic| region Length = 101 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 Query: 205 CARGVRVCSTSKCGVLVSESAGSVLCGSSTVVC 107 C+ GV +CS S CG LV VL + VC Sbjct: 16 CSFGVLLCSGSNCGRLVGSERRKVLYVFNVNVC 48
>TNR18_MOUSE (O35714) Tumor necrosis factor receptor superfamily member 18| precursor (Glucocorticoid-induced TNFR-related protein) Length = 228 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 151 ESAGSVLCGSSTVVCSVGTFGAG 83 ES G ++ G V C++GTF AG Sbjct: 89 ESQGDIVFGFRCVACAMGTFSAG 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,291,309 Number of Sequences: 219361 Number of extensions: 820971 Number of successful extensions: 2577 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2577 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)