>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  129 bits (65), Expect = 7e-27
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                           
Query: 248     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2976971 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2976912

                                                                           
Query: 308     acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
               | ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||
Sbjct: 2976911 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2976852

                
Query: 368     g 368
               |
Sbjct: 2976851 g 2976851



 Score =  129 bits (65), Expect = 7e-27
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                           
Query: 248     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2948575 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2948516

                                                                           
Query: 308     acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
               | ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||
Sbjct: 2948515 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2948456

                
Query: 368     g 368
               |
Sbjct: 2948455 g 2948455



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 299     ctctgctgcacgaagccgacgacgta 324
               ||||||||||||| ||||||||||||
Sbjct: 2941843 ctctgctgcacgatgccgacgacgta 2941818

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15,
              complete sequence
          Length = 166282

 Score =  129 bits (65), Expect = 7e-27
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                          
Query: 248    agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
              ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 114458 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 114399

                                                                          
Query: 308    acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
              | ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||
Sbjct: 114398 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 114339

               
Query: 368    g 368
              |
Sbjct: 114338 g 114338



 Score =  129 bits (65), Expect = 7e-27
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                         
Query: 248   agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
             ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 86062 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 86003

                                                                         
Query: 308   acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
             | ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||
Sbjct: 86002 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 85943

              
Query: 368   g 368
             |
Sbjct: 85942 g 85942



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 299   ctctgctgcacgaagccgacgacgta 324
             ||||||||||||| ||||||||||||
Sbjct: 79330 ctctgctgcacgatgccgacgacgta 79305

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  129 bits (65), Expect = 7e-27
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                           
Query: 248     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2977082 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2977023

                                                                           
Query: 308     acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
               | ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||
Sbjct: 2977022 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2976963

                
Query: 368     g 368
               |
Sbjct: 2976962 g 2976962



 Score =  129 bits (65), Expect = 7e-27
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                           
Query: 248     agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
               ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 2948686 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2948627

                                                                           
Query: 308     acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
               | ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||
Sbjct: 2948626 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2948567

                
Query: 368     g 368
               |
Sbjct: 2948566 g 2948566



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 299     ctctgctgcacgaagccgacgacgta 324
               ||||||||||||| ||||||||||||
Sbjct: 2941954 ctctgctgcacgatgccgacgacgta 2941929

>dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A09, full
            insert sequence
          Length = 1661

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                        
Query: 248  agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 307
            ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| 
Sbjct: 1274 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 1215

                                                                        
Query: 308  acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 367
            | ||||||||||||||| || ||||||  |||||||||| ||||||||| || |||||||
Sbjct: 1214 atgaagccgacgacgtaggccgccgtggtcagccggatgccgcgccaccgcctctcctcg 1155

             
Query: 368  g 368
            |
Sbjct: 1154 g 1154

>dbj|AK106420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B02, full
            insert sequence
          Length = 1590

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 299  ctctgctgcacgaagccgacgacgta 324
            ||||||||||||| ||||||||||||
Sbjct: 1359 ctctgctgcacgatgccgacgacgta 1334

>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      aaaaggaaacaaatcttaaag 24
              |||||||||||||||||||||
Sbjct: 166903 aaaaggaaacaaatcttaaag 166923

>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
             sequence
          Length = 192000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     gaaaaggaaacaaatcttaaa 23
             |||||||||||||||||||||
Sbjct: 20866 gaaaaggaaacaaatcttaaa 20886

>gb|AC147646.2| Gallus gallus BAC clone CH261-13L1 from chromosome unknown, complete
              sequence
          Length = 238934

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 55     tgtaagataattatttcacat 75
              |||||||||||||||||||||
Sbjct: 170214 tgtaagataattatttcacat 170234

>gb|AC163351.2| Mus musculus BAC clone RP23-150D4 from chromosome 13, complete sequence
          Length = 214062

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 69     ttcacatctggatctgatagcaga 92
              ||||||||||||||||| ||||||
Sbjct: 104873 ttcacatctggatctgaaagcaga 104896

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgtagtcggccatgtcgaccatca 239
               |||||| |||||||||||||||||
Sbjct: 3121354 cgtagtgggccatgtcgaccatca 3121377

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    cgtagtcggccatgtcgaccatca 239
              |||||| |||||||||||||||||
Sbjct: 811765 cgtagtgggccatgtcgaccatca 811742

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgtagtcggccatgtcgaccatca 239
               |||||| |||||||||||||||||
Sbjct: 2666685 cgtagtgggccatgtcgaccatca 2666708

>gb|AC122402.2| Mus musculus BAC clone RP24-108B4 from chromosome 13, complete sequence
          Length = 175669

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     ttcacatctggatctgatagcaga 92
              ||||||||||||||||| ||||||
Sbjct: 172580 ttcacatctggatctgaaagcaga 172557

>gb|AF496108.1| Lactobacillus delbrueckii subsp. lactis 50s ribosomal protein L19
           gene, partial cds
          Length = 318

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 acgacgtacgcggccgtgac 336
           ||||||||||||||||||||
Sbjct: 143 acgacgtacgcggccgtgac 124

>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24
          Length = 303250

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    cgtagtcggccatgtcgaccatca 239
              |||||| |||||||||||||||||
Sbjct: 230174 cgtagtgggccatgtcgaccatca 230151

>gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, complete sequence
          Length = 155985

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      aaaaggaaacaaatcttaaagagc 27
              ||||||||||||||| ||||||||
Sbjct: 132165 aaaaggaaacaaatcataaagagc 132142

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 333     tgaccagccggatggcgcgc 352
               ||||||||||||||||||||
Sbjct: 1479193 tgaccagccggatggcgcgc 1479174

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       acaaatcttaaagagctttcatcc 35
                ||||||||||||||| ||||||||
Sbjct: 22669535 acaaatcttaaagagatttcatcc 22669512

>emb|BX682231.5| Mouse DNA sequence from clone RP24-369N16 on chromosome 2, complete
            sequence
          Length = 48121

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tttcacatctggatctgata 87
            ||||||||||||||||||||
Sbjct: 8122 tttcacatctggatctgata 8141

>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    acaaatcttaaagagctttcatcc 35
             ||||||||||||||| ||||||||
Sbjct: 87433 acaaatcttaaagagatttcatcc 87410

>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in
             Acinetobacter baumannii
          Length = 100001

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gcatcaaatcgatttgattg 140
             ||||||||||||||||||||
Sbjct: 18406 gcatcaaatcgatttgattg 18387

>emb|AL807800.7| Mouse DNA sequence from clone RP23-438D2 on chromosome 2, complete
             sequence
          Length = 176808

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aattatttcacatctggatc 82
             ||||||||||||||||||||
Sbjct: 53661 aattatttcacatctggatc 53642


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,140,681
Number of Sequences: 3902068
Number of extensions: 3140681
Number of successful extensions: 61953
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61707
Number of HSP's gapped (non-prelim): 246
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)