Clone Name | rbart52a12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 165 bits (83), Expect = 3e-38 Identities = 89/91 (97%) Strand = Plus / Minus Query: 1 ctggtacaatgcaaaaggtagggaaagtagtacagcaggtactatactgactgaaactcc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 ctggtacaatgcaaaaggtagggaaagtagtacagcaggtactatactgactgaaactcg 1153 Query: 61 caaacttgaacaggcgacgctgccggcaggc 91 || |||||||||||||||||||||||||||| Sbjct: 1152 cagacttgaacaggcgacgctgccggcaggc 1122
>emb|CR702474.2|CNS0G4ZA Tetraodon nigroviridis full-length cDNA Length = 969 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR702005.2|CNS0G4M9 Tetraodon nigroviridis full-length cDNA Length = 970 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR701878.2|CNS0G4IQ Tetraodon nigroviridis full-length cDNA Length = 934 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 30 gggaaagtagtacagcaggta 10
>emb|CR700458.2|CNS0G3FA Tetraodon nigroviridis full-length cDNA Length = 965 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR698963.2|CNS0G29R Tetraodon nigroviridis full-length cDNA Length = 969 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR697642.2|CNS0G192 Tetraodon nigroviridis full-length cDNA Length = 961 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 56 gggaaagtagtacagcaggta 36
>emb|CR696608.2|CNS0G0GC Tetraodon nigroviridis full-length cDNA Length = 967 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 62 gggaaagtagtacagcaggta 42
>emb|CR694961.2|CNS0FZ6L Tetraodon nigroviridis full-length cDNA Length = 969 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR693847.2|CNS0FYBN Tetraodon nigroviridis full-length cDNA Length = 964 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 63 gggaaagtagtacagcaggta 43
>emb|CR693583.2|CNS0FY4B Tetraodon nigroviridis full-length cDNA Length = 964 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 63 gggaaagtagtacagcaggta 43
>emb|CR693474.2|CNS0FY1A Tetraodon nigroviridis full-length cDNA Length = 934 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 50 gggaaagtagtacagcaggta 30
>emb|CR690780.2|CNS0FVYG Tetraodon nigroviridis full-length cDNA Length = 967 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 62 gggaaagtagtacagcaggta 42
>emb|CR689984.2|CNS0FVCC Tetraodon nigroviridis full-length cDNA Length = 935 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 30 gggaaagtagtacagcaggta 10
>emb|CR686426.2|CNS0FSLI Tetraodon nigroviridis full-length cDNA Length = 960 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 55 gggaaagtagtacagcaggta 35
>emb|CR685561.2|CNS0FRXH Tetraodon nigroviridis full-length cDNA Length = 961 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 55 gggaaagtagtacagcaggta 35
>emb|CR685520.2|CNS0FRWC Tetraodon nigroviridis full-length cDNA Length = 964 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR684429.2|CNS0FR21 Tetraodon nigroviridis full-length cDNA Length = 975 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gggaaagtagtacagcaggta 41 ||||||||||||||||||||| Sbjct: 68 gggaaagtagtacagcaggta 48
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gaacaggcgacgctgccggc 87 |||||||||||||||||||| Sbjct: 1380459 gaacaggcgacgctgccggc 1380478
>gb|CP000216.1| Drosophila melanogaster genomic scaffold 211000022280782 Length = 122665 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ctgactgaaactcccaaact 66 |||||||||||||||||||| Sbjct: 28495 ctgactgaaactcccaaact 28514
>gb|AC004422.1|AC004422 Drosophila melanogaster (P1 DS08493 (D141)) DNA sequence, complete sequence Length = 77137 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ctgactgaaactcccaaact 66 |||||||||||||||||||| Sbjct: 18548 ctgactgaaactcccaaact 18567
>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence Length = 222889 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acaatgcaaaaggtagggaa 25 |||||||||||||||||||| Sbjct: 94243 acaatgcaaaaggtagggaa 94262
>gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome 3, complete sequence Length = 203513 Score = 38.2 bits (19), Expect = 3.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 32 acagcaggtactatactgactga 54 ||||||| ||||||||||||||| Sbjct: 82257 acagcagatactatactgactga 82279
>gb|AC165252.2| Mus musculus BAC clone RP23-355O12 from chromosome 16, complete sequence Length = 178619 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 aaaaggtagggaaagtagt 31 ||||||||||||||||||| Sbjct: 63147 aaaaggtagggaaagtagt 63165
>gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome 3, complete sequence Length = 165051 Score = 38.2 bits (19), Expect = 3.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 32 acagcaggtactatactgactga 54 ||||||| ||||||||||||||| Sbjct: 26138 acagcagatactatactgactga 26116
>emb|CR932966.2| Medicago truncatula chromosome 5 clone mth2-45l22, COMPLETE SEQUENCE Length = 112211 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tggtacaatgcaaaaggta 20 ||||||||||||||||||| Sbjct: 39741 tggtacaatgcaaaaggta 39723
>gb|AC100781.2| Homo sapiens chromosome 18, clone RP11-124E7, complete sequence Length = 158180 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ctgaaactcccaaacttga 69 ||||||||||||||||||| Sbjct: 100342 ctgaaactcccaaacttga 100324
>dbj|AK149286.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930011E23 product:golgi phosphoprotein 4, full insert sequence Length = 5233 Score = 38.2 bits (19), Expect = 3.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 32 acagcaggtactatactgactga 54 ||||||| ||||||||||||||| Sbjct: 5070 acagcagatactatactgactga 5048
>gb|AC013361.6|AC013361 Homo sapiens chromosome 18, clone RP11-367D23, complete sequence Length = 154713 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 ctgaaactcccaaacttga 69 ||||||||||||||||||| Sbjct: 74907 ctgaaactcccaaacttga 74925
>gb|AC107307.3| Homo sapiens 3 BAC RP11-657G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158066 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctggtacaatgcaaaaggt 19 ||||||||||||||||||| Sbjct: 51001 ctggtacaatgcaaaaggt 51019
>gb|AC019041.8| Homo sapiens BAC clone RP11-4K20 from 2, complete sequence Length = 183358 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 ctcccaaacttgaacaggc 75 ||||||||||||||||||| Sbjct: 114698 ctcccaaacttgaacaggc 114716
>emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in linkage group 20, complete sequence Length = 212105 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 actgaaactcccaaacttg 68 ||||||||||||||||||| Sbjct: 75828 actgaaactcccaaacttg 75810
>gb|AY613856.1| Oikopleura dioica clone BACOIKO008 5xo15, complete sequence Length = 174913 Score = 38.2 bits (19), Expect = 3.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 ggaaagtagtacagcaggtacta 44 ||||||||| ||||||||||||| Sbjct: 151246 ggaaagtagcacagcaggtacta 151224
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ggcgacgctgccggcaggc 91 ||||||||||||||||||| Sbjct: 2595820 ggcgacgctgccggcaggc 2595838 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 606,246 Number of Sequences: 3902068 Number of extensions: 606246 Number of successful extensions: 40667 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40579 Number of HSP's gapped (non-prelim): 88 length of query: 91 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 70 effective length of database: 17,151,101,840 effective search space: 1200577128800 effective search space used: 1200577128800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)