Clone Name | rbart52a07 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7... | 30 | 2.4 | 2 | ARFF_ARATH (Q9ZTX8) Auxin response factor 6 | 28 | 5.3 |
---|
>PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7.11.1)| Length = 1142 Score = 29.6 bits (65), Expect = 2.4 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 55 QSKSKSSTSNLEDKLEFHGNTDDGK 129 Q K+ + TSNL D +EF+GN D K Sbjct: 1022 QKKATTETSNLTDIVEFNGNNDHRK 1046
>ARFF_ARATH (Q9ZTX8) Auxin response factor 6| Length = 933 Score = 28.5 bits (62), Expect = 5.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 40 GFRGIQSKSKSSTSNLEDKLEFHGNTDD-GKRGPP 141 G RG++ + + +SN DKL +GN DD G R P Sbjct: 883 GKRGLELLNSAPSSNNVDKLPSNGNCDDFGNRSDP 917 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,413,788 Number of Sequences: 219361 Number of extensions: 418442 Number of successful extensions: 1308 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1308 length of database: 80,573,946 effective HSP length: 26 effective length of database: 74,870,560 effective search space used: 1796893440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)