>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score =  236 bits (119), Expect = 2e-59
 Identities = 131/135 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aactgagcactgatgagattacataccagtcctctgtctgggttcaggggaatacagagc 60
            |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1154 aactgagcactgatgagattacatacaagtcctctgtctgggttcaggtgaatacagagc 1095

                                                                        
Query: 61   aagagcaagagtagcacatcaaacttggaagacaaattggaattccacggtaacacggac 120
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1094 aagagcaagagtagtacatcaaacttggaagacaaattggaattccacggtaacagggac 1035

                           
Query: 121  gatgggaagagaggg 135
            |||||||||||||||
Sbjct: 1034 gatgggaagagaggg 1020

>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 210101

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    acatcaaacttggaagacaaa 96
             |||||||||||||||||||||
Sbjct: 24157 acatcaaacttggaagacaaa 24177

>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 171960

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     acatcaaacttggaagacaaa 96
              |||||||||||||||||||||
Sbjct: 121183 acatcaaacttggaagacaaa 121203

>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     cagagcaagagcaagagtag 74
              ||||||||||||||||||||
Sbjct: 155822 cagagcaagagcaagagtag 155841

>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13
             Contains STSs, GSSs and a putative CpG island, complete
             sequence
          Length = 82183

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    cacatcaaacttggaagaca 94
             ||||||||||||||||||||
Sbjct: 72891 cacatcaaacttggaagaca 72872

>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ttggaagacaaattggaatt 104
              ||||||||||||||||||||
Sbjct: 159892 ttggaagacaaattggaatt 159873

>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttggaagacaaattggaatt 104
             ||||||||||||||||||||
Sbjct: 50150 ttggaagacaaattggaatt 50131

>gb|AC119279.8| Mus musculus chromosome 8, clone RP24-460J16, complete sequence
          Length = 139356

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    ggaagacaaattggaattc 105
             |||||||||||||||||||
Sbjct: 51083 ggaagacaaattggaattc 51101

>gb|AC169994.1| Rhesus Macaque  BAC CH250-169F18 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 169688

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 81     aaacttggaagacaaattggaat 103
              |||||||||||||||| ||||||
Sbjct: 136247 aaacttggaagacaaagtggaat 136269

>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 48      gggaatacagagcaagagc 66
               |||||||||||||||||||
Sbjct: 2365071 gggaatacagagcaagagc 2365089

>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence
          Length = 249301

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     gagcaagagcaagagtagc 75
              |||||||||||||||||||
Sbjct: 182282 gagcaagagcaagagtagc 182264

>gb|AC008277.4| Homo sapiens BAC clone RP11-311B14 from 2, complete sequence
          Length = 177089

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    atacagagcaagagcaaga 70
             |||||||||||||||||||
Sbjct: 93510 atacagagcaagagcaaga 93528

>gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 124071

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    gtcctctgtctgggttcag 47
             |||||||||||||||||||
Sbjct: 18915 gtcctctgtctgggttcag 18897

>gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, complete sequence
          Length = 209244

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    cataccagtcctctgtctg 40
             |||||||||||||||||||
Sbjct: 63126 cataccagtcctctgtctg 63108

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 80      caaacttggaagacaaattggaa 102
               ||||||||| |||||||||||||
Sbjct: 1169280 caaacttggcagacaaattggaa 1169258

>gb|AC010768.10| Homo sapiens chromosome 11, clone RP11-58K22, complete sequence
          Length = 192391

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    acagagcaagagcaagagt 72
             |||||||||||||||||||
Sbjct: 46704 acagagcaagagcaagagt 46686

>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence
          Length = 167400

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     cagagcaagagcaagagta 73
              |||||||||||||||||||
Sbjct: 100713 cagagcaagagcaagagta 100695

>emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 in linkage group 20,
             complete sequence
          Length = 200187

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aactgagcactgatgagat 19
             |||||||||||||||||||
Sbjct: 38327 aactgagcactgatgagat 38345

>gb|AF061779.1|AF061779 Homo sapiens cosmid 25, complete sequence
          Length = 47344

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 29   gtcctctgtctgggttcag 47
            |||||||||||||||||||
Sbjct: 8103 gtcctctgtctgggttcag 8121

>emb|BX323889.13| Zebrafish DNA sequence from clone CH211-14G4 in linkage group 20,
              complete sequence
          Length = 177017

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aactgagcactgatgagat 19
              |||||||||||||||||||
Sbjct: 165257 aactgagcactgatgagat 165239

>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185799

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    acagagcaagagcaagagt 72
             |||||||||||||||||||
Sbjct: 58357 acagagcaagagcaagagt 58375

>emb|AL133501.6|CNS01DV9 Human chromosome 14 DNA sequence BAC R-35B20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181838

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     acagagcaagagcaagagt 72
              |||||||||||||||||||
Sbjct: 155830 acagagcaagagcaagagt 155848

>dbj|AP000940.8| Homo sapiens genomic DNA, chromosome 18 clone:RP11-855E1, complete
             sequence
          Length = 159082

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    agcaagagcaagagtagca 76
             |||||||||||||||||||
Sbjct: 12846 agcaagagcaagagtagca 12864

>emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chromosome 12, complete
             sequence
          Length = 203805

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 44    tcaggggaatacagagcaagagcaaga 70
             |||| ||||||||||||||||| ||||
Sbjct: 51077 tcagtggaatacagagcaagagaaaga 51051

>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence
          Length = 236806

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    gagcaagagcaagagtagc 75
             |||||||||||||||||||
Sbjct: 71157 gagcaagagcaagagtagc 71139

>emb|AL627312.12| Mouse DNA sequence from clone RP23-276H1 on chromosome 11, complete
             sequence
          Length = 178178

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    tacagagcaagagcaagag 71
             |||||||||||||||||||
Sbjct: 23335 tacagagcaagagcaagag 23353

>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete
              sequence
          Length = 249534

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 33     tctgtctgggttcaggggaatacagag 59
              ||||||||||| |||| ||||||||||
Sbjct: 225070 tctgtctgggtacaggtgaatacagag 225044

>emb|AL163974.7|CNS05TBT Human chromosome 14 DNA sequence Partial sequence from BAC C-2644I21 of
             library CalTech-D from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 73471

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    acagagcaagagcaagagt 72
             |||||||||||||||||||
Sbjct: 10800 acagagcaagagcaagagt 10782

>dbj|AP000945.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-870F11, complete
              sequences
          Length = 216975

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     agcaagagcaagagtagca 76
              |||||||||||||||||||
Sbjct: 161531 agcaagagcaagagtagca 161549


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,546,963
Number of Sequences: 3902068
Number of extensions: 1546963
Number of successful extensions: 86219
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86151
Number of HSP's gapped (non-prelim): 68
length of query: 154
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 132
effective length of database: 17,147,199,772
effective search space: 2263430369904
effective search space used: 2263430369904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)