>gb|AC149316.2| Phakopsora pachyrhizi clone JGIAFNA-101K14, complete sequence
          Length = 39612

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 23    tttcccacttttatttttacccatgca 49
             |||||||||||| ||||||||||||||
Sbjct: 37077 tttcccacttttttttttacccatgca 37051

>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
             complete sequence
          Length = 178061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   cgtccaaagctccaaatccat 169
             |||||||||||||||||||||
Sbjct: 33586 cgtccaaagctccaaatccat 33606

>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE
          Length = 243542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     aatcactcaacaaagtttgct 100
              |||||||||||||||||||||
Sbjct: 152878 aatcactcaacaaagtttgct 152898

>emb|AL392003.11| Human DNA sequence from clone RP11-331H2 on chromosome 1 Containt the 3'
              end of the HSD17B7 gene for hydroxysteroid (17-beta)
              dehydrogenase 7, a novel protein (MGC48998) and a
              cytochrome c oxidase subunit VIIb (COX7B) pseudogene,
              complete sequence
          Length = 191872

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    ttcttctcagcaacatctttg 120
              |||||||||||||||||||||
Sbjct: 112038 ttcttctcagcaacatctttg 112058

>gb|AE005740.1| Caulobacter crescentus CB15 section 66 of 359 of the complete genome
          Length = 11134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 255  cagttcgccgagcgcctgcgc 275
            |||||||||||||||||||||
Sbjct: 9583 cagttcgccgagcgcctgcgc 9563

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 149      cgtccaaagctccaaatccat 169
                |||||||||||||||||||||
Sbjct: 19892422 cgtccaaagctccaaatccat 19892442

>gb|AF126027.1|AF126027 Oryza sativa photoperiod sensitive genic male sterility-like
           protein mRNA, complete cds
          Length = 744

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 149 cgtccaaagctccaaatccat 169
           |||||||||||||||||||||
Sbjct: 331 cgtccaaagctccaaatccat 311

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 259     tcgccgagcgcctgcgcaat 278
               ||||||||||||||||||||
Sbjct: 2909452 tcgccgagcgcctgcgcaat 2909433

>ref|XM_477035.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2514

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  tccaaatccatgaagaagca 178
            ||||||||||||||||||||
Sbjct: 1109 tccaaatccatgaagaagca 1128

>gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosome 16, complete sequence
          Length = 190523

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aaagctccaaatccatgaag 173
              ||||||||||||||||||||
Sbjct: 122188 aaagctccaaatccatgaag 122207

>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence
          Length = 195446

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aaagctccaaatccatgaag 173
             ||||||||||||||||||||
Sbjct: 19849 aaagctccaaatccatgaag 19868

>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ctccgccgccgtgacgctgc 313
              ||||||||||||||||||||
Sbjct: 680200 ctccgccgccgtgacgctgc 680181

>emb|AL121777.39|HSJ1057D4 Human DNA sequence from clone RP5-1057D4 on chromosome 20 Contains the
             SRMP1 gene for spermidine synthase pseudogene 1, the 5'
             end of the gene for a novel protein similar to
             glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2,
             KIAA1247) and a CpG island, complete sequence
          Length = 131888

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   ccaaagctccaaatccatga 171
             ||||||||||||||||||||
Sbjct: 70651 ccaaagctccaaatccatga 70670

>emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 on chromosome X Contains the 3'
             end of a novel gene (FLJ23018) and the 3' end of the TRPC5
             gene for transient receptor potential cation channel
             subfamily C member 5, complete sequence
          Length = 113028

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    ccacttttatttttacccatgcaa 50
             ||||||||||| ||||||||||||
Sbjct: 93121 ccacttttattgttacccatgcaa 93098

>gb|AC073856.17| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177363

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    caatttcccacttttatttt 39
             ||||||||||||||||||||
Sbjct: 86398 caatttcccacttttatttt 86379

>ref|NM_053506.1| Rattus norvegicus histamine receptor H3 (Hrh3), mRNA
          Length = 2761

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  ccatgctccgctccaaatgc 219
            ||||||||||||||||||||
Sbjct: 1753 ccatgctccgctccaaatgc 1772

>gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 169557

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   ttgcacgcacacaccatcac 200
             ||||||||||||||||||||
Sbjct: 51052 ttgcacgcacacaccatcac 51033

>gb|AE004760.1| Pseudomonas aeruginosa PAO1, section 321 of 529 of the complete
            genome
          Length = 11419

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  agttcgccgagcgcctgcgc 275
            ||||||||||||||||||||
Sbjct: 1398 agttcgccgagcgcctgcgc 1379

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     ccgccgccgtgacgctgcgg 315
               ||||||||||||||||||||
Sbjct: 2467174 ccgccgccgtgacgctgcgg 2467155

>dbj|AK173761.1| Ciona intestinalis cDNA, clone:citb002j03, full insert sequence
          Length = 2576

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  tcttctcagcaacatctttg 120
            ||||||||||||||||||||
Sbjct: 2013 tcttctcagcaacatctttg 1994

>dbj|AK101736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061I19, full
            insert sequence
          Length = 2514

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  tccaaatccatgaagaagca 178
            ||||||||||||||||||||
Sbjct: 1109 tccaaatccatgaagaagca 1128

>gb|AF148964.1|AF148964 Pseudomonas aeruginosa NADPH-dependent beta-ketoacyl reductase
           (rhlG) and RcsF (rcsF) genes, complete cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 agttcgccgagcgcctgcgc 275
           ||||||||||||||||||||
Sbjct: 495 agttcgccgagcgcctgcgc 476

>gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 of 74 of the complete
              sequence
          Length = 306598

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    ttgcacgcacacaccatcac 200
              ||||||||||||||||||||
Sbjct: 217054 ttgcacgcacacaccatcac 217073

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     gacaatcactcaacaaagtt 96
              ||||||||||||||||||||
Sbjct: 598644 gacaatcactcaacaaagtt 598625

>emb|AL132651.2|DMC103E12 Drosophila melanogaster cosmid clone 103E12
          Length = 42095

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   ttgcacgcacacaccatcac 200
             ||||||||||||||||||||
Sbjct: 20524 ttgcacgcacacaccatcac 20543

>dbj|AB015646.1| Rattus norvegicus mRNA for G protein-coupled receptor, complete cds
            and 3 splicing products
          Length = 2761

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  ccatgctccgctccaaatgc 219
            ||||||||||||||||||||
Sbjct: 1753 ccatgctccgctccaaatgc 1772

>dbj|AB042644.1| Oryza sativa mRNA for DEAD box RNA helicase OsPL10b, partial cds
          Length = 345

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tccaaatccatgaagaagca 178
           ||||||||||||||||||||
Sbjct: 136 tccaaatccatgaagaagca 155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,158,335
Number of Sequences: 3902068
Number of extensions: 4158335
Number of successful extensions: 75378
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75039
Number of HSP's gapped (non-prelim): 339
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)