ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HUTG_FUSNN (Q8RFN0) Formimidoylglutamase (EC 3.5.3.8) (Formimino... 29 3.1
2HIS8_SHIBS (Q323J1) Histidinol-phosphate aminotransferase (EC 2.... 28 7.0

>HUTG_FUSNN (Q8RFN0) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)|
           (Formiminoglutamate hydrolase)
          Length = 318

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 27  IEQNLLLQFTICGTTWHSTPKTGYSTPKTNYLWYFESTG 143
           +E+N  +  TIC   +H T   G S P+T  +W  ++ G
Sbjct: 230 LERNDYIHLTICTDVFHITCAPGVSAPQTFGIWPNQAIG 268



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>HIS8_SHIBS (Q323J1) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 356

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 112 VFGVEYPVFGVECQVVPHIVNW 47
           ++GV     GVEC+ VP + NW
Sbjct: 112 MYGVSAETIGVECRTVPTLDNW 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,266,049
Number of Sequences: 219361
Number of extensions: 352802
Number of successful extensions: 912
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 80,573,946
effective HSP length: 23
effective length of database: 75,528,643
effective search space used: 1812687432
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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