ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NUMB_HUMAN (P49757) Protein numb homolog (h-Numb) (Protein S171) 30 2.4
2G6PD_MYCTU (P0A584) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.... 28 6.9
3G6PD_MYCBO (P0A585) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.... 28 6.9
4EPLIN_HUMAN (Q9UHB6) Epithelial protein lost in neoplasm 28 6.9

>NUMB_HUMAN (P49757) Protein numb homolog (h-Numb) (Protein S171)|
          Length = 651

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 37  PIMGINVSQELAGQIVTPLQSQHIHTHGSPSFIRE 141
           P++GI  SQ +A    T    Q  H H SPS +R+
Sbjct: 525 PVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQ 559



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>G6PD_MYCTU (P0A584) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 514

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 19  IFMGKPPIMGINVSQELAGQIVTPLQSQHIHTHGSP 126
           + +G+P +  +N   ELA +I+ P   +H   HG+P
Sbjct: 453 VLLGEPSLFPVNAEVELAWEILDP-ALEHWAAHGTP 487



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>G6PD_MYCBO (P0A585) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 514

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 19  IFMGKPPIMGINVSQELAGQIVTPLQSQHIHTHGSP 126
           + +G+P +  +N   ELA +I+ P   +H   HG+P
Sbjct: 453 VLLGEPSLFPVNAEVELAWEILDP-ALEHWAAHGTP 487



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>EPLIN_HUMAN (Q9UHB6) Epithelial protein lost in neoplasm|
          Length = 759

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 8   NLGKYSWENHQSWESTSVRS*QGKSLHL 91
           N+GK +W+N +S   T  RS +G SL +
Sbjct: 647 NVGKTTWQNKESKGETGKRSKEGHSLEM 674


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,939,136
Number of Sequences: 219361
Number of extensions: 342112
Number of successful extensions: 937
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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