>PSA5_ORYSA (Q9LSU1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S|
           proteasome alpha subunit E) (20S proteasome subunit
           alpha-5)
          Length = 237

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 33/35 (94%), Positives = 34/35 (97%)
 Frame = -2

Query: 372 VMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 268
           VMEEKVTPNNVDIA VSP+YHLYTPAEVEAVIARL
Sbjct: 203 VMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237

>PSA5A_ARATH (O81149) Proteasome subunit alpha type 5-A (EC 3.4.25.1) (20S|
           proteasome alpha subunit E-1)
          Length = 237

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -2

Query: 372 VMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 268
           VMEEKVTPNNVDIA V+P+YHLYTP EVEAVIARL
Sbjct: 203 VMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237

>PSA5_SOYBN (Q9M4T8) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S|
           proteasome alpha subunit E) (20S proteasome subunit
           alpha-5)
          Length = 237

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = -2

Query: 372 VMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 268
           VMEEKVTPNNVDIA V+P+YHLYTP+EVEAVI+RL
Sbjct: 203 VMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237

>PSA5B_ARATH (Q42134) Proteasome subunit alpha type 5-B (EC 3.4.25.1) (20S|
           proteasome alpha subunit E-2) (Proteasome component Z)
          Length = 237

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = -2

Query: 372 VMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 268
           VMEEKVTPNNVDIA V+P+YHLYTP EVEAVI+RL
Sbjct: 203 VMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237

>SERA_BOVIN (Q5EAD2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)|
          Length = 532

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 187 AYENSDATTWQALLSLQEA---VSQSGNPSQPRDDRFNLCRSVEVVAGGDIRNVNIVWG 354
           A + S+     A+L ++EA   V+ S NP+ PR+  F  C     +AG   + V +V G
Sbjct: 381 ASQQSNVNLVNAMLLVKEAGLDVTTSHNPATPREQDFGECLLTVALAGAPYQAVGLVQG 439

>FUMC_BACHD (Q9KCX4) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)|
          Length = 462

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 133 FLVVQRLSATVNKRMTGLAYENSDATTWQA 222
           F ++++ +A VNK++  L+ E +DA TW A
Sbjct: 47  FALLKKAAANVNKKLGQLSAEKADAITWAA 76

>AMPM_MANSE (Q11001) Membrane alanyl aminopeptidase precursor (EC 3.4.11.-)|
           (Aminopeptidase N-like protein) (CryIA(C) receptor)
           (Fragment)
          Length = 990

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +1

Query: 166 NKRMTGLAYENSDATTW----QALLSLQEAVSQSGNPSQPRDDRFNLCRS 303
           NK+++G    N D TTW    +AL S    V    + SQ  DD F L RS
Sbjct: 596 NKQVSGFYRVNYDNTTWGLITRALRSANRTVIHELSRSQIVDDVFQLARS 645

>HISX1_RHILO (Q989E7) Histidinol dehydrogenase 1 (EC 1.1.1.23) (HDH 1)|
          Length = 430

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +1

Query: 142 VQRLSATVNKRMTGLAYENSDATTWQALLSLQEAVSQSGNPSQPRDDRFNLCRSVEV 312
           ++ L   V+K+    AYE +D    +AL   ++ +       +P+DDR+     VE+
Sbjct: 61  LKSLGIAVSKQDIAAAYETADPKAIEALEFARDRIRSHHERQRPKDDRYTDATGVEL 117

>AMPN_PLUXY (P91887) Aminopeptidase N precursor (EC 3.4.11.2) (Microsomal|
           aminopeptidase) (APN1)
          Length = 946

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 163 VNKRMTGLAYENSDATTWQAL---LSLQEAVSQSGNPSQPRDDRFNLCRS 303
           VNK+ TG    N D   W+AL   L+    +    N +Q  DD FNL R+
Sbjct: 580 VNKQQTGYYRVNYDPENWRALAKVLNDTHEIIHLLNRAQLIDDSFNLARN 629

>ATG2_MAGGR (Q51ZN8) Autophagy-related protein 2|
          Length = 2077

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +1

Query: 145  QRLSATVNKRMTGLAYENSDATTWQALLSLQEAVSQSGNPSQPRDDRFNLCRSVEVVAGG 324
            + LS  +N+ + G+   N   T   A  +     S+ G PS+P+  R  L RS       
Sbjct: 1607 RELSQNINQELYGI---NPSDTESVATTAFTTTTSRMGGPSRPKGKRLKLTRSKHHKITF 1663

Query: 325  DIRNVNIV 348
            ++  VN V
Sbjct: 1664 ELSGVNAV 1671

>SYY_SYNAS (Q2LR98) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 428

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
 Frame = -1

Query: 283 GHREVVKDCHFVRQPLE-------GIVVPARSLHLNSHMPVQSFVCLQ*H 155
           G  E V D + VR+ LE       G    ARSLH+ S +P+ + + LQ H
Sbjct: 14  GFIEQVTDENAVRKALEAPLACYIGFDPTARSLHIGSLVPIMALIHLQRH 63

>EX5B_CHLPN (Q9Z7G7) Exodeoxyribonuclease V beta chain (EC 3.1.11.5)|
          Length = 1050

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 170 LFTVALRRCTTKKNYFSA-FQPARRYHRLHLCVFGS*NISTTKGDLVMV*KKGELVF 3
           LF ++L   TTKK  F+  FQ    Y   H  +     + TT+G+++    +G+L+F
Sbjct: 586 LFGLSLDEVTTKKEDFTIYFQSLHSYISHHGLLATFYRVMTTQGNVLFSSPRGDLIF 642

>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein|
           Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2;
           Selenoprotein Se-P1]
          Length = 385

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 334 CECLPQLPPLHSCRG*SGHREVVKDC 257
           C+C   LP L SC+G     +V++ C
Sbjct: 323 CQCAENLPSLCSCQGLFAEEKVIESC 348

>RIM13_YEAST (Q03792) Calpain-like protease 1 (EC 3.4.22.-) (Cysteine protease|
           RIM13) (Calpain-7) (Regulator of IME2 protein 13)
          Length = 727

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +1

Query: 154 SATVNKRMTGLAYENSDATTWQALLSLQEAVSQ 252
           S+++  R+ GLA ++ D+T  +A+L L+E VS+
Sbjct: 22  SSSIINRLVGLAMKSEDSTFIEAVLVLKENVSK 54

>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor|
          Length = 402

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 334 CECLPQLPPLHSCRG*SGHREVVKDC 257
           C+C  +LP L SC+G      V++ C
Sbjct: 338 CQCTEKLPSLCSCQGLLAEENVIESC 363

>TASM_POVHA (P03080) Small T antigen|
          Length = 194

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 100 GITGCICV-CLVRKTSLLLKATW 35
           GI+ C C+ CL+RK   LLK +W
Sbjct: 114 GISTCNCILCLLRKQHFLLKKSW 136

>TAMI_POVHA (P03079) Middle T antigen|
          Length = 401

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 100 GITGCICV-CLVRKTSLLLKATW 35
           GI+ C C+ CL+RK   LLK +W
Sbjct: 114 GISTCNCILCLLRKQHFLLKKSW 136

>AMPN_MANSE (P91885) Aminopeptidase N precursor (EC 3.4.11.2) (Microsomal|
           aminopeptidase) (APN2)
          Length = 942

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +1

Query: 166 NKRMTGLAYENSDATTWQAL---LSLQEAVSQSGNPSQPRDDRFNLCRS 303
           NK+ TG    N D   W AL   L+    +    N +Q  DD FNL R+
Sbjct: 577 NKQQTGYYRVNYDVENWVALARVLNNSHEIIHVLNRAQIVDDAFNLARN 625

>CO9_RABIT (P48747) Complement component C9 precursor|
          Length = 557

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 282 PLQPLQECRGGSWGRHSQCQHCLGSPF 362
           PLQP+ +CR   W   S C  CL   F
Sbjct: 37  PLQPI-DCRMSPWSEWSHCDPCLRQMF 62

>FTHS_BIFLO (Q8G700) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 505

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
 Frame = +1

Query: 67  EPNTHKCSR*YLRAGWNAEK*FFLVVQRL------SATVNKRMTGLAYENSDATTWQALL 228
           EP++HK       A W AE  + +  +R+      + +V++ M  L      +    A +
Sbjct: 396 EPHSHKGMALTENAKWVAENAYGVPAERVIYKPGFTESVSEAME-LCQSAGISLDDLAFV 454

Query: 229 SLQEAVSQSGNPSQPRDDRFNLCRSVEVVAGGDIRNVNI 345
           +++   + + N   P ++R    + VEV AG  + +VN+
Sbjct: 455 AVKSPATMTDNDRAPEEERTVALKKVEVHAGAGLVHVNL 493

>YEAB_ECOLI (P43337) Hypothetical nudix hydrolase yeaB|
          Length = 192

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 280 HREVVKDCHFVRQPLEGIVVPARSLHLNSH 191
           HR+       VR+P  G+++  RS+HL  H
Sbjct: 29  HRQAAVLIPIVRRPQPGLLLTQRSIHLRKH 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,688,526
Number of Sequences: 219361
Number of extensions: 1090162
Number of successful extensions: 2623
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2623
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)