ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence 100 6e-18
2gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence 100 6e-18
3gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 92 2e-15
4dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
5dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
6dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mR... 90 6e-15
7gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence 76 9e-11
8ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ pepti... 68 2e-08
9gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subu... 68 2e-08
10gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subu... 68 2e-08
11emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
12emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
13emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
14gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subun... 68 2e-08
15gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome... 66 9e-08
16dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 66 9e-08
18emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Co... 60 5e-06
19emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
20gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, ... 50 0.005
21dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 48 0.020
22gb|L23648.1| Caenorhabditis elegans cosmid F44B9, complete sequence 46 0.081
23ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ pepti... 44 0.32
24gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete s... 44 0.32
25gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 ... 44 0.32
26gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 ... 44 0.32
27dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical prote... 44 0.32
28gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete s... 44 0.32
29gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subun... 44 0.32
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
31gb|BC090701.1| Danio rerio cDNA clone IMAGE:7140566 42 1.3
32emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in ... 42 1.3
33gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
34emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.3
35emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.3
36emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chr... 40 5.0
37emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chr... 40 5.0
38gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell ... 40 5.0
39gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell... 40 5.0
40dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 5.0
41ref|NM_079730.2| Drosophila melanogaster klingon CG6669-RA (klg)... 40 5.0
42gb|AY060363.1| Drosophila melanogaster LD10776 full length cDNA 40 5.0
43gb|U78177.1|DMU78177 Drosophila melanogaster Klingon (klingon) m... 40 5.0
44gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, r... 40 5.0
45gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79... 40 5.0
46gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 ... 40 5.0
47gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 5.0
48emb|AL513347.11| Mouse DNA sequence from clone RP23-476D16 on ch... 40 5.0 
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence
          Length = 1161

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                       
Query: 264 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 323
           |||||| |||||||||||| ||||| ||||| ||||| ||||||||||||||  ||||||
Sbjct: 341 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 400

                                                             
Query: 324 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
             || || ||||| || || ||||||||||||||||| ||||||||||||
Sbjct: 401 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacc 450
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>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence
          Length = 1354

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                        
Query: 264  ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 323
            |||||| |||||||||||| ||||| ||||| ||||| ||||||||||||||  ||||||
Sbjct: 1121 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 1062

                                                              
Query: 324  agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
              || || ||||| || || ||||||||||||||||| ||||||||||||
Sbjct: 1061 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacc 1012
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 264  ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 323
            |||||| |||||||||||| ||||| ||||| ||||| ||||||||||||||  |||| |
Sbjct: 1014 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttgggag 955

                                                              
Query: 324  agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
              || || ||||| || || ||||||||||||||||| ||||||||||||
Sbjct: 954  caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacc 905
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>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full
           insert sequence
          Length = 1188

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 324
           ||||||||  || ||||| ||||||||||||||||| ||||||||||||||| |||| ||
Sbjct: 907 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 848

                                                            
Query: 325 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
            || || || || || || |||||||| || ||||||||||||||||||
Sbjct: 847 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacc 799
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>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full
           insert sequence
          Length = 1056

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 324
           ||||||||  || ||||| ||||||||||||||||| ||||||||||||||| |||| ||
Sbjct: 802 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 743

                                                            
Query: 325 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
            || || || || || || |||||||| || ||||||||||||||||||
Sbjct: 742 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacc 694
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>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5
           subunit of 20S proteasome, complete cds
          Length = 1056

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 324
           ||||||||  || ||||| ||||||||||||||||| ||||||||||||||| |||| ||
Sbjct: 807 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 748

                                                            
Query: 325 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
            || || || || || || |||||||| || ||||||||||||||||||
Sbjct: 747 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacc 699
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>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence
          Length = 1104

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                       
Query: 264 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 323
           |||||| ||||||||| || ||||| ||||| ||||| ||||||||||||||  |||| |
Sbjct: 911 ttcacagcctcgcgatcacggcttcgacctcggcaggggtgtagaggtggtacttgggag 852

                                                             
Query: 324 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacc 373
             || || ||||| || || ||||||||||||||||| || |||||||||
Sbjct: 851 caaccttggcaatatcgacgttgtttggggtcaccttctcctccataacc 802
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>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G14290 (PAE2) mRNA, complete cds
          Length = 1023

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 806 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 748

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 747 tgtcgacattgtttggagtcaccttttcttccat 714
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>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2
           (At3g14290) mRNA, complete cds
          Length = 745

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 702 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 644

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 643 tgtcgacattgtttggagtcaccttttcttccat 610
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>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2
           (At3g14290) mRNA, complete cds
          Length = 987

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 805 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 747

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 746 tgtcgacattgtttggagtcaccttttcttccat 713
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>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB94ZC05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 933

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 780 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 722

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 721 tgtcgacattgtttggagtcaccttttcttccat 688
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>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB79ZG11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 948

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 740 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 682

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 681 tgtcgacattgtttggagtcaccttttcttccat 648
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>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1499

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                        
Query: 277  gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
            |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 1329 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 1271

                                              
Query: 336  tgtcaacattgtttggggtcaccttttcttccat 369
            |||| ||||||||||| |||||||||||||||||
Sbjct: 1270 tgtcgacattgtttggagtcaccttttcttccat 1237
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>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA,
           complete cds
          Length = 983

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| || ||||| |  ||| || ||||
Sbjct: 744 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 686

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 685 tgtcgacattgtttggagtcaccttttcttccat 652
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>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0042J05, complete sequence
          Length = 150295

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                       
Query: 265    tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 321
              ||||||||  || ||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 100488 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 100544
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                         
Query: 265      tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 321
                ||||||||  || ||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 23084485 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23084541
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                         
Query: 265      tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 321
                ||||||||  || ||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 23394395 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23394451
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>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB11ZE03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 844

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 80/94 (85%), Gaps = 2/94 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 335
           |||||| |||||||||||   ||||||||||||||| | |||| || | |||  | ||||
Sbjct: 726 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactctggcaa 668

                                             
Query: 336 tgtcaacattgtttggggtcaccttttcttccat 369
           |||| ||||||||||| |||||||||||||||||
Sbjct: 667 tgtcgacattgtttggagtcaccttttcttccat 634
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>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 868

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/87 (85%), Gaps = 2/87 (2%)
 Strand = Plus / Minus

                                                                       
Query: 284 gcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaatgtcaac 342
           |||||||||||   ||||||||||||||| || ||||| |  ||| || |||||||| ||
Sbjct: 733 gcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaatgtcgac 675

                                      
Query: 343 attgtttggggtcaccttttcttccat 369
           ||||||||| || ||||||||||||||
Sbjct: 674 attgtttggagtaaccttttcttccat 648
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>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds
          Length = 966

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 332 gcaatgtcaacattgtttggggtcaccttttcttccataac 372
           ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 660 gcaatgtcaacgttgttgggagtgaccttttcttccataac 620
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>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21
          Length = 83906

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 71/84 (84%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                         
Query: 277   gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 335
             |||||| |||||||||||   ||||||||||||||| | |||| || | ||| || ||||
Sbjct: 30467 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactttggcaa 30409

                                     
Query: 336   tgtcaacattgtttggggtcacct 359
             |||| ||||||||||| |||||||
Sbjct: 30408 tgtcgacattgtttggagtcacct 30385
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>gb|L23648.1| Caenorhabditis elegans cosmid F44B9, complete sequence
          Length = 36327

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 107   ctggctggaatgctgaaaaataattct 133
             |||| ||||||||||||||||||||||
Sbjct: 15724 ctgggtggaatgctgaaaaataattct 15750
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>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine
           endopeptidase AT1G53850 (PAE1) mRNA, complete cds
          Length = 1006

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 347 tttggggtcaccttttcttccataac 372
           ||||| ||||||||||||||||||||
Sbjct: 747 tttggagtcaccttttcttccataac 722
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>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence
          Length = 113373

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 64    tacgaaccaaacacacacaaat 85
             ||||||||||||||||||||||
Sbjct: 56652 tacgaaccaaacacacacaaat 56673
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>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA,
           complete cds
          Length = 869

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 347 tttggggtcaccttttcttccataac 372
           ||||| ||||||||||||||||||||
Sbjct: 632 tttggagtcaccttttcttccataac 607
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>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA,
           complete cds
          Length = 1003

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 347 tttggggtcaccttttcttccataac 372
           ||||| ||||||||||||||||||||
Sbjct: 745 tttggagtcaccttttcttccataac 720
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>dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL22-54-C04
          Length = 543

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 347 tttggggtcaccttttcttccataac 372
           ||||| ||||||||||||||||||||
Sbjct: 274 tttggagtcaccttttcttccataac 249
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>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence
          Length = 1006

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 347 tttggggtcaccttttcttccataac 372
           ||||| ||||||||||||||||||||
Sbjct: 747 tttggagtcaccttttcttccataac 722
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>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA,
           complete cds
          Length = 1005

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 347 tttggggtcaccttttcttccataac 372
           ||||| ||||||||||||||||||||
Sbjct: 725 tttggagtcaccttttcttccataac 700
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 275      gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 315
                |||||||| || || ||||||| ||| ||||||||||||||
Sbjct: 18912624 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18912664
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>gb|BC090701.1| Danio rerio cDNA clone IMAGE:7140566
          Length = 2815

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 45   tttagtagtagagatgtttta 65
            |||||||||||||||||||||
Sbjct: 2532 tttagtagtagagatgtttta 2512
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>emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in linkage group 11,
             complete sequence
          Length = 48855

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    tttagtagtagagatgtttta 65
             |||||||||||||||||||||
Sbjct: 33052 tttagtagtagagatgtttta 33072
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 275      gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 315
                |||||||| || || ||||||| ||| ||||||||||||||
Sbjct: 18838851 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18838891
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>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 275   gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 315
             |||||||| || || ||||||| ||| ||||||||||||||
Sbjct: 57755 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 57715
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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 275  gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 315
            |||||||| || || ||||||| ||| ||||||||||||||
Sbjct: 8741 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 8781
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>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a
             novel gene, the LHX9 gene for LIM homeobox 9 and a CpG
             island, complete sequence
          Length = 182527

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   tgaaaaataattctttttgg 139
             ||||||||||||||||||||
Sbjct: 37692 tgaaaaataattctttttgg 37711
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>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the
              gene for a novel protein (3732413I11Rik), a novel gene
              (4930597A21Rik), the 5' end of the Ebf1 gene for early
              B-cell factor 1, a novel gene and a CpG island, complete
              sequence
          Length = 215524

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    taaacaaacgaatgactgga 183
              ||||||||||||||||||||
Sbjct: 158298 taaacaaacgaatgactgga 158279
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>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179363

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   gtttggggtcaccttttctt 365
             ||||||||||||||||||||
Sbjct: 59604 gtttggggtcaccttttctt 59585
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>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163710

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    gtttggggtcaccttttctt 365
              ||||||||||||||||||||
Sbjct: 157651 gtttggggtcaccttttctt 157632
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    tggtggtacaacgtcttagtgcta 160
              ||||||||| ||||||||||||||
Sbjct: 535253 tggtggtaccacgtcttagtgcta 535276
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>ref|NM_079730.2| Drosophila melanogaster klingon CG6669-RA (klg), mRNA
          Length = 4037

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  attctttttggtggtacaac 148
            ||||||||||||||||||||
Sbjct: 3269 attctttttggtggtacaac 3250
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>gb|AY060363.1| Drosophila melanogaster LD10776 full length cDNA
          Length = 4052

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  attctttttggtggtacaac 148
            ||||||||||||||||||||
Sbjct: 3269 attctttttggtggtacaac 3250
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>gb|U78177.1|DMU78177 Drosophila melanogaster Klingon (klingon) mRNA, complete cds
          Length = 3927

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  attctttttggtggtacaac 148
            ||||||||||||||||||||
Sbjct: 3159 attctttttggtggtacaac 3178
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>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone
             BACR01K08, complete sequence
          Length = 177127

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   attctttttggtggtacaac 148
             ||||||||||||||||||||
Sbjct: 52886 attctttttggtggtacaac 52867
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>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the
             complete sequence
          Length = 233356

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   attctttttggtggtacaac 148
             ||||||||||||||||||||
Sbjct: 80784 attctttttggtggtacaac 80765
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>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete
             sequence
          Length = 285729

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   gtttggggtcaccttttctt 365
             ||||||||||||||||||||
Sbjct: 85095 gtttggggtcaccttttctt 85114
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     accgcttcaacctctgcagg 300
               ||||||||||||||||||||
Sbjct: 1363782 accgcttcaacctctgcagg 1363801
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>emb|AL513347.11| Mouse DNA sequence from clone RP23-476D16 on chromosome X, complete
             sequence
          Length = 176287

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    accaaacacacacaaatgca 88
             ||||||||||||||||||||
Sbjct: 99791 accaaacacacacaaatgca 99810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,016,165
Number of Sequences: 3902068
Number of extensions: 4016165
Number of successful extensions: 76049
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75868
Number of HSP's gapped (non-prelim): 179
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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