ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart51h01 |
|---|---|
| Clone Library Name | barley_pub |
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 119 bits (299), Expect = 1e-27 Identities = 55/74 (74%), Positives = 64/74 (86%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 R+AFKGTFI+ GG+ RE+G + V++G TDLVA+GR FLANPDLPKRF+V A LNKYDR T Sbjct: 293 RKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPT 352 Query: 172 FYTPDPVVGYTDYP 131 FYT DPVVGYTDYP Sbjct: 353 FYTSDPVVGYTDYP 366
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 118 bits (296), Expect = 3e-27 Identities = 51/74 (68%), Positives = 62/74 (83%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 R+AFKGT IA+GGY + +G K + E Y DL++FGR+FLANPDLPKRFEV A LNKY+R T Sbjct: 276 RKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPKRFEVNAPLNKYNRST 335 Query: 172 FYTPDPVVGYTDYP 131 FYT DP++GYTDYP Sbjct: 336 FYTNDPIIGYTDYP 349
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 118 bits (295), Expect = 4e-27 Identities = 54/74 (72%), Positives = 63/74 (85%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 REAFKGTFI+ GG+ RE+G + V +G TDLVA+GR FLANPDLPKRF++ A LNKY+R T Sbjct: 295 REAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRST 354 Query: 172 FYTPDPVVGYTDYP 131 FYT DPVVGYTDYP Sbjct: 355 FYTSDPVVGYTDYP 368
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 115 bits (289), Expect = 2e-26 Identities = 51/74 (68%), Positives = 62/74 (83%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 R+A+KGTFI GGYDRE+G + + E DLVA+GRLF++NPDLPKRFE+ A LNKY+R T Sbjct: 297 RKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDT 356 Query: 172 FYTPDPVVGYTDYP 131 FYT DP+VGYTDYP Sbjct: 357 FYTSDPIVGYTDYP 370
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 102 bits (255), Expect = 2e-22 Identities = 45/74 (60%), Positives = 60/74 (81%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 R A+ GTF+++GG+++E G + V +G DLV++GRLF+ANPDL RF++ ELNKY+R T Sbjct: 310 RMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKT 369 Query: 172 FYTPDPVVGYTDYP 131 FYT DPVVGYTDYP Sbjct: 370 FYTQDPVVGYTDYP 383
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 101 bits (252), Expect = 4e-22 Identities = 46/74 (62%), Positives = 58/74 (78%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 R A++GTFI +GGY RE G + V +G DLV++GRLF++NPDL R ++ A LNKY+R T Sbjct: 309 RNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKT 368 Query: 172 FYTPDPVVGYTDYP 131 FYT DPVVGYTDYP Sbjct: 369 FYTQDPVVGYTDYP 382
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 86.7 bits (213), Expect = 1e-17 Identities = 41/55 (74%), Positives = 44/55 (80%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNK 188 R AF GTFI GGY RE+G K V EG TDLVA+GRLFLANPDLPKRFE+ A LNK Sbjct: 270 RNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLANPDLPKRFELNAPLNK 324
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 70.1 bits (170), Expect = 1e-12 Identities = 36/75 (48%), Positives = 46/75 (61%) Frame = -1 Query: 355 YREAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRM 176 Y+ + FI GG+DR+ ++ + T LVAFGR FL+NPDLP R + LNK+DR Sbjct: 307 YKNLWGDPFITAGGHDRDSAIQMAEQENT-LVAFGRYFLSNPDLPFRLKYNLPLNKWDRA 365 Query: 175 TFYTPDPVVGYTDYP 131 TFYT GY DYP Sbjct: 366 TFYTKMSPKGYIDYP 380
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 68.6 bits (166), Expect = 4e-12 Identities = 37/71 (52%), Positives = 43/71 (60%) Frame = -1 Query: 343 FKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMTFYT 164 +KG FI GGYD E + E LVAFGR F+ANPDL R + LNK+DR +FY Sbjct: 304 WKGPFITAGGYDPETAVQAANERGV-LVAFGRNFIANPDLVFRIKHHIPLNKWDRSSFYL 362 Query: 163 PDPVVGYTDYP 131 P GYTDYP Sbjct: 363 PKTEKGYTDYP 373
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 60.8 bits (146), Expect = 8e-10 Identities = 36/74 (48%), Positives = 42/74 (56%), Gaps = 3/74 (4%) Frame = -1 Query: 343 FKGTFIANGGYDREEGGKVVTEGYTD---LVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 +KG I G Y +VV E D L+ +GR F++NPDL R E G LNKYDR T Sbjct: 316 WKGPIIRAGNYALHP--EVVREQVKDPRTLIGYGRFFISNPDLVYRLEEGLPLNKYDRST 373 Query: 172 FYTPDPVVGYTDYP 131 FYT GYTDYP Sbjct: 374 FYTMS-AEGYTDYP 386
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 56.2 bits (134), Expect = 2e-08 Identities = 32/74 (43%), Positives = 40/74 (54%) Frame = -1 Query: 352 REAFKGTFIANGGYDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 R F G I G Y E+ ++ +G D VAFGR ++ANPDL R + AELN + Sbjct: 291 RARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAES 350 Query: 172 FYTPDPVVGYTDYP 131 FY GYTDYP Sbjct: 351 FY-GGGAEGYTDYP 363
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 54.3 bits (129), Expect = 7e-08 Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Frame = -1 Query: 343 FKGTFIANGGYDREEGGKVVTEGYTD---LVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 +KG I G + +VV E D L+ +GR F++NPDL R E G LNKYDR T Sbjct: 316 WKGPIIRAGNFALHP--EVVREEVKDPRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDT 373 Query: 172 FYTPDPVVGYTDYP 131 FY GY DYP Sbjct: 374 FYKMS-AEGYIDYP 386
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 53.9 bits (128), Expect = 9e-08 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -1 Query: 343 FKGTFIANGGYDREEGGKVV-TEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDRMTFY 167 +KG + G Y + + ++ L+ +GR F+ANPDL +R E G LN+YDR +FY Sbjct: 316 WKGNVLRVGNYALDPDAAITDSKNPNTLIGYGRAFIANPDLVERLEKGLPLNQYDRPSFY 375 Query: 166 TPDPVVGYTDYP 131 GY DYP Sbjct: 376 KMS-AEGYIDYP 386
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 53.5 bits (127), Expect = 1e-07 Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Frame = -1 Query: 343 FKGTFIANGGYDREEGGKVVTEGYTD---LVAFGRLFLANPDLPKRFEVGAELNKYDRMT 173 +KG I G + +VV E D L+ +GR F++NPDL R E G LNKYDR T Sbjct: 316 WKGPVIRAGNFALHP--EVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDT 373 Query: 172 FYTPDPVVGYTDYP 131 FY GY DYP Sbjct: 374 FYQMS-AHGYIDYP 386
>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)| (Estrogen-binding protein) (EBP) Length = 406 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = -1 Query: 343 FKGTFIANGGY--DREEGGKVVTEGYTD--LVAFGRLFLANPDLPKRFEVGAELNKYDRM 176 +KG FI G Y D E ++ + D ++ F R F +NPDL ++ ++G LN Y+R Sbjct: 321 WKGNFIRAGNYTYDAPEFKTLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNRE 380 Query: 175 TFY 167 FY Sbjct: 381 EFY 383
>DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (TMADh)| Length = 729 Score = 32.7 bits (73), Expect = 0.23 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -1 Query: 352 REAFKGTFIANGGY-DREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVG 203 ++ K + G Y D E+ ++VT+GY D++ R +A+P LP++ E G Sbjct: 287 KQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQG 337
>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)| Length = 651 Score = 32.3 bits (72), Expect = 0.29 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -1 Query: 292 KVVTEGYTDLVAFGRLFLANPDLPKRFEVGAE 197 K++ EG D VA GR +A+P+ PK+ + G + Sbjct: 307 KIIAEGRADFVAVGRGLIADPEWPKKAKEGRQ 338
>HYUA_PSESN (Q01262) Hydantoin utilization protein A (ORF2)| Length = 690 Score = 31.2 bits (69), Expect = 0.66 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = -1 Query: 343 FKGTFIANGG---YDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNKYDR 179 F GT IA YD + G + TEGY D++ GR P+ + + E+ DR Sbjct: 63 FHGTTIATNAILEYDGAKTGMITTEGYRDIIHIGR-----HQRPQNYSIMQEIPWQDR 115
>BRO1_CANGA (Q6FJG8) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 888 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/62 (33%), Positives = 28/62 (45%) Frame = +3 Query: 156 GSGV*KVILSYLFSSAPTSNRFGRSGFARNSRPKATRSV*PSVTTLPPSSRSYPPLAMKV 335 GS + S S PT RF + A NSRP + S ++PP+ PP +V Sbjct: 737 GSSIDSQFQSMNLGSVPTPQRFPQPP-APNSRPIVSMENYTSQFSVPPAHGDLPPAYNQV 795 Query: 336 PL 341 PL Sbjct: 796 PL 797
>BAIC_EUBSP (P19410) Bile acid-inducible operon protein C| Length = 540 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 304 EEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAE 197 E KV+ EG DLV GR LA+P+ + G E Sbjct: 291 EMANKVIEEGKFDLVGIGRAQLADPNWITKVREGKE 326
>DHDM_HYPSX (Q48303) Dimethylamine dehydrogenase (EC 1.5.8.1) (DMADh)| Length = 735 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -1 Query: 313 YDREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVG 203 YD E+ +V+ G D++ R +A+P LP++ + G Sbjct: 307 YDPEKMLQVIKAGIIDIIGAARPSIADPWLPRKIDEG 343
>YFI6_YEAST (P43597) Hypothetical 137.7 kDa protein in UGS1-FAB1 intergenic| region Length = 1233 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 310 DREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNK 188 D EE +V T+ + + L N D PK EV AELNK Sbjct: 860 DTEEDAEVENSEKTEFIKV-KAELGNLDAPKEAEVTAELNK 899 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 310 DREEGGKVVTEGYTDLVAFGRLFLANPDLPKRFEVGAELNK 188 D EE +V T+ + + L N D PK EV AELNK Sbjct: 813 DTEEDAEVENSEKTEFIKV-KAELENLDAPKEAEVTAELNK 852
>SYFB_ERWCT (Q6D4H3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 795 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -2 Query: 333 PSSPMVDMTARKGARWSQRVTLT*WPSGGYSSRIRTFQSGSRLV 202 PS V+M+ + + WS ++ + SR+R F+SG R V Sbjct: 534 PSPISVEMSVMRLSLWSGLLSAAVYNQNRQQSRLRLFESGLRFV 577
>AFF3_HUMAN (P51826) AF4/FMR2 family member 3 (LAF-4 protein) (Lymphoid nuclear| protein related to AF4) Length = 1227 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 Query: 187 TCSAPHQPRTALEGPDSRGIAARRP 261 TC +PRTA + P S+G+ + P Sbjct: 526 TCKEEQRPRTANKAPGSKGVKQKSP 550 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,686,623 Number of Sequences: 219361 Number of extensions: 764749 Number of successful extensions: 2190 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2188 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
