ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092597.1| Homo sapiens BAC clone RP11-100N21 from 4, comple... 42 0.64
2gb|AC163104.2| Mus musculus BAC clone RP23-332A4 from chromosome... 40 2.5
3gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 40 2.5
4gb|U00027.2|YSCH9986 Saccharomyces cerevisiae chromosome VIII co... 40 2.5
5ref|XM_803229.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 2.5
6gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete s... 40 2.5
7gb|AC102472.7| Mus musculus, clone RP24-380G1, complete sequence 40 2.5
8gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, com... 40 2.5
9gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 ma... 40 2.5
10gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome 40 2.5
11emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section... 40 2.5
12gb|U31376.1|SCU31376 Saccharomyces cerevisiae putative Upf1p-int... 40 2.5
13gb|U31347.1|SCU31347 Saccharomyces cerevisiae putative Upf1p-int... 40 2.5
14gb|AC005723.1| Homo sapiens chromosome 5, BAC clone 194j15 (LBNL... 38 10.0
15gb|AE017308.1| Mycoplasma mobile 163K complete genome 38 10.0
16ref|XM_424637.1| PREDICTED: Gallus gallus similar to MGC53772 pr... 38 10.0
17gb|AC134433.3| Mus musculus BAC clone RP24-405A4 from chromosome... 38 10.0
18gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome... 38 10.0
19gb|AC139318.5| Mus musculus BAC clone RP24-498K8 from chromosome... 38 10.0
20gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, c... 38 10.0
21emb|AL596326.5| Human DNA sequence from clone RP11-373J16 on chr... 38 10.0
22emb|AL590684.12| Human DNA sequence from clone RP11-168K19 on ch... 38 10.0
23emb|AL033381.2|HS856G1 Human DNA sequence from clone RP5-856G1 o... 38 10.0
24emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 10.0
25emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on ch... 38 10.0
26gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complet... 38 10.0
27gb|AC116563.4| Homo sapiens BAC clone RP11-714L20 from 4, comple... 38 10.0
28gb|AC108064.3| Homo sapiens BAC clone RP11-485C11 from 4, comple... 38 10.0
29gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, compl... 38 10.0
30gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, comple... 38 10.0
31gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 38 10.0
32emb|BX936188.2| Gallus gallus finished cDNA, clone ChEST146h1 38 10.0
33gb|AC012173.9| Homo sapiens chromosome 16 clone RP11-152P23, com... 38 10.0
34emb|BX950778.1| Gallus gallus finished cDNA, clone ChEST719b15 38 10.0
35gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 38 10.0
36gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 38 10.0
37gb|AC069451.11|AC069451 Mus musculus BAC MGS3-404F4 (Genome Sys... 38 10.0
38emb|BX931355.1| Gallus gallus finished cDNA, clone ChEST337k5 38 10.0
39emb|BX931740.1| Gallus gallus finished cDNA, clone ChEST738f1 38 10.0
40gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, comp... 38 10.0
41gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, co... 38 10.0
42gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, co... 38 10.0
43gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, com... 38 10.0
44dbj|AB008268.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 10.0
45gb|AF127485.1|MMC3HUBE4 Mus musculus ubiquitin activating enzyme... 38 10.0
46gb|AC007585.15|AC007585 Mus musculus BAC GSMB-250J8 (Genome Sys... 38 10.0
47gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, co... 38 10.0
48dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 10.0
49gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 38 10.0
50gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, co... 38 10.0
51emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chro... 38 10.0
52dbj|AP001538.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 38 10.0 
>gb|AC092597.1| Homo sapiens BAC clone RP11-100N21 from 4, complete sequence
          Length = 168177

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 47     acgaattaaaaaagtaaaagg 67
              |||||||||||||||||||||
Sbjct: 144444 acgaattaaaaaagtaaaagg 144464
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>gb|AC163104.2| Mus musculus BAC clone RP23-332A4 from chromosome 6, complete sequence
          Length = 195179

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 105   atgtaaaaccccaagggaaattcc 128
             ||||||||||||||| ||||||||
Sbjct: 71042 atgtaaaaccccaagtgaaattcc 71019
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 92    attttgtaataacatgtaaaaccccaag 119
             ||||||| |||||||||||| |||||||
Sbjct: 73913 attttgtgataacatgtaaagccccaag 73940
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>gb|U00027.2|YSCH9986 Saccharomyces cerevisiae chromosome VIII cosmid 9986
          Length = 41666

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ggttgcaaaaatctttcaca 179
             ||||||||||||||||||||
Sbjct: 21815 ggttgcaaaaatctttcaca 21796
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>ref|XM_803229.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506025.20) partial mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  catgtaaaaccccaagggaa 123
            ||||||||||||||||||||
Sbjct: 1398 catgtaaaaccccaagggaa 1379
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>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 42    cttccacgaattaaaaaagtaaaa 65
             ||||||| ||||||||||||||||
Sbjct: 61353 cttccacaaattaaaaaagtaaaa 61330
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>gb|AC102472.7| Mus musculus, clone RP24-380G1, complete sequence
          Length = 187010

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   caaaaatctttcacatatgg 184
             ||||||||||||||||||||
Sbjct: 32785 caaaaatctttcacatatgg 32804
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>gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, complete sequence
          Length = 165131

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caaaaatctttcacatatgg 184
            ||||||||||||||||||||
Sbjct: 5369 caaaaatctttcacatatgg 5350
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>gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 map 4q25, complete sequence
          Length = 127098

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    accattttgtaataacatgt 108
             ||||||||||||||||||||
Sbjct: 16849 accattttgtaataacatgt 16830
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>gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome
          Length = 134416

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gaacaacacaacgctaccaa 26
             ||||||||||||||||||||
Sbjct: 10537 gaacaacacaacgctaccaa 10556
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>emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section 12 of 21): from 2207806 to
             2409180
          Length = 201375

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     gaacaacacaacgctaccaa 26
             ||||||||||||||||||||
Sbjct: 67303 gaacaacacaacgctaccaa 67284
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>gb|U31376.1|SCU31376 Saccharomyces cerevisiae putative Upf1p-interacting protein Nmd3p
           (NMD3) gene, complete cds
          Length = 2000

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 ggttgcaaaaatctttcaca 179
           ||||||||||||||||||||
Sbjct: 398 ggttgcaaaaatctttcaca 379
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>gb|U31347.1|SCU31347 Saccharomyces cerevisiae putative Upf1p-interacting truncated
           protein Nmd3p (NMD3) gene, complete cds
          Length = 1999

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 ggttgcaaaaatctttcaca 179
           ||||||||||||||||||||
Sbjct: 397 ggttgcaaaaatctttcaca 378
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>gb|AC005723.1| Homo sapiens chromosome 5, BAC clone 194j15 (LBNL H137) - BAC clone
             35G8 (LBNL H138) - BAC clone 194o13 (LBNL H106),  complete
             sequence
          Length = 127766

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    aataacatgtaaaacccca 117
             |||||||||||||||||||
Sbjct: 94747 aataacatgtaaaacccca 94765
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aattaaaaaagtaaaaggt 68
              |||||||||||||||||||
Sbjct: 761202 aattaaaaaagtaaaaggt 761184
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>ref|XM_424637.1| PREDICTED: Gallus gallus similar to MGC53772 protein (LOC427039),
           partial mRNA
          Length = 597

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  aagtaaaaggttcgttcca 76
           |||||||||||||||||||
Sbjct: 468 aagtaaaaggttcgttcca 450
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>gb|AC134433.3| Mus musculus BAC clone RP24-405A4 from chromosome Y, complete sequence
          Length = 124148

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   ataacatgtaaaaccccaa 118
             |||||||||||||||||||
Sbjct: 23377 ataacatgtaaaaccccaa 23359
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>gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome 12, complete sequence
          Length = 225930

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     acaacgctaccaatattat 32
              |||||||||||||||||||
Sbjct: 139282 acaacgctaccaatattat 139300
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>gb|AC139318.5| Mus musculus BAC clone RP24-498K8 from chromosome Y, complete sequence
          Length = 194810

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 100    ataacatgtaaaaccccaa 118
              |||||||||||||||||||
Sbjct: 163645 ataacatgtaaaaccccaa 163627



 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   ataacatgtaaaaccccaa 118
             |||||||||||||||||||
Sbjct: 28545 ataacatgtaaaaccccaa 28563
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>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence
          Length = 174600

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    gctaccaatattattacagcatc 41
             |||||||||||||||||| ||||
Sbjct: 84134 gctaccaatattattacatcatc 84156
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>emb|AL596326.5| Human DNA sequence from clone RP11-373J16 on chromosome 1 Contains the 3'
              end of a novel gene, a glyceraldehyde-3-phosphate
              dehydrogenase (GAPD) pseudogene and a CpG island, complete
              sequence
          Length = 178309

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 166    aaaaatctttcacatatgg 184
              |||||||||||||||||||
Sbjct: 128875 aaaaatctttcacatatgg 128857
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>emb|AL590684.12| Human DNA sequence from clone RP11-168K19 on chromosome 6 Contains
            the 5' end of a novel gene, complete sequence
          Length = 24401

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 91   cattttgtaataacatgta 109
            |||||||||||||||||||
Sbjct: 7154 cattttgtaataacatgta 7172
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>emb|AL033381.2|HS856G1 Human DNA sequence from clone RP5-856G1 on chromosome 6p24.1-25.3,
             complete sequence
          Length = 151795

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 152   aaatcctgggttgcaaaaa 170
             |||||||||||||||||||
Sbjct: 38003 aaatcctgggttgcaaaaa 37985
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>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1715506

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 50      aattaaaaaagtaaaaggt 68
               |||||||||||||||||||
Sbjct: 1670277 aattaaaaaagtaaaaggt 1670295
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>emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on chromosome 11 Contains the
             Lcp2 gene for lymphocyte cytosolic protein 2,  the 5' end
             of a novel gene and a novel gene, complete sequence
          Length = 186087

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   aaccccaagggaaattccc 129
             |||||||||||||||||||
Sbjct: 11159 aaccccaagggaaattccc 11141
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>gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complete sequence
          Length = 179139

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 81078 aattaaaaaagtaaaaggt 81096
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>gb|AC116563.4| Homo sapiens BAC clone RP11-714L20 from 4, complete sequence
          Length = 96961

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 165   caaaaatctttcacatatg 183
             |||||||||||||||||||
Sbjct: 19316 caaaaatctttcacatatg 19298
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>gb|AC108064.3| Homo sapiens BAC clone RP11-485C11 from 4, complete sequence
          Length = 104623

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 92    attttgtaataacatgtaa 110
             |||||||||||||||||||
Sbjct: 60096 attttgtaataacatgtaa 60078
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>gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, complete sequence
          Length = 162837

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 164    gcaaaaatctttcacatat 182
              |||||||||||||||||||
Sbjct: 101709 gcaaaaatctttcacatat 101727
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>gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, complete sequence
          Length = 213167

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     aataacatgtaaaacccca 117
              |||||||||||||||||||
Sbjct: 127991 aataacatgtaaaacccca 128009
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 54      aaaaaagtaaaaggttcgttcca 76
               ||||||||||||||| |||||||
Sbjct: 2739877 aaaaaagtaaaaggtgcgttcca 2739855
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>emb|BX936188.2| Gallus gallus finished cDNA, clone ChEST146h1
          Length = 1382

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  aagtaaaaggttcgttcca 76
           |||||||||||||||||||
Sbjct: 226 aagtaaaaggttcgttcca 208
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>gb|AC012173.9| Homo sapiens chromosome 16 clone RP11-152P23, complete sequence
          Length = 74925

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    tattacagcatccttccac 48
             |||||||||||||||||||
Sbjct: 10540 tattacagcatccttccac 10558
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>emb|BX950778.1| Gallus gallus finished cDNA, clone ChEST719b15
          Length = 1401

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  aagtaaaaggttcgttcca 76
           |||||||||||||||||||
Sbjct: 245 aagtaaaaggttcgttcca 227
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>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      aacaacacaacgctaccaa 26
              |||||||||||||||||||
Sbjct: 132281 aacaacacaacgctaccaa 132299
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>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 162    ttgcaaaaatctttcacat 180
              |||||||||||||||||||
Sbjct: 150368 ttgcaaaaatctttcacat 150350
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>gb|AC069451.11|AC069451 Mus musculus  BAC MGS3-404F4 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 122914

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   ataacatgtaaaaccccaa 118
             |||||||||||||||||||
Sbjct: 99175 ataacatgtaaaaccccaa 99157
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>emb|BX931355.1| Gallus gallus finished cDNA, clone ChEST337k5
          Length = 1394

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  aagtaaaaggttcgttcca 76
           |||||||||||||||||||
Sbjct: 238 aagtaaaaggttcgttcca 220
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>emb|BX931740.1| Gallus gallus finished cDNA, clone ChEST738f1
          Length = 889

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  aagtaaaaggttcgttcca 76
           |||||||||||||||||||
Sbjct: 230 aagtaaaaggttcgttcca 212
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>gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, complete sequence
          Length = 65183

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 28740 aattaaaaaagtaaaaggt 28722
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>gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, complete sequence
          Length = 178845

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 92868 aattaaaaaagtaaaaggt 92850
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>gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, complete sequence
          Length = 194789

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 73869 aattaaaaaagtaaaaggt 73851
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>gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, complete sequence
          Length = 151383

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 25473 aattaaaaaagtaaaaggt 25491
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>dbj|AB008268.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSJ1
          Length = 83594

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 121   gaaattccctgctcttcta 139
             |||||||||||||||||||
Sbjct: 11928 gaaattccctgctcttcta 11946
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>gb|AF127485.1|MMC3HUBE4 Mus musculus ubiquitin activating enzyme E1 (Ube1y1) gene, exons 15
            and 16
          Length = 1184

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 100  ataacatgtaaaaccccaa 118
            |||||||||||||||||||
Sbjct: 1097 ataacatgtaaaaccccaa 1079
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>gb|AC007585.15|AC007585 Mus musculus  BAC GSMB-250J8 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 106482

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   ataacatgtaaaaccccaa 118
             |||||||||||||||||||
Sbjct: 23653 ataacatgtaaaaccccaa 23635
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>gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, complete sequence
          Length = 192478

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 27940 aattaaaaaagtaaaaggt 27958
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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    aaaaaagtaaaaggttcgt 72
             |||||||||||||||||||
Sbjct: 68000 aaaaaagtaaaaggttcgt 68018
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      aacaacacaacgctaccaa 26
              |||||||||||||||||||
Sbjct: 771482 aacaacacaacgctaccaa 771464
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>gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, complete sequence
          Length = 201265

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aattaaaaaagtaaaaggt 68
             |||||||||||||||||||
Sbjct: 56420 aattaaaaaagtaaaaggt 56438
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>emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chromosome 4, complete
              sequence
          Length = 210306

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     ttgtaataacatgtaaaac 113
              |||||||||||||||||||
Sbjct: 105992 ttgtaataacatgtaaaac 105974
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>dbj|AP001538.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B853K11,
             LL56-APP region, complete sequence
          Length = 174019

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    aaaaaagtaaaaggttcgt 72
             |||||||||||||||||||
Sbjct: 76789 aaaaaagtaaaaggttcgt 76807


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,082,282
Number of Sequences: 3902068
Number of extensions: 2082282
Number of successful extensions: 152688
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152489
Number of HSP's gapped (non-prelim): 199
length of query: 200
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 178
effective length of database: 17,147,199,772
effective search space: 3052201559416
effective search space used: 3052201559416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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