ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL645757.13| Mouse DNA sequence from clone DN-340J1 on chrom... 40 0.18
2emb|AL691436.7| Mouse DNA sequence from clone RP23-357M4 on chro... 40 0.18
3ref|XM_361951.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 0.73
4gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, com... 36 2.9

>emb|AL645757.13| Mouse DNA sequence from clone DN-340J1 on chromosome 3, complete sequence
          Length = 134040

 Score = 40.1 bits (20), Expect = 0.18
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     aaagggaaagcttgcttctg 30
              ||||||||||||||||||||
Sbjct: 131491 aaagggaaagcttgcttctg 131510



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>emb|AL691436.7| Mouse DNA sequence from clone RP23-357M4 on chromosome 3, complete
             sequence
          Length = 66628

 Score = 40.1 bits (20), Expect = 0.18
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aaagggaaagcttgcttctg 30
             ||||||||||||||||||||
Sbjct: 45219 aaagggaaagcttgcttctg 45238



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>ref|XM_361951.1| Magnaporthe grisea 70-15 hypothetical protein (MG04396.4) partial cds
          Length = 3579

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 13   agggaaagcttgcttctgg 31
            |||||||||||||||||||
Sbjct: 2505 agggaaagcttgcttctgg 2487



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>gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, complete sequence
          Length = 210133

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 12    aagggaaagcttgcttctgggt 33
             ||||||||| ||||||||||||
Sbjct: 61784 aagggaaaggttgcttctgggt 61805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 247,620
Number of Sequences: 3902068
Number of extensions: 247620
Number of successful extensions: 62852
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62845
Number of HSP's gapped (non-prelim): 7
length of query: 33
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 13
effective length of database: 17,155,003,908
effective search space: 223015050804
effective search space used: 223015050804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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