ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIR_HUMAN (O00625) Pirin 51 8e-07
2PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590 51 8e-07
3PIR_MOUSE (Q9D711) Pirin 50 1e-06
4PIRL4_ARATH (Q9LX45) Putative pirin-like protein At3g59260 50 1e-06
5PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120 49 3e-06
6PRN1_ARATH (Q9LX49) Pirin 1 (AtPirin1) 48 7e-06
7PIRL_LYCES (Q9SEE4) Pirin-like protein 46 3e-05
8Y481_CAUCR (P58112) Hypothetical protein CC0481 38 0.007
9Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240 38 0.007
10PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) ... 35 0.045
11Y2418_PSEAE (Q9I163) Hypothetical protein PA2418 34 0.077
12Y3769_VIBCH (Q9KKY1) Hypothetical protein VCA0969 34 0.10
13Y1242_SYNY3 (P42349) Hypothetical methyltransferase sll1242 (EC ... 33 0.13
14MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 ant... 32 0.50
15SPTA1_HUMAN (P02549) Spectrin alpha chain, erythrocyte (Erythroi... 31 0.85
16SPTA1_MOUSE (P08032) Spectrin alpha chain, erythrocyte (Erythroi... 30 1.1
17NAP5_HUMAN (O14513) Nck-associated protein 5 (NAP-5) (Fragment) 30 1.9
18ESCA_ARATH (Q9S7C9) Putative DNA-binding protein ESCAROLA 29 2.5
19Y133_THEAC (Q9HLU2) Hypothetical protein Ta0133 29 2.5
20MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronc... 29 3.2
21B028_CAEEL (P41996) Cytokinesis protein B0280.5 precursor 29 3.2
22YJU7_YEAST (P39526) Hypothetical 229.9 kDa protein in NUC1-NCE1 ... 28 7.2
23HIS4_DECAR (Q47AM2) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami... 27 9.4
24CAPP_VIBPA (Q87L54) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... 27 9.4
25CAPP_PHOPR (Q6LVH1) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... 27 9.4

>PIR_HUMAN (O00625) Pirin|
          Length = 290

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221
           L+A  P  E V   GPFVMNT+EE+ QA  D+ N ++GFE A  W S
Sbjct: 240 LIAGEPLREPVIQHGPFVMNTNEEISQAILDFRNAKNGFERAKTWKS 286



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>PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590|
          Length = 310

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221
           L+A  P GE +   GPFVMNT EE+ +  +D+ N R+GFE A  W S
Sbjct: 255 LVAGEPIGEPMVQFGPFVMNTQEEIDETIDDFENFRNGFEKARHWKS 301



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>PIR_MOUSE (Q9D711) Pirin|
          Length = 290

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221
           L+A  P  E V   GPFVMNT+EE+ QA  D+ N ++GFE A  W S
Sbjct: 240 LIAGEPLREPVVQHGPFVMNTNEEISQAILDFRNAKNGFEGARTWKS 286



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>PIRL4_ARATH (Q9LX45) Putative pirin-like protein At3g59260|
          Length = 271

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 22/47 (46%), Positives = 29/47 (61%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221
           L+A  P GE V   GPFVMN+ +E++    DY N  +GFE+A  W S
Sbjct: 224 LIAGEPIGEPVVQHGPFVMNSQDEIEMTIGDYRNGMNGFEMAKHWRS 270



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>PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120|
          Length = 296

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 23/47 (48%), Positives = 28/47 (59%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221
           L+A  P GE V   GPFVMNT  E+    EDY   ++GFE+A  W S
Sbjct: 249 LIAGEPIGEPVVQYGPFVMNTQAEIDMTIEDYHYGKNGFEMAKYWRS 295



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>PRN1_ARATH (Q9LX49) Pirin 1 (AtPirin1)|
          Length = 287

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELA 236
           L+A  P GE V   GPFVMN+  E+  A +DY N ++GFE+A
Sbjct: 244 LIAGEPIGEPVVQCGPFVMNSQAEIDMAFDDYQNAKNGFEMA 285



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>PIRL_LYCES (Q9SEE4) Pirin-like protein|
          Length = 291

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221
           L+  +P  E V   GPFVMNT  E+ QA +DY   ++GFE +  W S
Sbjct: 244 LIGGQPINEPVVQYGPFVMNTKSEIMQAYQDYQLGKNGFERSRQWYS 290



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>Y481_CAUCR (P58112) Hypothetical protein CC0481|
          Length = 276

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 19/36 (52%), Positives = 23/36 (63%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRR 254
           LLA RP GE V   GPFVM+T E + QA +D+   R
Sbjct: 240 LLAGRPIGEPVFWHGPFVMDTREGLMQAFDDFQRGR 275



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>Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240|
          Length = 285

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDY 266
           +LA +P  E +   GPFVMN+ EE++QA  DY
Sbjct: 247 VLAGKPLHEPIVQYGPFVMNSREEIEQALRDY 278



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>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous T-cell|
            lymphoma associated antigen se14-3) (CTCL tumor antigen
            se14-3) (Zinc finger MYND domain containing protein 8)
          Length = 1186

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 165  FCCWPTNVCECTAMVGHWPEDQPAANSKPLRRFR*SSLACCTSSLVFITKGPSIATASPC 344
            +CCW T+ C+      HWPE   +         + +     T +L   ++G S +T S  
Sbjct: 1038 YCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAP 1097

Query: 345  GRAAS 359
               AS
Sbjct: 1098 SETAS 1102



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>Y2418_PSEAE (Q9I163) Hypothetical protein PA2418|
          Length = 286

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRR 254
           +L+  P  E +   GPFVM++ EE+ QA ED+ N R
Sbjct: 246 VLSGEPLDEPIIGYGPFVMSSREEIDQAIEDFENGR 281



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>Y3769_VIBCH (Q9KKY1) Hypothetical protein VCA0969|
          Length = 282

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDY 266
           LL  +P  E V   GPFVMN+  E++QA  DY
Sbjct: 243 LLMGQPIDEPVVHYGPFVMNSMAEIEQAIRDY 274



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>Y1242_SYNY3 (P42349) Hypothetical methyltransferase sll1242 (EC 2.1.1.-) (ORF|
           N)
          Length = 536

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -1

Query: 352 ARPHGEAVAMDGPFVMNTSEEVQQAREDYL 263
           A+ HG+ VA+ GPF  +  +EVQ A  D+L
Sbjct: 88  AKAHGKLVAVGGPFATSVPDEVQNAGADFL 117



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>MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 antigen)|
           (Hepatocellular carcinoma-associated protein 1)
          Length = 957

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = +1

Query: 118 ITTGPGKKIHAMPSTA-SVVGPPMFVNARLWSVT-----GQRTSRRPTRSRCGGSGSPP 276
           I+ GPG  +   PS   S  GPP        SVT     G+ TSR PT S    +  PP
Sbjct: 96  ISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPP 154



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>SPTA1_HUMAN (P02549) Spectrin alpha chain, erythrocyte (Erythroid|
           alpha-spectrin)
          Length = 2418

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFE 242
           P    V   GP V+ T+EE+Q+ R++ L R   F+
Sbjct: 5   PKETVVESSGPKVLETAEEIQERRQEVLTRYQSFK 39



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>SPTA1_MOUSE (P08032) Spectrin alpha chain, erythrocyte (Erythroid|
           alpha-spectrin)
          Length = 2415

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFE 242
           P   AV   GP V+ T+EE+Q  R + LN+   F+
Sbjct: 4   PKETAVESSGPKVLETAEEIQHRRAEVLNQYQRFK 38



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>NAP5_HUMAN (O14513) Nck-associated protein 5 (NAP-5) (Fragment)|
          Length = 416

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 317 PLRDEHERGGATGQGGLPEPPQ 252
           P RDEH   GA  +G +P PPQ
Sbjct: 250 PTRDEHCGSGAGARGEIPSPPQ 271



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>ESCA_ARATH (Q9S7C9) Putative DNA-binding protein ESCAROLA|
          Length = 311

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -3

Query: 317 PLRDEHERGGATGQGGLPEPPQRLRVGRRLVLWPVTDHSRAFTNIGG 177
           P+ +E E GG  G GG   PPQ  +         VT   +   N+GG
Sbjct: 243 PIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGVTGQGQLGGNVGG 289



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>Y133_THEAC (Q9HLU2) Hypothetical protein Ta0133|
          Length = 261

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 358 LAARPHGEAVAMDGPFVMNTSEEVQQA 278
           LA +P  E +A  GP VMNT +++ QA
Sbjct: 217 LAGKPLNEPIAWYGPIVMNTRDQLIQA 243



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>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = +1

Query: 121 TTGPGKKIHAMPSTASVVGPPMFVNARLWS----VTGQRTSRRPTRSRCGGSGSPPWPV 285
           T+GPG  +  +P+T++   P     +   +    V    T+  PT S   G G+ P PV
Sbjct: 117 TSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPV 175



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>B028_CAEEL (P41996) Cytokinesis protein B0280.5 precursor|
          Length = 524

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = +3

Query: 168 CCWPTNVCECTAMVGHWPEDQPAANSKPLRRFR*SSLACCTSSLVFITKGPSIATASPCG 347
           C WP +V EC  +    P  QP             S   C+SS    T G +I    P G
Sbjct: 290 CDWPRDVAECAGL----PTPQPTCEEDGY-----FSFGQCSSSFTACTNGRAIVMFCPAG 340



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>YJU7_YEAST (P39526) Hypothetical 229.9 kDa protein in NUC1-NCE1 intergenic|
           region
          Length = 2014

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 35  SFAGNNTYISTRTLYFPGPLNWIL 106
           SF  NNT  ++  LYF G L WIL
Sbjct: 569 SFIKNNTTSTSSNLYFKGLLCWIL 592



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>HIS4_DECAR (Q47AM2) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 246

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 149 ACIFFPGPVVIGLASKSNSMA 87
           AC+ FPG +++GL +K   +A
Sbjct: 118 ACVAFPGHIIVGLDAKDGKVA 138



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>CAPP_VIBPA (Q87L54) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 877

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
 Frame = -3

Query: 302 HERGGATGQGGLP-------EPPQRLRVGRRL 228
           H RGG  G+GG P       +PP+ L+ G R+
Sbjct: 577 HGRGGTVGRGGAPAHAALLSQPPKSLKGGLRV 608



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>CAPP_PHOPR (Q6LVH1) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 876

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 7/32 (21%)
 Frame = -3

Query: 302 HERGGATGQGGLP-------EPPQRLRVGRRL 228
           H RGG+ G+GG P       +PP+ L+ G R+
Sbjct: 576 HGRGGSIGRGGAPAHAALLSQPPRSLKGGLRV 607


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,877,195
Number of Sequences: 219361
Number of extensions: 980449
Number of successful extensions: 3099
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3099
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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