Clone Name | rbart51g03 |
---|---|
Clone Library Name | barley_pub |
>PIR_HUMAN (O00625) Pirin| Length = 290 Score = 50.8 bits (120), Expect = 8e-07 Identities = 24/47 (51%), Positives = 30/47 (63%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221 L+A P E V GPFVMNT+EE+ QA D+ N ++GFE A W S Sbjct: 240 LIAGEPLREPVIQHGPFVMNTNEEISQAILDFRNAKNGFERAKTWKS 286
>PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590| Length = 310 Score = 50.8 bits (120), Expect = 8e-07 Identities = 23/47 (48%), Positives = 30/47 (63%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221 L+A P GE + GPFVMNT EE+ + +D+ N R+GFE A W S Sbjct: 255 LVAGEPIGEPMVQFGPFVMNTQEEIDETIDDFENFRNGFEKARHWKS 301
>PIR_MOUSE (Q9D711) Pirin| Length = 290 Score = 50.4 bits (119), Expect = 1e-06 Identities = 24/47 (51%), Positives = 30/47 (63%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221 L+A P E V GPFVMNT+EE+ QA D+ N ++GFE A W S Sbjct: 240 LIAGEPLREPVVQHGPFVMNTNEEISQAILDFRNAKNGFEGARTWKS 286
>PIRL4_ARATH (Q9LX45) Putative pirin-like protein At3g59260| Length = 271 Score = 50.1 bits (118), Expect = 1e-06 Identities = 22/47 (46%), Positives = 29/47 (61%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221 L+A P GE V GPFVMN+ +E++ DY N +GFE+A W S Sbjct: 224 LIAGEPIGEPVVQHGPFVMNSQDEIEMTIGDYRNGMNGFEMAKHWRS 270
>PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120| Length = 296 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/47 (48%), Positives = 28/47 (59%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221 L+A P GE V GPFVMNT E+ EDY ++GFE+A W S Sbjct: 249 LIAGEPIGEPVVQYGPFVMNTQAEIDMTIEDYHYGKNGFEMAKYWRS 295
>PRN1_ARATH (Q9LX49) Pirin 1 (AtPirin1)| Length = 287 Score = 47.8 bits (112), Expect = 7e-06 Identities = 21/42 (50%), Positives = 28/42 (66%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELA 236 L+A P GE V GPFVMN+ E+ A +DY N ++GFE+A Sbjct: 244 LIAGEPIGEPVVQCGPFVMNSQAEIDMAFDDYQNAKNGFEMA 285
>PIRL_LYCES (Q9SEE4) Pirin-like protein| Length = 291 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/47 (44%), Positives = 28/47 (59%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFELAAGWSS 221 L+ +P E V GPFVMNT E+ QA +DY ++GFE + W S Sbjct: 244 LIGGQPINEPVVQYGPFVMNTKSEIMQAYQDYQLGKNGFERSRQWYS 290
>Y481_CAUCR (P58112) Hypothetical protein CC0481| Length = 276 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/36 (52%), Positives = 23/36 (63%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRR 254 LLA RP GE V GPFVM+T E + QA +D+ R Sbjct: 240 LLAGRPIGEPVFWHGPFVMDTREGLMQAFDDFQRGR 275
>Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240| Length = 285 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDY 266 +LA +P E + GPFVMN+ EE++QA DY Sbjct: 247 VLAGKPLHEPIVQYGPFVMNSREEIEQALRDY 278
>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous T-cell| lymphoma associated antigen se14-3) (CTCL tumor antigen se14-3) (Zinc finger MYND domain containing protein 8) Length = 1186 Score = 35.0 bits (79), Expect = 0.045 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = +3 Query: 165 FCCWPTNVCECTAMVGHWPEDQPAANSKPLRRFR*SSLACCTSSLVFITKGPSIATASPC 344 +CCW T+ C+ HWPE + + + T +L ++G S +T S Sbjct: 1038 YCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAP 1097 Query: 345 GRAAS 359 AS Sbjct: 1098 SETAS 1102
>Y2418_PSEAE (Q9I163) Hypothetical protein PA2418| Length = 286 Score = 34.3 bits (77), Expect = 0.077 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDYLNRR 254 +L+ P E + GPFVM++ EE+ QA ED+ N R Sbjct: 246 VLSGEPLDEPIIGYGPFVMSSREEIDQAIEDFENGR 281
>Y3769_VIBCH (Q9KKY1) Hypothetical protein VCA0969| Length = 282 Score = 33.9 bits (76), Expect = 0.10 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 Query: 361 LLAARPHGEAVAMDGPFVMNTSEEVQQAREDY 266 LL +P E V GPFVMN+ E++QA DY Sbjct: 243 LLMGQPIDEPVVHYGPFVMNSMAEIEQAIRDY 274
>Y1242_SYNY3 (P42349) Hypothetical methyltransferase sll1242 (EC 2.1.1.-) (ORF| N) Length = 536 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -1 Query: 352 ARPHGEAVAMDGPFVMNTSEEVQQAREDYL 263 A+ HG+ VA+ GPF + +EVQ A D+L Sbjct: 88 AKAHGKLVAVGGPFATSVPDEVQNAGADFL 117
>MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 antigen)| (Hepatocellular carcinoma-associated protein 1) Length = 957 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = +1 Query: 118 ITTGPGKKIHAMPSTA-SVVGPPMFVNARLWSVT-----GQRTSRRPTRSRCGGSGSPP 276 I+ GPG + PS S GPP SVT G+ TSR PT S + PP Sbjct: 96 ISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPP 154
>SPTA1_HUMAN (P02549) Spectrin alpha chain, erythrocyte (Erythroid| alpha-spectrin) Length = 2418 Score = 30.8 bits (68), Expect = 0.85 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -1 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFE 242 P V GP V+ T+EE+Q+ R++ L R F+ Sbjct: 5 PKETVVESSGPKVLETAEEIQERRQEVLTRYQSFK 39
>SPTA1_MOUSE (P08032) Spectrin alpha chain, erythrocyte (Erythroid| alpha-spectrin) Length = 2415 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRSGFE 242 P AV GP V+ T+EE+Q R + LN+ F+ Sbjct: 4 PKETAVESSGPKVLETAEEIQHRRAEVLNQYQRFK 38
>NAP5_HUMAN (O14513) Nck-associated protein 5 (NAP-5) (Fragment)| Length = 416 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -3 Query: 317 PLRDEHERGGATGQGGLPEPPQ 252 P RDEH GA +G +P PPQ Sbjct: 250 PTRDEHCGSGAGARGEIPSPPQ 271
>ESCA_ARATH (Q9S7C9) Putative DNA-binding protein ESCAROLA| Length = 311 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -3 Query: 317 PLRDEHERGGATGQGGLPEPPQRLRVGRRLVLWPVTDHSRAFTNIGG 177 P+ +E E GG G GG PPQ + VT + N+GG Sbjct: 243 PIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGVTGQGQLGGNVGG 289
>Y133_THEAC (Q9HLU2) Hypothetical protein Ta0133| Length = 261 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 358 LAARPHGEAVAMDGPFVMNTSEEVQQA 278 LA +P E +A GP VMNT +++ QA Sbjct: 217 LAGKPLNEPIAWYGPIVMNTRDQLIQA 243
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +1 Query: 121 TTGPGKKIHAMPSTASVVGPPMFVNARLWS----VTGQRTSRRPTRSRCGGSGSPPWPV 285 T+GPG + +P+T++ P + + V T+ PT S G G+ P PV Sbjct: 117 TSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPV 175
>B028_CAEEL (P41996) Cytokinesis protein B0280.5 precursor| Length = 524 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/60 (30%), Positives = 22/60 (36%) Frame = +3 Query: 168 CCWPTNVCECTAMVGHWPEDQPAANSKPLRRFR*SSLACCTSSLVFITKGPSIATASPCG 347 C WP +V EC + P QP S C+SS T G +I P G Sbjct: 290 CDWPRDVAECAGL----PTPQPTCEEDGY-----FSFGQCSSSFTACTNGRAIVMFCPAG 340
>YJU7_YEAST (P39526) Hypothetical 229.9 kDa protein in NUC1-NCE1 intergenic| region Length = 2014 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 Query: 35 SFAGNNTYISTRTLYFPGPLNWIL 106 SF NNT ++ LYF G L WIL Sbjct: 569 SFIKNNTTSTSSNLYFKGLLCWIL 592
>HIS4_DECAR (Q47AM2) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 246 Score = 27.3 bits (59), Expect = 9.4 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -3 Query: 149 ACIFFPGPVVIGLASKSNSMA 87 AC+ FPG +++GL +K +A Sbjct: 118 ACVAFPGHIIVGLDAKDGKVA 138
>CAPP_VIBPA (Q87L54) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 877 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 7/32 (21%) Frame = -3 Query: 302 HERGGATGQGGLP-------EPPQRLRVGRRL 228 H RGG G+GG P +PP+ L+ G R+ Sbjct: 577 HGRGGTVGRGGAPAHAALLSQPPKSLKGGLRV 608
>CAPP_PHOPR (Q6LVH1) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 876 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 7/32 (21%) Frame = -3 Query: 302 HERGGATGQGGLP-------EPPQRLRVGRRL 228 H RGG+ G+GG P +PP+ L+ G R+ Sbjct: 576 HGRGGSIGRGGAPAHAALLSQPPRSLKGGLRV 607 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,877,195 Number of Sequences: 219361 Number of extensions: 980449 Number of successful extensions: 3099 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3099 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)