Clone Name | rbart51g02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SPY_DROME (O44783) Protein sprouty (Spry) | 30 | 1.9 | 2 | UBE3C_MOUSE (Q80U95) Ubiquitin-protein ligase E3C (EC 6.3.2.-) | 28 | 4.3 | 3 | YAS2_SCHPO (Q10138) Hypothetical protein C3H8.02 in chromosome I | 28 | 5.6 | 4 | SDAC_SHIFL (Q83QD0) Serine transporter | 28 | 7.4 | 5 | SDAC_ECOLI (P0AAD6) Serine transporter | 28 | 7.4 | 6 | SDAC_ECO57 (P0AAD7) Serine transporter | 28 | 7.4 | 7 | CO7_HUMAN (P10643) Complement component C7 precursor | 27 | 9.6 |
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>SPY_DROME (O44783) Protein sprouty (Spry)| Length = 589 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +1 Query: 31 PSLETENVCPRNSLCRSITCESVNPLFLLW 120 PSL VCPR CR C+S PL W Sbjct: 370 PSLLNPIVCPRCGRCRCEQCQSPRPLPQTW 399
>UBE3C_MOUSE (Q80U95) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -2 Query: 215 VLYIKSKMIVRIFLSVHGSFEECFYRDVRNVGHRRKR--GFTLSQVILLHRLLRGQTFSV 42 + Y+ S + +S+H + E F + VG R+ FTL ++ILL R LR + Sbjct: 499 LFYLFSSLFSHSLISIHDN--EFFGDPIEVVGQRQSSMMPFTLEELILLSRCLRDACLGI 556 Query: 41 SRL 33 +L Sbjct: 557 IKL 559
>YAS2_SCHPO (Q10138) Hypothetical protein C3H8.02 in chromosome I| Length = 444 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -2 Query: 278 WTIKYEMEASKFLSSAIYMDSVLYIKSKMIVRIFLSVHGSFEECFYRDVRNV 123 +T+K + SS+ + SV Y KS+ + + S HGS F +NV Sbjct: 42 YTVKTHLSDDSSSSSSHRLSSVSYAKSRTRLELTSSSHGSDTRSFNDKTKNV 93
>SDAC_SHIFL (Q83QD0) Serine transporter| Length = 429 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -3 Query: 79 SYIGYYVGRRFQFQGLVISSL 17 S++G+Y+G R F G+VI SL Sbjct: 316 SFLGHYLGAREGFNGMVIKSL 336
>SDAC_ECOLI (P0AAD6) Serine transporter| Length = 429 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -3 Query: 79 SYIGYYVGRRFQFQGLVISSL 17 S++G+Y+G R F G+VI SL Sbjct: 316 SFLGHYLGAREGFNGMVIKSL 336
>SDAC_ECO57 (P0AAD7) Serine transporter| Length = 429 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -3 Query: 79 SYIGYYVGRRFQFQGLVISSL 17 S++G+Y+G R F G+VI SL Sbjct: 316 SFLGHYLGAREGFNGMVIKSL 336
>CO7_HUMAN (P10643) Complement component C7 precursor| Length = 843 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +1 Query: 16 TVMKLPSLETENVCPRNSLCRSITCESVNPLFLLW 120 +V LP + + + P L + + C SV L+L W Sbjct: 409 SVTNLPQVIKQKLTPLYELVKEVPCASVKKLYLKW 443 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,376,517 Number of Sequences: 219361 Number of extensions: 739323 Number of successful extensions: 1519 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1500 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1518 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)