>CCNB3_HUMAN (Q8WWL7) G2/mitotic-specific cyclin-B3|
          Length = 1395

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = +3

Query: 45  KTSSAHKPIKLQKLDRKEDKHKIQTIPLRFSSINEIVNSHKILKQENKVVLHENQPMNFS 224
           K S   KP+ LQK+  +E+    + +P +  S  E     K L QE   +  ++  +   
Sbjct: 597 KMSHLKKPLVLQKITSEEESFYKKLLPFKMKSTTE----EKFLSQEPSALKEKHTTLQEV 652

Query: 225 KLQGKMLQ-SKKLVVHMRSHQLIYGQTVKH 311
            L  + L   +K        Q ++   VKH
Sbjct: 653 SLSKESLAIQEKATTEEEFSQELFSLHVKH 682

>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)|
          Length = 2567

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = +3

Query: 69   IKLQKLDRKEDKHK----IQTIPLRFSSINEIVNSHKILKQENKVVLHENQPMNFSKLQG 236
            ++LQ  + K++KHK    +Q   +R   + +      I+ ++  V+        F K+Q 
Sbjct: 1927 LQLQLEEAKKEKHKLQEQLQVAQMRIEYLEQSTVDRAIVSRQEAVICDLENKTEFQKVQI 1986

Query: 237  KMLQSKKLVVHMRSHQLIYGQTVKHPA 317
            K  +   LV+ +R   +  G+ +   A
Sbjct: 1987 KRFE--VLVIRLRDSLIKMGEELSQAA 2011

>PI3K1_DICDI (P54673) Phosphatidylinositol 3-kinase 1 (EC 2.7.1.137)|
           (PI3-kinase) (PtdIns-3-kinase) (PI3K)
          Length = 1570

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 135 SSINEIVNSHKILKQENKVVLHENQPM-NFSKLQGKMLQSKKL 260
           SS   + N H IL +EN+ + HENQ +    K +G   Q K L
Sbjct: 112 SSGGHVNNGHHILIEENERLEHENQEIQEIYKQKGMEFQKKDL 154

>RABE2_MOUSE (Q91WG2) Rab GTPase-binding effector protein 2 (Rabaptin-5beta)|
          Length = 511

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 147 EIVNSHKILKQENKVVLHENQPMNFSKLQGKMLQSKK 257
           E+  SHK L QE K +  ENQ +   +L    LQ  +
Sbjct: 307 ELATSHKCLSQEVKRLNEENQGLRAEQLPSSALQGSE 343

>P115_MYCPN (P75361) Protein P115 homolog|
          Length = 982

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
 Frame = +3

Query: 6   ETEAQKIPIPLEFKTSSAHKPIKLQKLDRKEDKHKIQTIP--LRFSSINEIVNSHKILKQ 179
           E E +K  I ++ K           +L +K++KHKIQ +   +R           ++LK 
Sbjct: 301 ELEQRKAVIDVQLKN----------ELSKKDEKHKIQALKKLIRVDQAQLESLQAQVLKT 350

Query: 180 ENKVVLHENQPMNFSKLQGKMLQSKKLVVHMRSHQLIYGQ 299
            +++ L  N+    S +Q + L + KL ++  S  L+Y Q
Sbjct: 351 TSEITLLTNE---LSTVQTE-LDTTKLNLNQNSAALVYQQ 386

>K2CO_CHICK (O93532) Keratin, type II cytoskeletal cochleal (Cytokeratin|
           otokeratin)
          Length = 492

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +3

Query: 90  RKEDKHKIQTIPLRFSSINEIVNSHKILKQENKVV 194
           RKE+K +I+T+  RF+S    ++  + L+Q+NK++
Sbjct: 111 RKEEKEQIKTLNNRFAS---FIDKVRFLEQQNKML 142

>NBN_BRARE (Q5I2W8) Nibrin (Nijmegen breakage syndrome protein 1 homolog)|
          Length = 818

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +3

Query: 6   ETEAQKIPIPLEFKTSSAHKPIKLQKLDRKEDKHKIQTIPLRFSSINEIVN-SHKILKQE 182
           +T++++ P  LE  +S+   P K +  + +E K +  +  +     N I   S  +LKQE
Sbjct: 639 QTQSKRSPPDLEAHSSANKGPTKNKTPELEEVKKEEVSFVVNSRPQNGISQTSEAVLKQE 698

Query: 183 NKVVLHENQPMNFSKLQGKMLQ 248
            +     + P N   L  K+LQ
Sbjct: 699 MRASTSNSGPKNDPDLPRKLLQ 720

>LPIN1_MOUSE (Q91ZP3) Lipin-1 (Fatty liver dystrophy protein)|
          Length = 924

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +1

Query: 34  P*SSKHLQLTSQLSYKN----*TERKISIKFKQSP*DLVVSM 147
           P  S HL L S +SYK      +E+  S+K K  P D+V S+
Sbjct: 644 PSGSSHLSLLSNVSYKKTLRLTSEQLKSLKLKNGPNDVVFSV 685

>TLR5_HUMAN (O60602) Toll-like receptor 5 precursor (Toll/interleukin-1|
           receptor-like protein 3)
          Length = 858

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 72  KLQKLDRKEDK----HKIQTIPLRFSSINEIVNSHKILKQENKVVLHENQPMNFSKL 230
           KLQ LD +++     H I +IP  F S N++V   KI    N + L EN+  N   L
Sbjct: 385 KLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDIL 441

>Y6610_BACAN (Q9RMV5) Hypothetical protein pXO2-80/BXB0110/GBAA_pXO2_0110|
          Length = 328

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 99  DKHKIQTIPLRFSSINEIVNSHKILKQE 182
           ++ KI+   LRF+ + EIVN HK   +E
Sbjct: 231 EEKKIEDGELRFNPVEEIVNDHKTEAEE 258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,186,784
Number of Sequences: 219361
Number of extensions: 638195
Number of successful extensions: 1730
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)