ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT005241.3| Pan troglodytes chromosome X clone PTB-093L20 ma... 44 0.27
2emb|AL445930.11| Human DNA sequence from clone RP11-366O20 on ch... 44 0.27
3emb|AL109798.19|HSA558P14 Human DNA sequence from clone RP11-558... 44 0.27
4gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence 44 0.27
5emb|CT009582.3| Pan troglodytes chromosome X clone PTB-130G16 ma... 44 0.27
6gb|AC116871.6| Mus musculus chromosome 19, clone RP24-417P12, co... 42 1.1
7gb|AC112153.4| Mus musculus BAC clone RP24-93G11 from chromosome... 42 1.1
8emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006 42 1.1
9emb|CR407586.6| Zebrafish DNA sequence from clone CH211-283G6 in... 42 1.1
10gb|AC160031.8| Mus musculus 10 BAC RP24-395H7 (Roswell Park Canc... 42 1.1
11dbj|BS000009.1| Pan troglodytes chromosome 22 clone:PTB-118J15, ... 42 1.1
12gb|AF130247.2|AF130247 Homo sapiens clone 31B5 chromosome 21 map... 42 1.1
13emb|BX908722.4| Zebrafish DNA sequence from clone CH211-165A16 i... 42 1.1
14gb|AF130249.1|AF130249 Homo sapiens PAC 126N20 derived from chro... 42 1.1
15dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.1
16gb|AC153512.2| Mus musculus 10 BAC RP23-18K14 (Roswell Park Canc... 42 1.1
17ref|XM_526797.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 4.2
18ref|XM_526796.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 4.2
19gb|AC169505.1| Mus musculus BAC clone RP24-257J8 from chromosome... 40 4.2
20gb|BC047467.1| Homo sapiens hypothetical protein FLJ33167, mRNA ... 40 4.2
21gb|BC064600.1| Homo sapiens hypothetical protein FLJ33167, mRNA ... 40 4.2
22gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, com... 40 4.2
23gb|AC131702.3| Mus musculus BAC clone RP24-177J5 from chromosome... 40 4.2
24emb|AL731540.4| Human DNA sequence from clone RP11-367H5 on chro... 40 4.2
25emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chr... 40 4.2
26emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chr... 40 4.2
27emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on ch... 40 4.2
28emb|AL136325.6| Human DNA sequence from clone RP5-983F16 on chro... 40 4.2
29emb|AL645790.8| Zebrafish DNA sequence from clone RP71-6L08 in l... 40 4.2
30emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
31emb|AL645596.7| Mouse DNA sequence from clone RP23-301E19 on chr... 40 4.2
32emb|BX647575.1|HSM807721 Homo sapiens mRNA; cDNA DKFZp313L1724 (... 40 4.2
33emb|CR932804.1| Mus musculus chromosome 2, clone ResGen-475I1 st... 40 4.2
34emb|CR857205.1| Pongo pygmaeus mRNA; cDNA DKFZp468F1816 (from cl... 40 4.2
35gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 4.2
36gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, com... 40 4.2
37gb|BC099068.1| Xenopus laevis cDNA clone MGC:115737 IMAGE:686886... 40 4.2
38gb|AC079257.7| Homo sapiens BAC clone RP11-367I6 from 4, complet... 40 4.2
39emb|CR606183.1| full-length cDNA clone CS0DI076YD16 of Placenta ... 40 4.2
40dbj|AK057729.1| Homo sapiens cDNA FLJ33167 fis, clone UTERU2000569 40 4.2
41gb|AC092962.4| Homo sapiens 3 BAC RP11-698E5 (Roswell Park Cance... 40 4.2
42gb|AC012294.15| Mus musculus chromosome 11, clone RP23-328G11, c... 40 4.2
43gb|AC107886.2| Homo sapiens chromosome 11, clone CTD-3064C13, co... 40 4.2
44gb|AC092393.3| Homo sapiens chromosome 1 clone RP4-736I12, compl... 40 4.2
45gb|AC122427.6| Mus musculus BAC clone RP24-175C2 from chromosome... 40 4.2
46emb|AL117151.1|CNS01DQF Botrytis cinerea strain T4 cDNA library 40 4.2
47emb|AL929034.17| Mouse DNA sequence from clone RP23-90F9 on chro... 40 4.2
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
49dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.2
50ref|NM_152683.1| Homo sapiens hypothetical protein FLJ33167 (FLJ... 40 4.2
51gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, co... 40 4.2
52dbj|AK120419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
53dbj|AK120245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
54emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 m... 40 4.2
55dbj|AP001038.2| Homo sapiens genomic DNA, chromosome 21, clone:P... 40 4.2
56emb|AL928864.11| Zebrafish DNA sequence from clone CH211-10P21, ... 40 4.2
57gb|AC145946.3| Gallus gallus BAC clone CH261-23O21 from chromoso... 40 4.2
58emb|AL713839.1|CNS07YOT Mus musculus chromosome 11 region in the... 40 4.2
59emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chr... 40 4.2
60emb|AL607034.16| Mouse DNA sequence from clone RP23-303K9 on chr... 40 4.2 
>emb|CT005241.3| Pan troglodytes chromosome X clone PTB-093L20 map Xq28, complete sequence
          Length = 181643

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 175    agcaagaaaataaagtagtactacat 200
              ||||| ||||||||||||||||||||
Sbjct: 171844 agcaacaaaataaagtagtactacat 171819
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>emb|AL445930.11| Human DNA sequence from clone RP11-366O20 on chromosome 9 Contains the
             5' end of a novel gene, the PPP6C gene for protein
             phosphatase 6 (catalytic subunit), a novel gene, a
             phosphoribosyl pyrophosphate synthetase 1(PRPS1)
             pseudogene, a laminin receptor 1 (LAMR1) pseudogene, the
             5' end of the gene for Rab9 effector p40 (RAB9P40), and
             five CpG islands, complete sequence
          Length = 169149

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 175   agcaagaaaataaagtagtact 196
             ||||||||||||||||||||||
Sbjct: 69084 agcaagaaaataaagtagtact 69105
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>emb|AL109798.19|HSA558P14 Human DNA sequence from clone RP11-558P14 on chromosome Xp21.3-22.13
             Contains the 5' end of the CDKL5 gene for cyclin-dependent
             kinase-like 5 and a CpG island, complete sequence
          Length = 95093

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 175   agcaagaaaataaagtagtactacat 200
             ||||| ||||||||||||||||||||
Sbjct: 56210 agcaacaaaataaagtagtactacat 56185
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>gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence
          Length = 130460

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 96     gaagataagcataaaattcaaa 117
              ||||||||||||||||||||||
Sbjct: 126931 gaagataagcataaaattcaaa 126952
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>emb|CT009582.3| Pan troglodytes chromosome X clone PTB-130G16 map Xq28, complete
             sequence
          Length = 195752

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 175   agcaagaaaataaagtagtactacat 200
             ||||| ||||||||||||||||||||
Sbjct: 54553 agcaacaaaataaagtagtactacat 54528
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>gb|AC116871.6| Mus musculus chromosome 19, clone RP24-417P12, complete sequence
          Length = 161959

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    tcaaaacatcttcagctcaca 63
             |||||||||||||||||||||
Sbjct: 21022 tcaaaacatcttcagctcaca 21042
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>gb|AC112153.4| Mus musculus BAC clone RP24-93G11 from chromosome 19, complete
            sequence
          Length = 180944

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   tcaaaacatcttcagctcaca 63
            |||||||||||||||||||||
Sbjct: 4745 tcaaaacatcttcagctcaca 4725
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>emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    agcaagaaaataaagtagtac 195
              |||||||||||||||||||||
Sbjct: 114411 agcaagaaaataaagtagtac 114431
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>emb|CR407586.6| Zebrafish DNA sequence from clone CH211-283G6 in linkage group 18,
              complete sequence
          Length = 134596

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     tcacaagccaattaagttaca 79
              |||||||||||||||||||||
Sbjct: 116258 tcacaagccaattaagttaca 116278
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>gb|AC160031.8| Mus musculus 10 BAC RP24-395H7 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 191028

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  aaacaatccccttaagattta 135
            |||||||||||||||||||||
Sbjct: 3247 aaacaatccccttaagattta 3227
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>dbj|BS000009.1| Pan troglodytes chromosome 22 clone:PTB-118J15, map 22, complete
              sequences
          Length = 199914

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    agcaagaaaataaagtagtac 195
              |||||||||||||||||||||
Sbjct: 119389 agcaagaaaataaagtagtac 119409
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>gb|AF130247.2|AF130247 Homo sapiens clone 31B5 chromosome 21 map 21q11.2, complete sequence
          Length = 88869

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 175  agcaagaaaataaagtagtac 195
            |||||||||||||||||||||
Sbjct: 9721 agcaagaaaataaagtagtac 9741
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>emb|BX908722.4| Zebrafish DNA sequence from clone CH211-165A16 in linkage group 18,
             complete sequence
          Length = 166917

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tcacaagccaattaagttaca 79
             |||||||||||||||||||||
Sbjct: 75730 tcacaagccaattaagttaca 75750
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>gb|AF130249.1|AF130249 Homo sapiens PAC 126N20 derived from chromosome 21p11.2, complete
             sequence, containing STCH and an unknown gene
          Length = 97083

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   agcaagaaaataaagtagtac 195
             |||||||||||||||||||||
Sbjct: 93268 agcaagaaaataaagtagtac 93288
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>dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-872D17, complete
             sequence
          Length = 190251

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 102   aagcataaaattcaaacaatcccct 126
             ||||||||||||||||||| |||||
Sbjct: 61849 aagcataaaattcaaacaagcccct 61873
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>gb|AC153512.2| Mus musculus 10 BAC RP23-18K14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209885

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   aaacaatccccttaagattta 135
             |||||||||||||||||||||
Sbjct: 78399 aaacaatccccttaagattta 78419
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>ref|XM_526797.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ33167
           (LOC471415), mRNA
          Length = 606

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 472 agttcaaaacatcttcagct 453
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>ref|XM_526796.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ33167
           (LOC471414), mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 766 agttcaaaacatcttcagct 747
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>gb|AC169505.1| Mus musculus BAC clone RP24-257J8 from chromosome 16, complete sequence
          Length = 138498

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aattaagttacaaaaactag 87
             ||||||||||||||||||||
Sbjct: 72804 aattaagttacaaaaactag 72785
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>gb|BC047467.1| Homo sapiens hypothetical protein FLJ33167, mRNA (cDNA clone
           IMAGE:5303049)
          Length = 2018

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 612 agttcaaaacatcttcagct 593
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>gb|BC064600.1| Homo sapiens hypothetical protein FLJ33167, mRNA (cDNA clone
           MGC:70479 IMAGE:5786393), complete cds
          Length = 2167

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 746 agttcaaaacatcttcagct 727
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>gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, complete sequence
          Length = 170831

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 36360 agcaagaaaataaagtagta 36341
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>gb|AC131702.3| Mus musculus BAC clone RP24-177J5 from chromosome 7, complete sequence
          Length = 154632

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    agctcacaagccaattaagt 75
             ||||||||||||||||||||
Sbjct: 62114 agctcacaagccaattaagt 62095
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>emb|AL731540.4| Human DNA sequence from clone RP11-367H5 on chromosome 10 Contains the
              H2AFY2 gene for H2A histone family (member Y2), the gene
              for apoptosis-inducing factor (AIF)-homologous
              mitochondrion-associated inducer of death (AMID), a novel
              gene (MGC34695), the SARA1 gene for SAR1a gene homolog 1
              (S. cerevisiae), the PP gene for pyrophosphatase
              (inorganic), a novel gene and five CpG islands, complete
              sequence
          Length = 186875

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    agcaagaaaataaagtagta 194
              ||||||||||||||||||||
Sbjct: 154853 agcaagaaaataaagtagta 154834
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>emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 106607

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aaccaaccaatgaacttctc 223
             ||||||||||||||||||||
Sbjct: 12138 aaccaaccaatgaacttctc 12157
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>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the 5'
              end of the RSU1 gene for Ras suppressor protein 1, the 3'
              end of the CUBN gene for cubilin (intrinsic
              factor-cobalamin receptor) and a CpG island, complete
              sequence
          Length = 184703

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    attttgaagcaagaaaataa 187
              ||||||||||||||||||||
Sbjct: 116594 attttgaagcaagaaaataa 116613
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>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete
              sequence
          Length = 185850

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    agcaagaaaataaagtagta 194
              ||||||||||||||||||||
Sbjct: 151735 agcaagaaaataaagtagta 151754
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>emb|AL136325.6| Human DNA sequence from clone RP5-983F16 on chromosome 1p21.3-22.2
             Contains a eukaryotic translation elongation factor 1
             alpha 1 (EEF1A1) pseudogene and a CpG island, complete
             sequence
          Length = 133052

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    agaaaggaagataagcataaaatt 113
             ||||||||||| ||||||||||||
Sbjct: 38942 agaaaggaagagaagcataaaatt 38965
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>emb|AL645790.8| Zebrafish DNA sequence from clone RP71-6L08 in linkage group 23
             Contains the 3' part of a novel gene similar to CELSR
             (cadherin, EGF LAG seven-pass G-type receptor), part of a
             novel gene and a CpG island, complete sequence
          Length = 165257

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   agaaccaaccaatgaacttc 221
             ||||||||||||||||||||
Sbjct: 24785 agaaccaaccaatgaacttc 24804
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>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09,
             complete sequence
          Length = 123375

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   acaaaattttgaagcaagaa 182
             ||||||||||||||||||||
Sbjct: 31202 acaaaattttgaagcaagaa 31183
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>emb|AL645596.7| Mouse DNA sequence from clone RP23-301E19 on chromosome 11 Contains the
             Ccl11 and Ccl12 genes for chemokine (C-C motif) ligand 11
             and 12, complete sequence
          Length = 63924

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 15580 agcaagaaaataaagtagta 15599
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>emb|BX647575.1|HSM807721 Homo sapiens mRNA; cDNA DKFZp313L1724 (from clone DKFZp313L1724)
          Length = 2190

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 793 agttcaaaacatcttcagct 774
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>emb|CR932804.1| Mus musculus chromosome 2, clone ResGen-475I1 strain 129/Sv, complete
             sequence
          Length = 127135

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tagtactacatgagaaccaa 209
             ||||||||||||||||||||
Sbjct: 28533 tagtactacatgagaaccaa 28552
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>emb|CR857205.1| Pongo pygmaeus mRNA; cDNA DKFZp468F1816 (from clone DKFZp468F1816)
          Length = 1800

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 403 agttcaaaacatcttcagct 384
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>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 26089 agcaagaaaataaagtagta 26108
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>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence
          Length = 175967

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 44694 agcaagaaaataaagtagta 44675
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>gb|BC099068.1| Xenopus laevis cDNA clone MGC:115737 IMAGE:6868864, complete cds
          Length = 2485

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 165  aaaattttgaagcaagaaaataaa 188
            ||||||||||||||| ||||||||
Sbjct: 2446 aaaattttgaagcaaaaaaataaa 2423
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>gb|AC079257.7| Homo sapiens BAC clone RP11-367I6 from 4, complete sequence
          Length = 133401

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    agttcaaaacatcttcagct 59
             ||||||||||||||||||||
Sbjct: 39776 agttcaaaacatcttcagct 39757
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>emb|CR606183.1| full-length cDNA clone CS0DI076YD16 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2099

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 751 agttcaaaacatcttcagct 732
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>dbj|AK057729.1| Homo sapiens cDNA FLJ33167 fis, clone UTERU2000569
          Length = 2078

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 688 agttcaaaacatcttcagct 669
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>gb|AC092962.4| Homo sapiens 3 BAC RP11-698E5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174698

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 98715 agcaagaaaataaagtagta 98696
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>gb|AC012294.15| Mus musculus chromosome 11, clone RP23-328G11, complete sequence
          Length = 222121

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 77243 agcaagaaaataaagtagta 77224
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>gb|AC107886.2| Homo sapiens chromosome 11, clone CTD-3064C13, complete sequence
          Length = 133892

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 72846 agcaagaaaataaagtagta 72827
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>gb|AC092393.3| Homo sapiens chromosome 1 clone RP4-736I12, complete sequence
          Length = 90526

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    agaaaggaagataagcataaaatt 113
             ||||||||||| ||||||||||||
Sbjct: 79288 agaaaggaagagaagcataaaatt 79311
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>gb|AC122427.6| Mus musculus BAC clone RP24-175C2 from chromosome 1, complete sequence
          Length = 180773

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   ataaaattcaaacaatccccttaa 129
             ||||||||||||||||||| ||||
Sbjct: 59911 ataaaattcaaacaatccctttaa 59934
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>emb|AL117151.1|CNS01DQF Botrytis cinerea strain T4 cDNA library
          Length = 117

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 aaatgttacaatcgaaaaaa 257
           ||||||||||||||||||||
Sbjct: 92  aaatgttacaatcgaaaaaa 73
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>emb|AL929034.17| Mouse DNA sequence from clone RP23-90F9 on chromosome 2, complete
             sequence
          Length = 161905

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tagtactacatgagaaccaa 209
             ||||||||||||||||||||
Sbjct: 73905 tagtactacatgagaaccaa 73924
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     acaaaattttgaagcaagaa 182
               ||||||||||||||||||||
Sbjct: 8417827 acaaaattttgaagcaagaa 8417808
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>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 168    attttgaagcaagaaaataaagta 191
              ||||| ||||||||||||||||||
Sbjct: 242564 attttaaagcaagaaaataaagta 242541
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>ref|NM_152683.1| Homo sapiens hypothetical protein FLJ33167 (FLJ33167), mRNA
          Length = 2078

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  agttcaaaacatcttcagct 59
           ||||||||||||||||||||
Sbjct: 688 agttcaaaacatcttcagct 669
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>gb|AC024267.18| Homo sapiens chromosome 17, clone RP11-20B24, complete sequence
          Length = 175020

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 169    ttttgaagcaagaaaataaagtag 192
              ||||||||| ||||||||||||||
Sbjct: 128206 ttttgaagccagaaaataaagtag 128183
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>dbj|AK120419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094A11, full
            insert sequence
          Length = 4818

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  acaaaattttgaagcaagaa 182
            ||||||||||||||||||||
Sbjct: 3495 acaaaattttgaagcaagaa 3476
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>dbj|AK120245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J21, full
            insert sequence
          Length = 5429

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  acaaaattttgaagcaagaa 182
            ||||||||||||||||||||
Sbjct: 4052 acaaaattttgaagcaagaa 4033
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>emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 map q21.2, complete
              sequence
          Length = 241304

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 168    attttgaagcaagaaaataaagta 191
              ||||| ||||||||||||||||||
Sbjct: 185333 attttaaagcaagaaaataaagta 185310
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>dbj|AP001038.2| Homo sapiens genomic DNA, chromosome 21, clone:P178O22, ERG-ETS2 region,
              complete sequence
          Length = 141885

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 168    attttgaagcaagaaaataaagta 191
              ||||| ||||||||||||||||||
Sbjct: 116978 attttaaagcaagaaaataaagta 116955
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>emb|AL928864.11| Zebrafish DNA sequence from clone CH211-10P21, complete sequence
          Length = 181508

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    aaaaacttgtggtgcatatg 272
              ||||||||||||||||||||
Sbjct: 143961 aaaaacttgtggtgcatatg 143980
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>gb|AC145946.3| Gallus gallus BAC clone CH261-23O21 from chromosome unknown, complete
              sequence
          Length = 248690

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ttttgaagcaagaaaataaa 188
              ||||||||||||||||||||
Sbjct: 182385 ttttgaagcaagaaaataaa 182404
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>emb|AL713839.1|CNS07YOT Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 149H13 of library Caltech CITB-BAC from chromosome
             11 of Mus musculus (mouse)
          Length = 240425

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agcaagaaaataaagtagta 194
             ||||||||||||||||||||
Sbjct: 97107 agcaagaaaataaagtagta 97126
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>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
              sequence
          Length = 224038

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    attttgaagcaagaaaataa 187
              ||||||||||||||||||||
Sbjct: 195444 attttgaagcaagaaaataa 195463
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>emb|AL607034.16| Mouse DNA sequence from clone RP23-303K9 on chromosome 11, complete
              sequence
          Length = 143148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    agcaagaaaataaagtagta 194
              ||||||||||||||||||||
Sbjct: 127569 agcaagaaaataaagtagta 127550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,932,286
Number of Sequences: 3902068
Number of extensions: 3932286
Number of successful extensions: 90558
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90433
Number of HSP's gapped (non-prelim): 125
length of query: 319
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 297
effective length of database: 17,147,199,772
effective search space: 5092718332284
effective search space used: 5092718332284
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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