ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468385.1| Oryza sativa (japonica cultivar-group), mRNA 90 5e-15
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
3dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
4dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
5dbj|AK099733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
6gb|U77637.1|OSU77637 Oryza sativa class III ADH enzyme (AdhIII) ... 90 5e-15
7emb|Y11029.1|ZMFDH Z.mays mRNA for glutathione-dependent formald... 50 0.004
8gb|AY111235.1| Zea mays CL1875_1 mRNA sequence 50 0.004
9gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 48 0.017
10gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 48 0.017
11gb|AE015451.1| Pseudomonas putida KT2440 complete genome 48 0.017
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
13dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
14dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
15gb|U48375.1|PBU48375 Pinus banksiana alcohol dehydrogenase (AdhC... 44 0.26
16gb|U48374.1|PBU48374 Pinus banksiana alcohol dehydrogenase (AdhC... 44 0.26
17gb|U48370.1|PBU48370 Pinus banksiana alcohol dehydrogenase (AdhC... 44 0.26
18gb|U48368.1|PBU48368 Pinus banksiana alcohol dehydrogenase (AdhC... 44 0.26
19gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 1.0
20ref|XM_505672.1| Yarrowia lipolytica CLIB122, YALI0F20636g predi... 42 1.0
21emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 1.0
22gb|BT016362.1| Zea mays clone Contig195 mRNA sequence 40 4.0
23gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 4.0
24ref|XM_950488.1| Encephalitozoon cuniculi GB-M1 alpha-actinin (E... 40 4.0
25gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein... 40 4.0
26emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 i... 40 4.0
27emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on ch... 40 4.0
28emb|BX927291.8| Zebrafish DNA sequence from clone CH211-261A10 i... 40 4.0
29emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 ... 40 4.0
30emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 ... 40 4.0
31emb|BX649305.9| Zebrafish DNA sequence from clone DKEY-66F12 in ... 40 4.0
32emb|BX323985.8| Zebrafish DNA sequence from clone CH211-194D1 in... 40 4.0
33emb|BX649487.7| Zebrafish DNA sequence from clone DKEY-148C4 in ... 40 4.0
34emb|BX640463.14| Zebrafish DNA sequence from clone DKEY-29P10 in... 40 4.0
35emb|BX547941.7| Zebrafish DNA sequence from clone RP71-1C23 in l... 40 4.0
36emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 i... 40 4.0
37emb|BX324175.6| Zebrafish DNA sequence from clone DKEY-237M7 in ... 40 4.0
38emb|BX324180.4| Zebrafish DNA sequence from clone CH211-134O13 i... 40 4.0
39emb|BX957258.12| Zebrafish DNA sequence from clone DKEY-285J17 i... 40 4.0
40emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 ... 40 4.0
41gb|U48376.1|PBU48376 Pinus banksiana alcohol dehydrogenase (AdhC... 40 4.0
42gb|U48371.1|PBU48371 Pinus banksiana alcohol dehydrogenase (AdhC... 40 4.0
43emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encepha... 40 4.0 
>ref|XM_468385.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1396

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                        
Query: 227  gccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgatgtcg 286
            ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 1217 gccagaacacaccgcaggcagccaccttcatgcagcaggtcaaacgccttgttgatgtca 1158

                             
Query: 287  gtaaggctcatgttgtg 303
            || ||| ||||| ||||
Sbjct: 1157 gtcaggttcatgctgtg 1141
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                            
Query: 227      gccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgatgtcg 286
                ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 34952338 gccagaacacaccgcaggcagccaccttcatgcagcaggtcaaacgccttgttgatgtca 34952279

                                 
Query: 287      gtaaggctcatgttgtg 303
                || ||| ||||| ||||
Sbjct: 34952278 gtcaggttcatgctgtg 34952262
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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643F09
          Length = 161001

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 227   gccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgatgtcg 286
             ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 12679 gccagaacacaccgcaggcagccaccttcatgcagcaggtcaaacgccttgttgatgtca 12620

                              
Query: 287   gtaaggctcatgttgtg 303
             || ||| ||||| ||||
Sbjct: 12619 gtcaggttcatgctgtg 12603
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>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_E04
          Length = 118192

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                          
Query: 227    gccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgatgtcg 286
              ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 111835 gccagaacacaccgcaggcagccaccttcatgcagcaggtcaaacgccttgttgatgtca 111776

                               
Query: 287    gtaaggctcatgttgtg 303
              || ||| ||||| ||||
Sbjct: 111775 gtcaggttcatgctgtg 111759
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>dbj|AK099733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089P19, full
            insert sequence
          Length = 1393

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                        
Query: 227  gccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgatgtcg 286
            ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 1214 gccagaacacaccgcaggcagccaccttcatgcagcaggtcaaacgccttgttgatgtca 1155

                             
Query: 287  gtaaggctcatgttgtg 303
            || ||| ||||| ||||
Sbjct: 1154 gtcaggttcatgctgtg 1138
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>gb|U77637.1|OSU77637 Oryza sativa class III ADH enzyme (AdhIII) gene, complete cds
          Length = 4027

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                        
Query: 227  gccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgatgtcg 286
            ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 3644 gccagaacacaccgcaggcagccaccttcatgcagcaggtcaaacgccttgttgatgtca 3585

                             
Query: 287  gtaaggctcatgttgtg 303
            || ||| ||||| ||||
Sbjct: 3584 gtcaggttcatgctgtg 3568
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>emb|Y11029.1|ZMFDH Z.mays mRNA for glutathione-dependent formaldehyde dehydrogenase
          Length = 1446

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  catcgccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgat 282
            |||||||||||| || ||||| ||||| ||||| ||||||||||  || || | ||||||
Sbjct: 1218 catcgccagcacacaacgcagacagccaccttcgtgcagcaggtggaaggcgtcgttgat 1159

                                 
Query: 283  gtcggtaaggctcatgttgtg 303
            ||| |  ||| ||||||||||
Sbjct: 1158 gtcagccaggttcatgttgtg 1138
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>gb|AY111235.1| Zea mays CL1875_1 mRNA sequence
          Length = 1582

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  catcgccagcacgcaccgcaggcagccgccttcatgcagcaggtcaaatgccttgttgat 282
            |||||||||||| || ||||| ||||| ||||| ||||||||||  || || | ||||||
Sbjct: 1218 catcgccagcacacaacgcagacagccaccttcgtgcagcaggtggaaggcgtcgttgat 1159

                                 
Query: 283  gtcggtaaggctcatgttgtg 303
            ||| |  ||| ||||||||||
Sbjct: 1158 gtcagccaggttcatgttgtg 1138
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 250     gccttcatgcagcaggtcaaatgccttgttgatgtc 285
               ||||||||||| ||| || |||||||||||||||||
Sbjct: 1721932 gccttcatgcatcagatcgaatgccttgttgatgtc 1721897
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 250     gccttcatgcagcaggtcaaatgccttgttgatgtc 285
               ||||||||||| |||||| || ||||||||||||||
Sbjct: 4367338 gccttcatgcatcaggtcgaacgccttgttgatgtc 4367373
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 250     gccttcatgcagcaggtcaaatgccttgttgatgtc 285
               ||||||||||| |||||| || ||||||||||||||
Sbjct: 1813603 gccttcatgcatcaggtcgaaggccttgttgatgtc 1813568
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 32       cccaaccaggcaaccatccaac 53
                ||||||||||||||||||||||
Sbjct: 21821589 cccaaccaggcaaccatccaac 21821568
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534A03
          Length = 153170

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 32     cccaaccaggcaaccatccaac 53
              ||||||||||||||||||||||
Sbjct: 138772 cccaaccaggcaaccatccaac 138751
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    cccaaccaggcaaccatccaac 53
             ||||||||||||||||||||||
Sbjct: 35265 cccaaccaggcaaccatccaac 35244
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>gb|U48375.1|PBU48375 Pinus banksiana alcohol dehydrogenase (AdhC5) gene, partial cds
          Length = 3059

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 266  tcaaatgccttgttgatgtcgg 287
            ||||||||||||||||||||||
Sbjct: 2878 tcaaatgccttgttgatgtcgg 2857
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>gb|U48374.1|PBU48374 Pinus banksiana alcohol dehydrogenase (AdhC3) gene, partial cds
          Length = 2930

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 266  tcaaatgccttgttgatgtcgg 287
            ||||||||||||||||||||||
Sbjct: 2767 tcaaatgccttgttgatgtcgg 2746
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>gb|U48370.1|PBU48370 Pinus banksiana alcohol dehydrogenase (AdhC5) mRNA, partial cds
          Length = 1367

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 266  tcaaatgccttgttgatgtcgg 287
            ||||||||||||||||||||||
Sbjct: 1074 tcaaatgccttgttgatgtcgg 1053
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>gb|U48368.1|PBU48368 Pinus banksiana alcohol dehydrogenase (AdhC3) mRNA, partial cds
          Length = 1322

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 266  tcaaatgccttgttgatgtcgg 287
            ||||||||||||||||||||||
Sbjct: 1074 tcaaatgccttgttgatgtcgg 1053
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 250     gccttcatgcagcaggtcaaatgccttgttgat 282
               ||||||||||| |||||| || |||||||||||
Sbjct: 1551554 gccttcatgcatcaggtcgaacgccttgttgat 1551522
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>ref|XM_505672.1| Yarrowia lipolytica CLIB122, YALI0F20636g predicted mRNA
          Length = 5538

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 171 aactgctcggcttcgaagcag 191
           |||||||||||||||||||||
Sbjct: 963 aactgctcggcttcgaagcag 943
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 171     aactgctcggcttcgaagcag 191
               |||||||||||||||||||||
Sbjct: 2751621 aactgctcggcttcgaagcag 2751641
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>gb|BT016362.1| Zea mays clone Contig195 mRNA sequence
          Length = 1480

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 223  catcgccagcacgcaccgcaggcagccgccttcatgcagcaggt 266
            |||||||||||| || ||||| ||||| ||||| || |||||||
Sbjct: 1226 catcgccagcacacaacgcagacagccaccttcgtggagcaggt 1183
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 250     gccttcatgcagcaggtcaaatgccttgttgatgtc 285
               |||||| |||| |||||| || ||||||||||||||
Sbjct: 1303301 gccttcgtgcatcaggtcgaaggccttgttgatgtc 1303266
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>ref|XM_950488.1| Encephalitozoon cuniculi GB-M1 alpha-actinin (ECU09_0290) partial
           mRNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 258 gcagcaggtcaaatgccttgttga 281
           ||||||| ||||||||||||||||
Sbjct: 892 gcagcagatcaaatgccttgttga 869
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>gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein), alpha-like 1
             (CTNNAL1) gene, complete cds
          Length = 74429

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 63772 tcaaatgccttgttgatgtc 63791
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>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7,
              complete sequence
          Length = 190528

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tcaaatgccttgttgatgtc 285
              ||||||||||||||||||||
Sbjct: 163653 tcaaatgccttgttgatgtc 163634
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>emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on chromosome 9q31.3-33.2
             Contains the 5' end of the IKBKAP gene encoding inhibitor
             of kappa light polypeptide gene enhancer in B-cells
             (kinase complex-associated protein (IKAP)), the C9orf6
             gene for chromosome 9 open reading frame 6, the 5' end of
             the C9orf5 gene for chromosome 9 open reading frame 5, the
             3' end of the CTNNAL1 gene encoding Catenin
             (cadherin-associated protein) alpha-like 1, and two CpG
             islands, complete sequence
          Length = 188134

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 47136 tcaaatgccttgttgatgtc 47117
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>emb|BX927291.8| Zebrafish DNA sequence from clone CH211-261A10 in linkage group 15,
             complete sequence
          Length = 154479

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 16832 tcaaatgccttgttgatgtc 16851
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>emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 in linkage group 24,
              complete sequence
          Length = 158981

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    ggtcaaatgccttgttgatg 283
              ||||||||||||||||||||
Sbjct: 138500 ggtcaaatgccttgttgatg 138519
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>emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 in linkage group 24,
             complete sequence
          Length = 152545

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ggtcaaatgccttgttgatg 283
             ||||||||||||||||||||
Sbjct: 54310 ggtcaaatgccttgttgatg 54291
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>emb|BX649305.9| Zebrafish DNA sequence from clone DKEY-66F12 in linkage group 6,
             complete sequence
          Length = 101851

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 79938 tcaaatgccttgttgatgtc 79919
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>emb|BX323985.8| Zebrafish DNA sequence from clone CH211-194D1 in linkage group 17,
             complete sequence
          Length = 198162

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 24617 tcaaatgccttgttgatgtc 24636
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>emb|BX649487.7| Zebrafish DNA sequence from clone DKEY-148C4 in linkage group 9, complete
              sequence
          Length = 201933

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tcaaatgccttgttgatgtc 285
              ||||||||||||||||||||
Sbjct: 124886 tcaaatgccttgttgatgtc 124867
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>emb|BX640463.14| Zebrafish DNA sequence from clone DKEY-29P10 in linkage group 18,
              complete sequence
          Length = 233058

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tcaaatgccttgttgatgtc 285
              ||||||||||||||||||||
Sbjct: 161036 tcaaatgccttgttgatgtc 161017
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>emb|BX547941.7| Zebrafish DNA sequence from clone RP71-1C23 in linkage group 5, complete
              sequence
          Length = 137259

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tcaaatgccttgttgatgtc 285
              ||||||||||||||||||||
Sbjct: 122451 tcaaatgccttgttgatgtc 122470
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>emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 in linkage group 20,
              complete sequence
          Length = 165089

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tcaaatgccttgttgatgtc 285
              ||||||||||||||||||||
Sbjct: 160399 tcaaatgccttgttgatgtc 160380
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>emb|BX324175.6| Zebrafish DNA sequence from clone DKEY-237M7 in linkage group 22,
              complete sequence
          Length = 222879

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tcaaatgccttgttgatgtc 285
              ||||||||||||||||||||
Sbjct: 179654 tcaaatgccttgttgatgtc 179635
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>emb|BX324180.4| Zebrafish DNA sequence from clone CH211-134O13 in linkage group 22,
             complete sequence
          Length = 136724

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 77599 tcaaatgccttgttgatgtc 77580
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>emb|BX957258.12| Zebrafish DNA sequence from clone DKEY-285J17 in linkage group 22,
             complete sequence
          Length = 169327

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tcaaatgccttgttgatgtc 285
             ||||||||||||||||||||
Sbjct: 86318 tcaaatgccttgttgatgtc 86299
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>emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 in linkage group 24,
              complete sequence
          Length = 147604

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    ggtcaaatgccttgttgatg 283
              ||||||||||||||||||||
Sbjct: 116121 ggtcaaatgccttgttgatg 116140
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>gb|U48376.1|PBU48376 Pinus banksiana alcohol dehydrogenase (AdhC6) gene, partial cds
          Length = 5808

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  tcaaatgccttgttgatgtc 285
            ||||||||||||||||||||
Sbjct: 5726 tcaaatgccttgttgatgtc 5707
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>gb|U48371.1|PBU48371 Pinus banksiana alcohol dehydrogenase (AdhC6) mRNA, partial cds
          Length = 1372

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  tcaaatgccttgttgatgtc 285
            ||||||||||||||||||||
Sbjct: 1074 tcaaatgccttgttgatgtc 1055
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>emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 251002

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 258   gcagcaggtcaaatgccttgttga 281
             ||||||| ||||||||||||||||
Sbjct: 40123 gcagcagatcaaatgccttgttga 40146


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,124,364
Number of Sequences: 3902068
Number of extensions: 2124364
Number of successful extensions: 53548
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53330
Number of HSP's gapped (non-prelim): 218
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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