Clone Name | rbart51f08 |
---|---|
Clone Library Name | barley_pub |
>I17RD_HUMAN (Q8NFM7) Interleukin-17 receptor D precursor (IL-17 receptor D)| (IL-17RD) (Interleukin-17D receptor) (IL-17D receptor) (IL17Rhom) (Interleukin-17 receptor-like protein) (Sef homolog) (hSef) Length = 739 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +2 Query: 86 ASIYKQLRQ*KGSSSKFSELHIQIANTCGAQGNTE*VE*LSGGITHMDRGTELSSGTTHM 265 ++I ++LRQ K SSS I + +G+ + LS MD +L S Sbjct: 455 SAIAEKLRQAKQSSSAALSKFIAVYFDYSCEGDVPGILDLSTKYRLMDNLPQLCSHLHSR 514 Query: 266 DHGTTNTEQHAR 301 DHG QH R Sbjct: 515 DHGLQEPGQHTR 526
>KRA34_SHEEP (P02445) Keratin, high sulfur matrix protein, IIIB4| Length = 98 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 19/89 (21%) Frame = -3 Query: 309 CLVRACCSVFVVP*SM---------CVVPLDSSVPRSIWVMPPDSYSTYSVLPC---APH 166 C R CCSV P + C V L S+ P ++W + P PC P Sbjct: 2 CCARLCCSVPTSPATTICSSDKFCRCGVCLPSTCPHTVWFLQPTCCCDNRPPPCHIPQPS 61 Query: 165 VLAICICNS-------ENLELLPFYCRSC 100 V + NS E++ L + SC Sbjct: 62 VPTCFLLNSSQPTPGLESINLTTYTQPSC 90
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +2 Query: 212 GITHMDRGTELSSGTTHMDHGTTNTEQHA 298 G TH+ TE S+GT+H TT T QH+ Sbjct: 2752 GTTHI---TEPSTGTSHTPAATTGTTQHS 2777 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +2 Query: 212 GITHMDRGTELSSGTTHMDHGTTNTEQHA 298 G TH+ TE S+GT+H TT T QH+ Sbjct: 2223 GTTHI---TEPSTGTSHTPAATTGTTQHS 2248
>ADEN_ADEO7 (Q83906) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa| protein) Length = 201 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -3 Query: 330 KKT*NAGCLVRACCSVFVVP*SMCVVPLDSSVPRSIWVMPPDSYSTYSVLPCAPHVL 160 + T + C C +F + C +V +S W+ + ST S++PC PH+L Sbjct: 109 RNTQSVQCTCAGSCGLFCIFFLYCFHFYKQNVFKS-WLFQKLNGSTPSLIPCEPHLL 164
>OR8G2_HUMAN (Q15614) Olfactory receptor 8G2 (Olfactory receptor TPCR120)| (Olfactory receptor OR11-297) Length = 310 Score = 27.7 bits (60), Expect = 7.1 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -2 Query: 313 WLSRACMLLGVCGSVIHVRSATRQFGSPIHMGN-ATRQLLNLLGVTLCSACISYLYMQL* 137 WL+ +LG+ GS IH R F ++ N L LLG++ S I+ L + + Sbjct: 143 WLTVGVYILGILGSTIHTSFMLRLFLCKTNVINHYFCDLFPLLGLSCSSTYINELLVLV- 201 Query: 136 KLGTATFLLPQLLV 95 L L+P L + Sbjct: 202 -LSAFNILMPALTI 214
>CCND3_MOUSE (P30282) G1/S-specific cyclin-D3| Length = 292 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -2 Query: 169 ACISYLYMQL*KLGTATFLLPQLLVDTCPVT----CVYARQMCFVW 44 +C+ QL LGT LL L +T P+T C+Y Q W Sbjct: 90 SCVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLCIYTDQAVAPW 135
>CCND3_RAT (P48961) G1/S-specific cyclin-D3| Length = 293 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -2 Query: 169 ACISYLYMQL*KLGTATFLLPQLLVDTCPVT----CVYARQMCFVW 44 +C+ QL LGT LL L +T P+T C+Y Q W Sbjct: 90 SCVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLCIYTDQAMAPW 135
>S12A1_RAT (P55016) Solute carrier family 12 member 1 (Bumetanide-sensitive| sodium-(potassium)-chloride cotransporter 2) (Kidney-specific Na-K-Cl symporter) Length = 1095 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 324 T*NAGCLVRACCSVFVVP*SMCVVPLDSSV-PRSIWVM 214 T N+G + CC VFV P +CV ++S + + W+M Sbjct: 701 TKNSGLCI--CCEVFVGPRKLCVKEMNSGMAKKQAWLM 736
>SYL_THETN (Q8RCT6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 819 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 114 YCRSCL*ILALSLVCMLGRCVSCGCSVRNENPAEWMF 4 +C SC +LA V + G+C CG V + +W F Sbjct: 159 WCPSCQTVLANEQV-IDGKCERCGTEVTKKELTQWFF 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,199,224 Number of Sequences: 219361 Number of extensions: 1257710 Number of successful extensions: 3123 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3044 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3122 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)