ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart51f05 |
|---|---|
| Clone Library Name | barley_pub |
>PIP12_ORYSA (Q7XSQ9) Probable aquaporin PIP1.2 (Plasma membrane intrinsic| protein 1.2) (OsPIP1.2) Length = 282 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAAIYHQVVIRAIPF Sbjct: 260 IGAALAAIYHQVVIRAIPF 278
>PIP2_PEA (P25794) Probable aquaporin PIP-type 7a (Turgor-responsive protein| 7a) (Turgor-responsive protein 31) Length = 289 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YHQVVIRAIPF Sbjct: 268 IGAALAALYHQVVIRAIPF 286
>PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) Length = 289 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/19 (89%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 +GAALAAIYHQV+IRAIPF Sbjct: 267 VGAALAAIYHQVIIRAIPF 285
>PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane intrinsic| protein 1d) (PIP1d) Length = 287 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/19 (89%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YHQ+VIRAIPF Sbjct: 265 IGAALAALYHQIVIRAIPF 283
>PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane intrinsic| protein 1.4) (Transmembrane protein C) (TMP-C) Length = 287 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/19 (89%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YHQ+VIRAIPF Sbjct: 265 IGAALAALYHQIVIRAIPF 283
>PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening-associated| membrane protein) (RAMP) Length = 286 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/19 (84%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAAIYHQ++IRA+PF Sbjct: 265 IGAALAAIYHQIIIRAMPF 283
>PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c)| (PIP1c) (Transmembrane protein B) (TMP-B) Length = 286 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/19 (89%), Positives = 19/19 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YHQ+VIRAIPF Sbjct: 264 IGAALAALYHQLVIRAIPF 282
>PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsic protein 1.3)| (OsPIP1.3) (Water channel protein RWC3) (RWC-3) Length = 288 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/19 (94%), Positives = 18/19 (94%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAAIYH VVIRAIPF Sbjct: 266 IGAALAAIYHVVVIRAIPF 284
>PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YH VVIRAIPF Sbjct: 264 IGAALAALYHVVVIRAIPF 282
>PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YH VVIRAIPF Sbjct: 264 IGAALAALYHVVVIRAIPF 282
>PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic protein 1b)| (PIP1b) (Transmembrane protein A) (TMP-A) (AthH2) Length = 286 Score = 36.2 bits (82), Expect = 0.020 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = -1 Query: 386 IGAALAAIYHQVVIRAIPF 330 IGAALAA+YH +VIRAIPF Sbjct: 264 IGAALAALYHVIVIRAIPF 282
>PIP24_ORYSA (Q8GRT8) Aquaporin PIP2.4 (Plasma membrane intrinsic protein 2.4)| (OsPIP2.4) Length = 286 Score = 30.8 bits (68), Expect = 0.82 Identities = 12/16 (75%), Positives = 16/16 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 IGAA+AA+YHQV++RA Sbjct: 259 IGAAIAALYHQVILRA 274
>PIP25_ORYSA (Q8GRI8) Aquaporin PIP2.5 (Plasma membrane intrinsic protein 2.5)| (OsPIP2.5) Length = 283 Score = 30.8 bits (68), Expect = 0.82 Identities = 12/16 (75%), Positives = 16/16 (100%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 IGAA+AA+YHQ+V+RA Sbjct: 256 IGAAIAALYHQIVLRA 271
>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor| Length = 2809 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 151 YSPEPRQRTCM*SHQCSVVV*YCSLLCKSSK 59 Y+P+ TC+ +CS V C+ LCK++K Sbjct: 2394 YTPDATATTCLDMDECSQVPKPCTFLCKNTK 2424
>UN13C_HUMAN (Q8NB66) Unc-13 homolog C (Munc13-3) (Fragment)| Length = 1190 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/41 (29%), Positives = 19/41 (46%) Frame = +3 Query: 135 LGSGEYRARARVAHQTWKTNWNSTVTRTMGREGRPHQKEIH 257 LG + + + TW +N T +G+E RP E+H Sbjct: 1070 LGDKKRKQGTKTKSNTWSPKYNETFQFILGKENRPGAYELH 1110
>PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7.11.1)| Length = 1142 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 152 QSKSKSSTSNLEDKLEFHGNTDDGK 226 Q K+ + TSNL D +EF+GN D K Sbjct: 1022 QKKATTETSNLTDIVEFNGNNDHRK 1046
>NUCC_PSINU (Q8WHX3) NAD(P)H-quinone oxidoreductase chain H, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) Length = 393 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = +3 Query: 162 ARVAHQTWKTNWNSTVTRTMGREGRPHQKEIHSEHAV---CSSGWDGIFLCSSSLGLGLE 332 AR HQ+ WN + MG++ P K + EH V G GIFL + Sbjct: 292 ARRLHQSQNLEWNDFDYQFMGKKSSPTFKLLKQEHYVRIEAPKGELGIFLIGNDSVFPWR 351 Query: 333 W 335 W Sbjct: 352 W 352
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Frame = -3 Query: 330 QDQVLSCCYKERCHPNPKSKLRVLSEFLSDGGGP----LFPSSVLPWNSNLSSKFDVXXX 163 Q+ S + +R P+P +++RVL F S GG P +F + + W S+ D Sbjct: 2168 QNAADSMLFVQRLTPHPDARIRVLPAF-SAGGPPTRGLMFGTRLADWRRGKLSETDPLAP 2226 Query: 162 XXLCIHLNPDRGLVCNLIS-AQLLCSTA 82 L +RG +S AQ L + + Sbjct: 2227 WRSVPELGTERGAALGKLSPAQALAAVS 2254
>UN13C_RAT (Q62770) Unc-13 homolog C (Munc13-3)| Length = 2204 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/41 (29%), Positives = 18/41 (43%) Frame = +3 Query: 135 LGSGEYRARARVAHQTWKTNWNSTVTRTMGREGRPHQKEIH 257 LG + + + TW +N T +G E RP E+H Sbjct: 2084 LGDKKRKQGTKTKSNTWSPKYNETFQFILGNENRPGAYELH 2124
>EGFL8_HUMAN (Q99944) EGF-like domain-containing protein 8 precursor (Epidermal| growth factor-like protein 8) (Multiple EGF-like domain protein 8) (Vascular endothelial-statin 2) (VE-statin-2) Length = 293 Score = 28.9 bits (63), Expect = 3.1 Identities = 25/79 (31%), Positives = 34/79 (43%) Frame = +3 Query: 51 ETTLLDLHNNEQYYTTTEH**DYIQVLCLGSGEYRARARVAHQTWKTNWNSTVTRTMGRE 230 +T ++ LH NE Y Y L L +G R T++T + R M RE Sbjct: 41 QTLVVPLHYNESYSQPV-----YKPYLTLCAG------RRICSTYRTMY-----RVMWRE 84 Query: 231 GRPHQKEIHSEHAVCSSGW 287 R +E+ HAVC GW Sbjct: 85 VR---REVQQTHAVCCQGW 100
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = -2 Query: 379 PRWPPSTTRWSSERSH------SRPSPKLLLQRKMPSQPEEQTACSE 257 PR PP ER+H SRPSP+ L + +PS PE A S+ Sbjct: 660 PRPPPR----QQERAHLESLVASRPSPQPLAETPIPSLPEFPRAASQ 702
>UNG_BIFLO (Q8G3E9) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 213 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -3 Query: 318 LSCCYKERCHPNPKSKLRVLSEFLSDGGGPLFPSSVL-PW 202 LS C HP PKS + + E + D G P+ + L PW Sbjct: 62 LSFCVAPNVHPLPKSLVNIYKELVDDLGVPMPTNGDLTPW 101
>PIP22_ARATH (P43287) Aquaporin PIP2.2 (Plasma membrane intrinsic protein 2b)| (PIP2b) (TMP2b) Length = 285 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 IGAA+AA YHQ V+RA Sbjct: 255 IGAAIAAFYHQFVLRA 270
>RNT_XYLFT (Q87C86) Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)| Length = 211 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/62 (24%), Positives = 26/62 (41%) Frame = +3 Query: 198 NSTVTRTMGREGRPHQKEIHSEHAVCSSGWDGIFLCSSSLGLGLEWDRSDDHLVVDGGQR 377 N+ VTRT + HQ + + + L + GL+W+ +D H V ++ Sbjct: 134 NAAVTRTAYKRNPFHQFSVFDTVTLAGMAYGQTVLARAVQAAGLDWNAADAHSAVYDAEK 193 Query: 378 GA 383 A Sbjct: 194 TA 195
>RNT_XYLFA (Q9PBJ8) Ribonuclease T (EC 3.1.13.-) (Exoribonuclease T) (RNase T)| Length = 211 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/62 (24%), Positives = 26/62 (41%) Frame = +3 Query: 198 NSTVTRTMGREGRPHQKEIHSEHAVCSSGWDGIFLCSSSLGLGLEWDRSDDHLVVDGGQR 377 N+ VTRT + HQ + + + L + GL+W+ +D H V ++ Sbjct: 134 NAAVTRTAYKRNPFHQFSVFDTVTLAGMAYGQTVLARAVQAAGLDWNAADAHSAVYDAEK 193 Query: 378 GA 383 A Sbjct: 194 TA 195
>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)| (PIP2a) Length = 287 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 IGAA+AA YHQ V+RA Sbjct: 257 IGAAIAAFYHQFVLRA 272
>VE2_PAPVE (P11329) Probable regulatory protein E2| Length = 415 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +3 Query: 171 AHQTWKTNWNSTVTRTMGREGRPHQKEIHSEHAVCSSGWDGIFLCS 308 +++TW T W++ R EG E AVC++ GI+ C+ Sbjct: 128 SNKTWYTAWSTVYVRGTEEEG--------WETAVCAADGQGIYYCA 165
>PIP22_ORYSA (Q6K215) Probable aquaporin PIP2.2 (Plasma membrane intrinsic| protein 2.2) (OsPIP2.2) Length = 288 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 IGAA+AA YHQ V+RA Sbjct: 261 IGAAIAAAYHQYVLRA 276
>CRIP3_HUMAN (Q6Q6R5) Cysteine-rich protein 3 (CRP3) (Chromosome 6 LIM-only| protein) (h6LIMo) Length = 217 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/40 (25%), Positives = 18/40 (45%) Frame = +3 Query: 222 GREGRPHQKEIHSEHAVCSSGWDGIFLCSSSLGLGLEWDR 341 G++ PH K E ++C + ++ + LG W R Sbjct: 107 GKKSPPHMKTFTGETSLCPGCGEPVYFAEKVMSLGRNWHR 146
>PIP26_ARATH (Q9ZV07) Probable aquaporin PIP2.6 (Plasma membrane intrinsic| protein 2e) (PIP2e) Length = 289 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 +GAA+AA YHQ V+RA Sbjct: 256 VGAAIAAFYHQFVLRA 271
>PIP23_ORYSA (Q7XUA6) Probable aquaporin PIP2.3 (Plasma membrane intrinsic| protein 2.3) (OsPIP2.3) Length = 290 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 IGAA+AA YHQ V+RA Sbjct: 262 IGAAIAAAYHQYVLRA 277
>PIP21_ORYSA (Q8H5N9) Probable aquaporin PIP2.1 (Plasma membrane intrinsic| protein 2a) (PIP2a) (OsPIP2.1) Length = 290 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = -1 Query: 386 IGAALAAIYHQVVIRA 339 +GAA+AA YHQ ++RA Sbjct: 262 VGAAIAAFYHQYILRA 277
>CRIM1_HUMAN (Q9NZV1) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| (Cysteine-rich repeat-containing protein S52) Length = 1036 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 120 CNLISAQLLCSTARCCANP 64 CN+I+ + C+T R C+NP Sbjct: 133 CNIINGKCECNTIRTCSNP 151
>Y1931_VIBCH (Q9KQR7) UPF0061 protein VC1931| Length = 489 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 Query: 165 RVAHQTWKTNWNSTVTRTMGREGRP 239 R A +TW T + R +G+EGRP Sbjct: 389 REAAKTWLTRYLERAARELGQEGRP 413
>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein| 1) Length = 614 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 370 PPSTTRWSSERSHSRPSPKLLL 305 PP+ + WS E H P P+ LL Sbjct: 202 PPAPSVWSQELGHGEPQPQSLL 223
>NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 188 Score = 27.3 bits (59), Expect = 9.1 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +3 Query: 330 EWDRSDDHLVVD 365 +WDR DDH+VVD Sbjct: 55 DWDRGDDHVVVD 66
>K0256_HUMAN (Q93073) Protein KIAA0256| Length = 1101 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +3 Query: 162 ARVAHQTWKTNWNSTVTRTMGREGRPHQKEIHSEHA 269 + V + ++TNW + V + G E ++KE+ +H+ Sbjct: 867 SEVNEKEYETNWRNMVETSDGLEASENEKEVSCKHS 902
>PMIP_RAT (Q01992) Mitochondrial intermediate peptidase, mitochondrial| precursor (EC 3.4.24.59) (MIP) Length = 710 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 Query: 378 RAGRHLPPGGHQSDPIQDQVLSCCYKERCHPNPKSKLRVLSEFLS 244 R GRHL G ++ D V YK +PN +L+ L E LS Sbjct: 242 RDGRHLVIDGLHAEASDDLVREAAYKIFLYPN-ADQLKCLEELLS 285
>RAE1_SCHPO (P41838) Poly(A)+ RNA export protein| Length = 352 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Frame = -3 Query: 138 PDRGLVCNLISAQLLCSTAR---CCAN---PAKLFQVVPSSIRFQPRLLSC 4 P+R + + L +TA C N P K+F++ S ++FQ R L+C Sbjct: 159 PERVYAMDCVHPLLTVATAERNICVINLSEPTKIFKLAMSPLKFQTRSLAC 209
>HEMH_WIGBR (Q8D226) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 321 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -3 Query: 291 HPNPKSKLRVLSEFLSD 241 HPN KS + LSEFLSD Sbjct: 17 HPNKKSVKKYLSEFLSD 33 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,626,996 Number of Sequences: 219361 Number of extensions: 1178161 Number of successful extensions: 3412 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3312 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3410 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
