>gb|AY104397.1| Zea mays PCO152838 mRNA sequence
          Length = 653

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 237 cctctcgctcacggttccactgctcaatcttggccctgcgctcctcgctg 286
           ||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 215 cctctcgttcacggttccactgctcaatcttggcccttcgctcctcgctg 166

>ref|NM_191929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2106

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 245 tcacggttccactgctcaatcttggccctgcgctcctcgctgttctccct 294
           ||||| |||||||| || |||||||||||||||||||||||| |||||||
Sbjct: 748 tcacgattccactgttcgatcttggccctgcgctcctcgctgctctccct 699

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 245      tcacggttccactgctcaatcttggccctgcgctcctcgctgttctccct 294
                ||||| |||||||| || |||||||||||||||||||||||| |||||||
Sbjct: 27310836 tcacgattccactgttcgatcttggccctgcgctcctcgctgctctccct 27310885

>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0063G05
          Length = 182681

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 245   tcacggttccactgctcaatcttggccctgcgctcctcgctgttctccct 294
             ||||| |||||||| || |||||||||||||||||||||||| |||||||
Sbjct: 91353 tcacgattccactgttcgatcttggccctgcgctcctcgctgctctccct 91402

>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 236   tcctctcgctcacggttccactgctcaatcttggccctgcgctcctcgctg 286
             ||||| || |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 92689 tcctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctg 92639

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 236      tcctctcgctcacggttccactgctcaatcttggccctgcgctcctcgctg 286
                ||||| || |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 27862272 tcctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctg 27862222

>dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A01, full
            insert sequence
          Length = 1287

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 236  tcctctcgctcacggttccactgctcaatcttggccctgcgctcctcgctg 286
            ||||| || |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 1036 tcctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctg 986

>dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B11, full
            insert sequence
          Length = 1309

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 236  tcctctcgctcacggttccactgctcaatcttggccctgcgctcctcgctg 286
            ||||| || |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 1047 tcctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctg 997

>emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35b
          Length = 1289

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 245  tcacggttccactgctcaatcttggccctgcgctcctcgctg 286
            |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 1031 tcacggttccactgttcaatcttcgccctgcgttcctcgctg 990

>gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds
          Length = 1199

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 245 tcacggttccactgctcaatcttggccctgcgctcctcgctg 286
           ||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 860 tcacggttccactgctcaatcttcgccctcctctcctcgctg 819

>emb|Z98269.1|DMC87B1 Drosophila melanogaster cosmid clone 87B1
          Length = 40070

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   ataatgaaatggtaaataacg 201
             |||||||||||||||||||||
Sbjct: 34840 ataatgaaatggtaaataacg 34820

>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177724

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    ataatgaaatggtaaataacg 201
              |||||||||||||||||||||
Sbjct: 131632 ataatgaaatggtaaataacg 131612

>gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 173810

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   acagcaaaccaacagactcaa 156
             |||||||||||||||||||||
Sbjct: 19936 acagcaaaccaacagactcaa 19916

>ref|XM_393571.2| PREDICTED: Apis mellifera similar to BAI1-associated protein 1
           (BAP-1) (Membrane associated guanylate kinase
           inverted-1) (MAGI-1) (LOC410083), mRNA
          Length = 2779

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 acacataatgaaatggtaaat 197
           |||||||||||||||||||||
Sbjct: 724 acacataatgaaatggtaaat 744

>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete
             sequence
          Length = 292830

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   ataatgaaatggtaaataacg 201
             |||||||||||||||||||||
Sbjct: 91311 ataatgaaatggtaaataacg 91291

>emb|AL928792.9| Mouse DNA sequence from clone RP23-88O15 on chromosome 2, complete
              sequence
          Length = 257463

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    actcaaaacacaggagcaaac 171
              |||||||||||||||||||||
Sbjct: 225586 actcaaaacacaggagcaaac 225566

>gb|AY831449.1| Monocercomonoides sp. PA clone XY cytosolic heat shock protein
            70-like protein mRNA, complete cds
          Length = 2259

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 179  acataatgaaatggtaaataa 199
            |||||||||||||||||||||
Sbjct: 2177 acataatgaaatggtaaataa 2157

>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   tcacggttccactgctcaat 264
             ||||||||||||||||||||
Sbjct: 53512 tcacggttccactgctcaat 53531

>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence
          Length = 161996

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   cacataatgaaatggtaaat 197
             ||||||||||||||||||||
Sbjct: 17631 cacataatgaaatggtaaat 17650

>gb|AY427784.2| Danio rerio fibulin-4 (fbln4) gene, complete cds
          Length = 25830

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tcaaaacacaggagcaaact 172
             ||||||||||||||||||||
Sbjct: 18912 tcaaaacacaggagcaaact 18893

>emb|AL160176.3| Human DNA sequence from clone RP4-579F20 on chromosome 20 Contains the
             HMG1L1 gene for high-mobility group nonhistone chromosomal
             protein 1-like 1 and the 3' end of the CTCFL gene for
             CCCTC-binding factor (zinc finger protein)-like, complete
             sequence
          Length = 56912

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   cggggggctccttccacgcc 317
             ||||||||||||||||||||
Sbjct: 13677 cggggggctccttccacgcc 13658

>emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35a
          Length = 1277

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  tcacggttccactgctcaat 264
            ||||||||||||||||||||
Sbjct: 1062 tcacggttccactgctcaat 1043

>gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, region 96E-96F, BAC clone
             BACR03O03, complete sequence
          Length = 132168

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   cacataatgaaatggtaaat 197
             ||||||||||||||||||||
Sbjct: 27117 cacataatgaaatggtaaat 27098

>dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G09, full
            insert sequence
          Length = 1499

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  tcacggttccactgctcaat 264
            ||||||||||||||||||||
Sbjct: 1283 tcacggttccactgctcaat 1264

>dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E06, full
            insert sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  tcacggttccactgctcaat 264
            ||||||||||||||||||||
Sbjct: 1073 tcacggttccactgctcaat 1054

>emb|CR388166.7| Zebrafish DNA sequence from clone DKEY-17E16 in linkage group 21,
             complete sequence
          Length = 220882

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tcaaaacacaggagcaaact 172
             ||||||||||||||||||||
Sbjct: 65176 tcaaaacacaggagcaaact 65195

>gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90 of 118 of the
             complete sequence
          Length = 188285

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   cacataatgaaatggtaaat 197
             ||||||||||||||||||||
Sbjct: 37631 cacataatgaaatggtaaat 37612


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,319,656
Number of Sequences: 3902068
Number of extensions: 2319656
Number of successful extensions: 35177
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35132
Number of HSP's gapped (non-prelim): 45
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)