ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predic... 141 2e-30
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
3dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
4dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
5tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 141 2e-30
6emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 141 2e-30
7emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 133 4e-28
8emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 133 4e-28
9gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 50 0.005
10ref|NM_187573.1| Oryza sativa (japonica cultivar-group), predic... 44 0.32
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.32
12gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
14dbj|AK120047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
15dbj|AK064633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
16tpe|BN000563.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.32
17ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predic... 40 4.9
18ref|XM_469777.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
19gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.9
20gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom... 40 4.9
21gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, comple... 40 4.9
22emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on ch... 40 4.9
23gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ... 40 4.9
24gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 4.9
25emb|CR627148.1| Homo sapiens mRNA; cDNA DKFZp779F2127 (from clon... 40 4.9
26gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence 40 4.9
27gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence 40 4.9
28dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.9
29dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
30dbj|AK099287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
31dbj|AK069033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
32dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
33tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 4.9
34gb|BC039680.1| Homo sapiens, clone IMAGE:5213378, mRNA 40 4.9
35emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chrom... 40 4.9

>ref|XM_474445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1047

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
           |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 988 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 929

                                                                       
Query: 233 cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
           | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 928 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 869

                                                                       
Query: 293 cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
           | |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 868 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaggtgaacaccc 809

              
Query: 353 cct 355
           |||
Sbjct: 808 cct 806



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Plus

                                                                            
Query: 173      gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
                |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 35227640 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 35227699

                                                                            
Query: 233      cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
                | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 35227700 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 35227759

                                                                            
Query: 293      cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
                | |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 35227760 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaggtgaacaccc 35227819

                   
Query: 353      cct 355
                |||
Sbjct: 35227820 cct 35227822



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 336      gtcggaggtgaacaccccct 355
                ||||||||||||||||||||
Sbjct: 35242684 gtcggaggtgaacaccccct 35242703



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>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full
            insert sequence
          Length = 1413

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                        
Query: 173  gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
            |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 1091 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 1032

                                                                        
Query: 233  cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
            | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 1031 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 972

                                                                        
Query: 293  cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
            | |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 971  cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaggtgaacaccc 912

               
Query: 353  cct 355
            |||
Sbjct: 911  cct 909



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>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full
            insert sequence
          Length = 3800

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                        
Query: 173  gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
            |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 3579 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 3520

                                                                        
Query: 233  cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
            | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 3519 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 3460

                                                                        
Query: 293  cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
            | |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 3459 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaggtgaacaccc 3400

               
Query: 353  cct 355
            |||
Sbjct: 3399 cct 3397



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>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for
            class III peroxidase 60 precursor, exons 1-3
          Length = 1221

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                        
Query: 173  gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
            |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 1162 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 1103

                                                                        
Query: 233  cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
            | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 1102 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 1043

                                                                        
Query: 293  cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
            | |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 1042 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaggtgaacaccc 983

               
Query: 353  cct 355
            |||
Sbjct: 982  cct 980



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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Plus

                                                                         
Query: 173   gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
             |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 23485 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 23544

                                                                         
Query: 233   cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
             | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 23545 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 23604

                                                                         
Query: 293   cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
             | |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 23605 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaggtgaacaccc 23664

                
Query: 353   cct 355
             |||
Sbjct: 23665 cct 23667



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   gtcggaggtgaacaccccct 355
             ||||||||||||||||||||
Sbjct: 38529 gtcggaggtgaacaccccct 38548



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>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score =  133 bits (67), Expect = 4e-28
 Identities = 154/183 (84%)
 Strand = Plus / Minus

                                                                         
Query: 173   gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
             |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 85832 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 85773

                                                                         
Query: 233   cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
             | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 85772 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 85713

                                                                         
Query: 293   cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
             | |||||||||||   ||||||||||||| ||||||||  ||||||||| ||||||||||
Sbjct: 85712 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaagtgaacaccc 85653

                
Query: 353   cct 355
             |||
Sbjct: 85652 cct 85650



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   gtcggaggtgaacaccccct 355
             ||||||||||||||||||||
Sbjct: 82416 gtcggaggtgaacaccccct 82397



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   gtcggaggtgaacaccccct 355
             ||||||||||||||||||||
Sbjct: 75611 gtcggaggtgaacaccccct 75592



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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score =  133 bits (67), Expect = 4e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                         
Query: 173   gcacgaagcaactgttgcgacggatctcgccgacgtttccttggggcccctggaggttcc 232
             |||||||||| |||||||| ||||||||||||||||| |||   || |||||||| |  |
Sbjct: 71215 gcacgaagcagctgttgcggcggatctcgccgacgttccctgaaggaccctggagctgtc 71274

                                                                         
Query: 233   cgagcttggtcatggaggcagcaaactggccgaagaaccaccagtggttcccggcgaagc 292
             | |||||   |||||||    | ||||||||| |||||||||||||||| ||||||||||
Sbjct: 71275 ccagcttcaccatggagctgccgaactggccgtagaaccaccagtggttgccggcgaagc 71334

                                                                         
Query: 293   cgttgaccacccattcggtgcgccagtcggcggtgagcttctggtcggaggtgaacaccc 352
             | |||||||||||   ||||||||||||| ||||||||  ||||||||| ||||||||||
Sbjct: 71335 cattgaccacccagctggtgcgccagtcgccggtgagcccctggtcggaagtgaacaccc 71394

                
Query: 353   cct 355
             |||
Sbjct: 71395 cct 71397



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   gtcggaggtgaacaccccct 355
             ||||||||||||||||||||
Sbjct: 81436 gtcggaggtgaacaccccct 81455



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   gtcggaggtgaacaccccct 355
             ||||||||||||||||||||
Sbjct: 74631 gtcggaggtgaacaccccct 74650



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 307     tcggtgcgccagtcggcggtgagct 331
               |||||||||||||||||||||||||
Sbjct: 3987749 tcggtgcgccagtcggcggtgagct 3987773



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>ref|NM_187573.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 969

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 318 gtcggcggtgagcttctggtcggagg 343
           ||||||||||||| ||||||||||||
Sbjct: 819 gtcggcggtgagcgtctggtcggagg 794



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 318     gtcggcggtgagcttctggtcggagg 343
               ||||||||||||| ||||||||||||
Sbjct: 1158458 gtcggcggtgagcgtctggtcggagg 1158483



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 244      atggaggcagcaaactggcc 263
                ||||||||||||||||||||
Sbjct: 30691785 atggaggcagcaaactggcc 30691766



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>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08,
             complete sequence
          Length = 100986

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 318   gtcggcggtgagcttctggtcggagg 343
             ||||||||||||| ||||||||||||
Sbjct: 62162 gtcggcggtgagcgtctggtcggagg 62187



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 318     gtcggcggtgagcttctggtcggagg 343
               ||||||||||||| ||||||||||||
Sbjct: 1158456 gtcggcggtgagcgtctggtcggagg 1158481



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 244      atggaggcagcaaactggcc 263
                ||||||||||||||||||||
Sbjct: 30783207 atggaggcagcaaactggcc 30783188



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>dbj|AK120047.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H03, full
           insert sequence
          Length = 520

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 318 gtcggcggtgagcttctggtcggagg 343
           ||||||||||||| ||||||||||||
Sbjct: 229 gtcggcggtgagcgtctggtcggagg 204



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>dbj|AK064633.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H03, full
           insert sequence
          Length = 1164

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 318 gtcggcggtgagcttctggtcggagg 343
           ||||||||||||| ||||||||||||
Sbjct: 873 gtcggcggtgagcgtctggtcggagg 848



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>tpe|BN000563.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx34 gene for
            class III peroxidase 34 precursor, exons 1-4
          Length = 1461

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 318  gtcggcggtgagcttctggtcggagg 343
            ||||||||||||| ||||||||||||
Sbjct: 1311 gtcggcggtgagcgtctggtcggagg 1286



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>ref|XM_474448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 gtcggaggtgaacaccccct 355
           ||||||||||||||||||||
Sbjct: 807 gtcggaggtgaacaccccct 788



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>ref|XM_469777.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 atggaggcagcaaactggcc 263
           ||||||||||||||||||||
Sbjct: 651 atggaggcagcaaactggcc 632



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>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
              OSJNBa0032E21, complete sequence
          Length = 137580

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    atggaggcagcaaactggcc 263
              ||||||||||||||||||||
Sbjct: 112000 atggaggcagcaaactggcc 112019



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>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   atggaggcagcaaactggcc 263
             ||||||||||||||||||||
Sbjct: 70607 atggaggcagcaaactggcc 70626



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>gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, complete sequence
          Length = 209762

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 5      actattgtaaccaattaatataaa 28
              |||||||||||||||| |||||||
Sbjct: 123547 actattgtaaccaatttatataaa 123570



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>emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on chromosome 9 Contains
             three novel genes, a novel pseudogene, two novel
             pseudogenes (LOC339742), a tumor suppressor deleted in
             oral cancer-related 1 (DOC-1R) pseudogene, a pseudogene
             similar to part of prostaglandin E receptor 4 (subtype
             EP4) (PTGER4), a pseudogene similar to part of myosin VA
             (heavy polypeptide 12, myoxin) (MYO5A), a pseudogene
             similar to part of G protein-coupled receptor 116
             (GPR116), a pseudogene similar to part of fibroblast
             growth factor 7 (keratinocyte growth factor) (FGF7) and
             five CpG islands, complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ctattgtaaccaattaatat 25
             ||||||||||||||||||||
Sbjct: 11820 ctattgtaaccaattaatat 11839



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>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
           sequence
          Length = 128294

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 atggaggcagcaaactggcc 263
           ||||||||||||||||||||
Sbjct: 486 atggaggcagcaaactggcc 467



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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      ttgtaaccaattaatataaa 28
              ||||||||||||||||||||
Sbjct: 272249 ttgtaaccaattaatataaa 272230



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>emb|CR627148.1| Homo sapiens mRNA; cDNA DKFZp779F2127 (from clone DKFZp779F2127)
          Length = 2894

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    ctattgtaaccaattaatat 25
            ||||||||||||||||||||
Sbjct: 1109 ctattgtaaccaattaatat 1128



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>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence
          Length = 157430

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 239    tggtcatggaggcagcaaactggc 262
              |||||| |||||||||||||||||
Sbjct: 142122 tggtcagggaggcagcaaactggc 142145



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>gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence
          Length = 153498

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 239   tggtcatggaggcagcaaactggc 262
             |||||| |||||||||||||||||
Sbjct: 93872 tggtcagggaggcagcaaactggc 93849



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 335     ggtcggaggtgaacacccccttgc 358
               ||||||||||||||||| ||||||
Sbjct: 3125766 ggtcggaggtgaacaccaccttgc 3125789



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>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full
           insert sequence
          Length = 1299

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 gtcggaggtgaacaccccct 355
           ||||||||||||||||||||
Sbjct: 896 gtcggaggtgaacaccccct 877



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>dbj|AK099287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H11, full
           insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 atggaggcagcaaactggcc 263
           ||||||||||||||||||||
Sbjct: 623 atggaggcagcaaactggcc 604



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>dbj|AK069033.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G24, full
           insert sequence
          Length = 877

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 atggaggcagcaaactggcc 263
           ||||||||||||||||||||
Sbjct: 626 atggaggcagcaaactggcc 607



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>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full
           insert sequence
          Length = 1333

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 gtcggaggtgaacaccccct 355
           ||||||||||||||||||||
Sbjct: 897 gtcggaggtgaacaccccct 878



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>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for
           class III peroxidase 61, exons 1-2
          Length = 1178

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 gtcggaggtgaacaccccct 355
           ||||||||||||||||||||
Sbjct: 962 gtcggaggtgaacaccccct 943



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>gb|BC039680.1| Homo sapiens, clone IMAGE:5213378, mRNA
          Length = 1312

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    ctattgtaaccaattaatat 25
            ||||||||||||||||||||
Sbjct: 1082 ctattgtaaccaattaatat 1101



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>emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chromosome 2, complete
             sequence
          Length = 164834

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     actattgtaaccaattaatataaa 28
             |||||||||||||||| |||||||
Sbjct: 27555 actattgtaaccaatttatataaa 27578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,490,196
Number of Sequences: 3902068
Number of extensions: 2490196
Number of successful extensions: 36907
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36694
Number of HSP's gapped (non-prelim): 213
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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