ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genom... 139 6e-30
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 6e-30
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-30
4dbj|AK073307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 6e-30
5dbj|AK063917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 6e-30
6gb|AY108935.1| Zea mays PCO091688 mRNA sequence 127 2e-26
7ref|XM_480999.1| Oryza sativa (japonica cultivar-group), mRNA 90 5e-15
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
9dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.25
11dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.25
12dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.25
13dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.25
14gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 42 1.00
15gb|AC026398.5| Homo sapiens chromosome 5 clone CTB-127M13, compl... 42 1.00
16gb|AF038840.1|AF038840 Dendrobium crumenatum 1-aminocyclopropane... 42 1.00
17gb|AY598795.1| Laelia anceps 1-aminocyclopropane-1-carboxylate o... 40 3.9
18gb|AY598794.1| Cattleya intermedia 1-aminocyclopropane-1-carboxy... 40 3.9
19gb|AY598793.1| Cattleya bicolor 1-aminocyclopropane-1-carboxylat... 40 3.9
20emb|AL589703.6| Human DNA sequence from clone RP11-127L21 on chr... 40 3.9
21gb|AC026226.9| Homo sapiens chromosome 10 clone RP11-81B10, comp... 40 3.9
22gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 3.9
23gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map... 40 3.9
24gb|AC016343.5| Homo sapiens chromosome 15, clone RP11-142M4, com... 40 3.9
25gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 3.9
26dbj|AK045273.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 3.9
27dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
28gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana... 40 3.9
29gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, com... 40 3.9
30gb|AC012190.3|T22I11 Arabidopsis thaliana chromosome 1 BAC T22I1... 40 3.9
31gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana... 40 3.9
32emb|AL928908.16| Zebrafish DNA sequence from clone DKEY-221L4 in... 40 3.9
33gb|AE005109.1| Halobacterium sp. NRC-1 section 140 of 170 of the... 40 3.9
34dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 3.9
35dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 3.9
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9
37emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chr... 40 3.9 
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
             sequence
          Length = 154558

 Score =  139 bits (70), Expect = 6e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                         
Query: 144   gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 203
             |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 94441 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 94500

                                                                         
Query: 204   gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 263
              | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 94501 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 94560

                           
Query: 264   cggctcgaccatgg 277
              ||||| |||||||
Sbjct: 94561 tggctccaccatgg 94574
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 6e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                            
Query: 144      gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 203
                |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 23257960 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 23258019

                                                                            
Query: 204      gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 263
                 | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 23258020 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 23258079

                              
Query: 264      cggctcgaccatgg 277
                 ||||| |||||||
Sbjct: 23258080 tggctccaccatgg 23258093
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 6e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                            
Query: 144      gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 203
                |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 23250988 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 23251047

                                                                            
Query: 204      gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 263
                 | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 23251048 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 23251107

                              
Query: 264      cggctcgaccatgg 277
                 ||||| |||||||
Sbjct: 23251108 tggctccaccatgg 23251121
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>dbj|AK073307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026A10, full
            insert sequence
          Length = 1337

 Score =  139 bits (70), Expect = 6e-30
 Identities = 118/134 (88%)
 Strand = Plus / Minus

                                                                        
Query: 144  gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 203
            |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1104 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 1045

                                                                        
Query: 204  gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 263
             | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 1044 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 985

                          
Query: 264  cggctcgaccatgg 277
             ||||| |||||||
Sbjct: 984  tggctccaccatgg 971
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>dbj|AK063917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B03, full
            insert sequence
          Length = 1449

 Score =  139 bits (70), Expect = 6e-30
 Identities = 118/134 (88%)
 Strand = Plus / Minus

                                                                        
Query: 144  gatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaagaa 203
            |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1210 gatctggacgttctccacgtccagcttcttgaagttgctgttcttcctggtgctgaagaa 1151

                                                                        
Query: 204  gtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctccaa 263
             | |||||||||||||| || ||||||||| || |||||||||||||| | |||||||| 
Sbjct: 1150 ttcgccccagttgtaggggttgtacctggccgggctctcgtcgctcacgacctcctccag 1091

                          
Query: 264  cggctcgaccatgg 277
             ||||| |||||||
Sbjct: 1090 tggctccaccatgg 1077
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>gb|AY108935.1| Zea mays PCO091688 mRNA sequence
          Length = 1084

 Score =  127 bits (64), Expect = 2e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 142 gcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctggtgctgaag 201
           |||||||| | ||| || |||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 820 gcgatctgaatgttctccacgttgagcttcttgaagttgctgttcttcctggtgctgaag 761

                                                                       
Query: 202 aagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcaccatctcctcc 261
           |||| ||||||||||||||||||||||||||  ||    || | |||||||| |||||||
Sbjct: 760 aagtcgccccagttgtaggcgtcgtacctgggcggatcgtccttgctcaccagctcctcc 701

                           
Query: 262 aacggctcgaccatgg 277
           | |||||| |||||||
Sbjct: 700 accggctccaccatgg 685
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>ref|XM_480999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 939

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Minus

                                                                       
Query: 133 ctgaagtgtgcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctg 192
           ||||| || |||||||| | ||| || ||||| ||||| ||||||| ||  |||||||||
Sbjct: 911 ctgaaatgcgcgatctggatgttgtccacgtccagcttcttgaagtcgccattcttcctg 852

                                                                       
Query: 193 gtgctgaagaagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcacc 252
           ||||||||||| | |||||||  |||||  | ||||||||| || ||||| || ||||| 
Sbjct: 851 gtgctgaagaattcgccccagcagtagggattgtacctggccgggctctcctcactcacg 792

                                    
Query: 253 atctcctccaacggctcgaccatgg 277
           ||||||||||| ||||| |||||||
Sbjct: 791 atctcctccaatggctccaccatgg 767
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                           
Query: 133     ctgaagtgtgcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctg 192
               ||||| || |||||||| | ||| || ||||| ||||| ||||||| ||  |||||||||
Sbjct: 9159653 ctgaaatgcgcgatctggatgttgtccacgtccagcttcttgaagtcgccattcttcctg 9159712

                                                                           
Query: 193     gtgctgaagaagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcacc 252
               ||||||||||| | |||||||  |||||  | ||||||||| || ||||| || ||||| 
Sbjct: 9159713 gtgctgaagaattcgccccagcagtagggattgtacctggccgggctctcctcactcacg 9159772

                                        
Query: 253     atctcctccaacggctcgaccatgg 277
               ||||||||||| ||||| |||||||
Sbjct: 9159773 atctcctccaatggctccaccatgg 9159797
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>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012K14
          Length = 155544

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                         
Query: 133   ctgaagtgtgcgatctgtacgttttcgacgtcgagctttttgaagttgctgttcttcctg 192
             ||||| || |||||||| | ||| || ||||| ||||| ||||||| ||  |||||||||
Sbjct: 95147 ctgaaatgcgcgatctggatgttgtccacgtccagcttcttgaagtcgccattcttcctg 95206

                                                                         
Query: 193   gtgctgaagaagtggccccagttgtaggcgtcgtacctggcgggcctctcgtcgctcacc 252
             ||||||||||| | |||||||  |||||  | ||||||||| || ||||| || ||||| 
Sbjct: 95207 gtgctgaagaattcgccccagcagtagggattgtacctggccgggctctcctcactcacg 95266

                                      
Query: 253   atctcctccaacggctcgaccatgg 277
             ||||||||||| ||||| |||||||
Sbjct: 95267 atctcctccaatggctccaccatgg 95291
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 264      cggctcgaccatggcgtcgctg 285
                ||||||||||||||||||||||
Sbjct: 14402714 cggctcgaccatggcgtcgctg 14402693
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 264   cggctcgaccatggcgtcgctg 285
             ||||||||||||||||||||||
Sbjct: 94517 cggctcgaccatggcgtcgctg 94496
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>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1585_D02
          Length = 103172

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 264  cggctcgaccatggcgtcgctg 285
            ||||||||||||||||||||||
Sbjct: 2279 cggctcgaccatggcgtcgctg 2258
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>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full
           insert sequence
          Length = 1752

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 264 cggctcgaccatggcgtcgctg 285
           ||||||||||||||||||||||
Sbjct: 91  cggctcgaccatggcgtcgctg 112
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>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    tttttgaagttgctgttcttc 189
              |||||||||||||||||||||
Sbjct: 461046 tttttgaagttgctgttcttc 461026
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>gb|AC026398.5| Homo sapiens chromosome 5 clone CTB-127M13, complete sequence
          Length = 88783

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   tttttgaagttgctgttcttc 189
             |||||||||||||||||||||
Sbjct: 44642 tttttgaagttgctgttcttc 44662
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>gb|AF038840.1|AF038840 Dendrobium crumenatum 1-aminocyclopropane-1-carboxylate oxidase
           mRNA, complete cds
          Length = 1544

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 276 ggcgtcgctgccggggttgaagaag 300
           ||||||||||||||||||| |||||
Sbjct: 944 ggcgtcgctgccggggttgtagaag 920
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>gb|AY598795.1| Laelia anceps 1-aminocyclopropane-1-carboxylate oxidase mRNA,
           complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 276 ggcgtcgctgccggggttgaagaa 299
           ||||||||||||||||||| ||||
Sbjct: 732 ggcgtcgctgccggggttgtagaa 709
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>gb|AY598794.1| Cattleya intermedia 1-aminocyclopropane-1-carboxylate oxidase mRNA,
           complete cds
          Length = 1024

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 276 ggcgtcgctgccggggttgaagaa 299
           ||||||||||||||||||| ||||
Sbjct: 731 ggcgtcgctgccggggttgtagaa 708
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>gb|AY598793.1| Cattleya bicolor 1-aminocyclopropane-1-carboxylate oxidase mRNA,
           complete cds
          Length = 1300

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 276 ggcgtcgctgccggggttgaagaa 299
           ||||||||||||||||||| ||||
Sbjct: 997 ggcgtcgctgccggggttgtagaa 974
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>emb|AL589703.6| Human DNA sequence from clone RP11-127L21 on chromosome 9 Contains a
            novel gene and a pseudogene similar to part of tubulin
            beta chain, complete sequence
          Length = 48697

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 171  tttgaagttgctgttcttcc 190
            ||||||||||||||||||||
Sbjct: 3732 tttgaagttgctgttcttcc 3751
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>gb|AC026226.9| Homo sapiens chromosome 10 clone RP11-81B10, complete sequence
          Length = 158556

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tttttgaagttgctgttctt 188
             ||||||||||||||||||||
Sbjct: 91702 tttttgaagttgctgttctt 91683
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    gtagtactattacaaatggt 67
             ||||||||||||||||||||
Sbjct: 61789 gtagtactattacaaatggt 61808
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>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
             sequence
          Length = 131743

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cataaggttggaattaatac 32
             ||||||||||||||||||||
Sbjct: 85519 cataaggttggaattaatac 85500
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>gb|AC016343.5| Homo sapiens chromosome 15, clone RP11-142M4, complete sequence
          Length = 177386

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   tttttgaagttgctgttctt 188
             ||||||||||||||||||||
Sbjct: 29399 tttttgaagttgctgttctt 29418
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 264     cggctcgaccatggcgtcgc 283
               ||||||||||||||||||||
Sbjct: 1716746 cggctcgaccatggcgtcgc 1716765
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>dbj|AK045273.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130054L12
           product:unclassifiable, full insert sequence
          Length = 3126

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 tgctgttcttcctggtgctg 198
           ||||||||||||||||||||
Sbjct: 825 tgctgttcttcctggtgctg 844
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 48       gtagtactattacaaatggt 67
                ||||||||||||||||||||
Sbjct: 19314592 gtagtactattacaaatggt 19314573
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>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
             complete sequence
          Length = 133843

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cataaggttggaattaatac 32
             ||||||||||||||||||||
Sbjct: 94416 cataaggttggaattaatac 94435
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>gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, complete sequence
          Length = 158682

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    tttttgaagttgctgttctt 188
              ||||||||||||||||||||
Sbjct: 134423 tttttgaagttgctgttctt 134442
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>gb|AC012190.3|T22I11 Arabidopsis thaliana chromosome 1 BAC T22I11 sequence, complete
             sequence
          Length = 68986

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cataaggttggaattaatac 32
             ||||||||||||||||||||
Sbjct: 59525 cataaggttggaattaatac 59544
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>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I,
             complete sequence
          Length = 158096

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cataaggttggaattaatac 32
             ||||||||||||||||||||
Sbjct: 31351 cataaggttggaattaatac 31332
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>emb|AL928908.16| Zebrafish DNA sequence from clone DKEY-221L4 in linkage group 17,
             complete sequence
          Length = 229790

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   agttgctgttcttcctggtg 195
             ||||||||||||||||||||
Sbjct: 20937 agttgctgttcttcctggtg 20956
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>gb|AE005109.1| Halobacterium sp. NRC-1 section 140 of 170 of the complete genome
          Length = 12026

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 264  cggctcgaccatggcgtcgctgcc 287
            |||| |||||||||||||||||||
Sbjct: 4039 cggcgcgaccatggcgtcgctgcc 4016
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>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13
          Length = 75709

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cataaggttggaattaatac 32
             ||||||||||||||||||||
Sbjct: 24037 cataaggttggaattaatac 24056
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>dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16
          Length = 82646

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cataaggttggaattaatac 32
             ||||||||||||||||||||
Sbjct: 24542 cataaggttggaattaatac 24561
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 48       gtagtactattacaaatggt 67
                ||||||||||||||||||||
Sbjct: 19325868 gtagtactattacaaatggt 19325849
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>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
              sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    tgctgttcttcctggtgctg 198
              ||||||||||||||||||||
Sbjct: 132693 tgctgttcttcctggtgctg 132674


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,534,585
Number of Sequences: 3902068
Number of extensions: 2534585
Number of successful extensions: 45282
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45117
Number of HSP's gapped (non-prelim): 165
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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