>gb|AC122016.4| Mus musculus BAC clone RP24-359J23 from chromosome 16, complete sequence
          Length = 163943

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 120    catccataaagtctcgccaacatacc 145
              ||||||||||||||| ||||||||||
Sbjct: 138169 catccataaagtctcaccaacatacc 138144

>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete
             sequence
          Length = 209322

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 124   cataaagtctcgccaacatacc 145
             ||||||||||||||||||||||
Sbjct: 78216 cataaagtctcgccaacatacc 78237

>dbj|AK082247.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230028I02
           product:unclassifiable, full insert sequence
          Length = 2209

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 120 catccataaagtctcgccaacatacc 145
           ||||||||||||||| ||||||||||
Sbjct: 734 catccataaagtctcaccaacatacc 759

>emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chromosome 2, complete
             sequence
          Length = 185135

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 70    tagttgtaccatagtacaatag 91
             ||||||||||||||||||||||
Sbjct: 46164 tagttgtaccatagtacaatag 46185

>gb|AC126675.4| Mus musculus BAC clone RP23-430P11 from chromosome 19, complete sequence
          Length = 183462

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 118    ttcatccataaagtctcgccaacat 142
              ||||||||||||||||| |||||||
Sbjct: 104557 ttcatccataaagtctcaccaacat 104533

>gb|AC124394.4| Mus musculus BAC clone RP24-335M3 from chromosome 19, complete sequence
          Length = 171122

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   tccataaagtctcgccaacat 142
             |||||||||||||||||||||
Sbjct: 30313 tccataaagtctcgccaacat 30293

>emb|BX679662.5| Mouse DNA sequence from clone RP23-364B23 on chromosome 2, complete
             sequence
          Length = 59823

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 118   ttcatccataaagtctcgccaacat 142
             ||||||||||||||||||| |||||
Sbjct: 12505 ttcatccataaagtctcgctaacat 12529

>gb|AC156018.2| Mus musculus BAC clone RP24-160I18 from chromosome 16, complete
             sequence
          Length = 162673

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 118   ttcatccataaagtctcgccaacat 142
             ||||||||||||||||| |||||||
Sbjct: 75430 ttcatccataaagtctcaccaacat 75454

>gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complete sequence
          Length = 220883

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 118   ttcatccataaagtctcgccaacat 142
             ||||||||||||||||| |||||||
Sbjct: 60084 ttcatccataaagtctcaccaacat 60108

>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    atatacaaaaccaaacaaca 238
              ||||||||||||||||||||
Sbjct: 115391 atatacaaaaccaaacaaca 115372

>gb|AC124484.5| Mus musculus BAC clone RP24-128N20 from chromosome 12, complete sequence
          Length = 204507

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     tacttagcatgcatagttgt 76
              ||||||||||||||||||||
Sbjct: 133635 tacttagcatgcatagttgt 133616

>emb|AL450467.8| Human DNA sequence from clone RP11-320E16 on chromosome 9 Contains the
             5' end of a novel gene (FLJ35024), the VLDLR gene for very
             low density lipoprotein receptor and a CpG island,
             complete sequence
          Length = 74961

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    tagtacaatagtaagcatatggta 104
             |||||||| |||||||||||||||
Sbjct: 65430 tagtacaaaagtaagcatatggta 65407

>gb|AC107608.6| Rattus norvegicus 1 BAC CH230-204P6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 225030

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    ccataaagtctcgccaacat 142
              ||||||||||||||||||||
Sbjct: 109331 ccataaagtctcgccaacat 109350

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    atatacaaaaccaaacaaca 238
              ||||||||||||||||||||
Sbjct: 685304 atatacaaaaccaaacaaca 685323

>gb|AC010754.10| Homo sapiens chromosome 18, clone RP11-403A21, complete sequence
          Length = 189752

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   atagttcaaccataaacgtt 277
             ||||||||||||||||||||
Sbjct: 37330 atagttcaaccataaacgtt 37349

>emb|X71023.1|LEPDSG Lycopersicon esculentum pds gene for phytoene desaturase
          Length = 8258

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  ttccatatatacaaaaccaa 232
            ||||||||||||||||||||
Sbjct: 6233 ttccatatatacaaaaccaa 6214

>emb|X78271.1|LEPDSGEN L.esculentum (Ailsa Craig) PDS gene
          Length = 8943

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  ttccatatatacaaaaccaa 232
            ||||||||||||||||||||
Sbjct: 6572 ttccatatatacaaaaccaa 6553

>gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, complete sequence
          Length = 209547

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   ccataaagtctcgccaacat 142
             ||||||||||||||||||||
Sbjct: 46082 ccataaagtctcgccaacat 46063

>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence
          Length = 145603

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   atatacaaaaccaaacaaca 238
             ||||||||||||||||||||
Sbjct: 17559 atatacaaaaccaaacaaca 17578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,723,595
Number of Sequences: 3902068
Number of extensions: 2723595
Number of successful extensions: 51483
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51448
Number of HSP's gapped (non-prelim): 35
length of query: 324
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 302
effective length of database: 17,147,199,772
effective search space: 5178454331144
effective search space used: 5178454331144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)