>ref|XM_550206.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1134

 Score =  165 bits (83), Expect = 1e-37
 Identities = 137/155 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 298
           ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 857 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 798

                                                                       
Query: 299 ccgtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgcg 358
           |||| ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| 
Sbjct: 797 ccgttgaagccaggatgggggaccctgcgccgcagctcgcgtccctcctggcagagcgca 738

                                              
Query: 359 caagggtggcagaagtagtgggtcgcaaggtcgca 393
           |||||||| ||||||||||| || |||||||||||
Sbjct: 737 caagggtgacagaagtagtgagttgcaaggtcgca 703

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  165 bits (83), Expect = 1e-37
 Identities = 137/155 (88%)
 Strand = Plus / Minus

                                                                           
Query: 239     gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 298
               ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 3045851 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 3045792

                                                                           
Query: 299     ccgtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgcg 358
               |||| ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| 
Sbjct: 3045791 ccgttgaagccaggatgggggaccctgcgccgcagctcgcgtccctcctggcagagcgca 3045732

                                                  
Query: 359     caagggtggcagaagtagtgggtcgcaaggtcgca 393
               |||||||| ||||||||||| || |||||||||||
Sbjct: 3045731 caagggtgacagaagtagtgagttgcaaggtcgca 3045697



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 127      atcacattacaacatgttga 146
                ||||||||||||||||||||
Sbjct: 16089389 atcacattacaacatgttga 16089370

>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score =  165 bits (83), Expect = 1e-37
 Identities = 137/155 (88%)
 Strand = Plus / Minus

                                                                          
Query: 239    gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 298
              ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 127368 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 127309

                                                                          
Query: 299    ccgtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgcg 358
              |||| ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| 
Sbjct: 127308 ccgttgaagccaggatgggggaccctgcgccgcagctcgcgtccctcctggcagagcgca 127249

                                                 
Query: 359    caagggtggcagaagtagtgggtcgcaaggtcgca 393
              |||||||| ||||||||||| || |||||||||||
Sbjct: 127248 caagggtgacagaagtagtgagttgcaaggtcgca 127214

>dbj|AK072658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134D11, full
           insert sequence
          Length = 1134

 Score =  165 bits (83), Expect = 1e-37
 Identities = 137/155 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 298
           ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 857 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 798

                                                                       
Query: 299 ccgtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgcg 358
           |||| ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| 
Sbjct: 797 ccgttgaagccaggatgggggaccctgcgccgcagctcgcgtccctcctggcagagcgca 738

                                              
Query: 359 caagggtggcagaagtagtgggtcgcaaggtcgca 393
           |||||||| ||||||||||| || |||||||||||
Sbjct: 737 caagggtgacagaagtagtgagttgcaaggtcgca 703

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score =  165 bits (83), Expect = 1e-37
 Identities = 137/155 (88%)
 Strand = Plus / Minus

                                                                         
Query: 239   gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 298
             ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 13891 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 13832

                                                                         
Query: 299   ccgtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgcg 358
             |||| ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| 
Sbjct: 13831 ccgttgaagccaggatgggggaccctgcgccgcagctcgcgtccctcctggcagagcgca 13772

                                                
Query: 359   caagggtggcagaagtagtgggtcgcaaggtcgca 393
             |||||||| ||||||||||| || |||||||||||
Sbjct: 13771 caagggtgacagaagtagtgagttgcaaggtcgca 13737

>gb|AY104312.1| Zea mays PCO074362 mRNA sequence
          Length = 2610

 Score =  157 bits (79), Expect = 3e-35
 Identities = 135/153 (88%), Gaps = 3/153 (1%)
 Strand = Plus / Minus

                                                                        
Query: 241  tcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgccc 300
            ||||||| |||||||||| ||||||||| | || ||||||||||| | ||| ||| ||||
Sbjct: 2292 tcacatgccacgccccatggtctgctccatgggcggcatcatgacaaagacggagtgccc 2233

                                                                        
Query: 301  ---gtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgc 357
               || ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 2232 attgttgaatccagggtggggaaccctgcggcgcagctcgcgaccctcctggcagagggc 2173

                                             
Query: 358  gcaagggtggcagaagtagtgggtcgcaaggtc 390
            ||| |||||||||| ||||||||||||||||||
Sbjct: 2172 gcaggggtggcagaggtagtgggtcgcaaggtc 2140

>gb|BT017175.1| Zea mays clone EL01N0369B02.c mRNA sequence
          Length = 764

 Score =  149 bits (75), Expect = 8e-33
 Identities = 134/153 (87%), Gaps = 3/153 (1%)
 Strand = Plus / Minus

                                                                       
Query: 241 tcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgccc 300
           ||||||| |||||||||| ||||||||| | || ||||||||||| | ||| ||| ||||
Sbjct: 425 tcacatgccacgccccatggtctgctccatgggcggcatcatgacaaagacggagtgccc 366

                                                                       
Query: 301 ---gtagaagccagggtggggaaccctgcggcgcagctcacgaccctcctggcagagcgc 357
              || ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 365 attgttgaatccagggtggggaaccctgcggcgcagctcgcgaccctcctggcagagggc 306

                                            
Query: 358 gcaagggtggcagaagtagtgggtcgcaaggtc 390
           ||| |||||||||| ||||||||| ||||||||
Sbjct: 305 gcaggggtggcagaggtagtgggttgcaaggtc 273

>emb|AL596114.10| Human DNA sequence from clone RP11-274A8 on chromosome 13 Containd the 3'
              end of a novel gene (KIAA0774), a novel gene, the SLC7A1
              gene for solute carrier family 7 (cationic amino acid
              transporter, y+ system), member 1, and a CpG island,
              complete sequence
          Length = 173191

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 115    cacattcacataatcacattac 136
              ||||||||||||||||||||||
Sbjct: 139656 cacattcacataatcacattac 139677

>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an
              ADP-ribosylation factor pseudogene, complete sequence
          Length = 178914

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 182    aaaagatccaagacaacacaa 202
              |||||||||||||||||||||
Sbjct: 168737 aaaagatccaagacaacacaa 168717

>emb|BX511303.8| Zebrafish DNA sequence from clone DKEY-227L13 in linkage group 14,
             complete sequence
          Length = 190512

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   ttgaggttcacattcacataa 127
             |||||||||||||||||||||
Sbjct: 59448 ttgaggttcacattcacataa 59428

>emb|BX927106.11| Zebrafish DNA sequence from clone CH211-121G18 in linkage group 2,
             complete sequence
          Length = 147604

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   tggggaaccctgcggcgcagc 334
             |||||||||||||||||||||
Sbjct: 33888 tggggaaccctgcggcgcagc 33868

>ref|XM_482865.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  ttcacataatcacattacaa 138
            ||||||||||||||||||||
Sbjct: 1738 ttcacataatcacattacaa 1719

>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete sequence
          Length = 209764

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ccaagacaacacaacatcaa 208
              ||||||||||||||||||||
Sbjct: 128742 ccaagacaacacaacatcaa 128761

>gb|AC110784.3| Homo sapiens BAC clone RP11-417D8 from 7, complete sequence
          Length = 38891

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   gcacacatcatattgcagtt 29
            ||||||||||||||||||||
Sbjct: 7297 gcacacatcatattgcagtt 7316

>emb|AL358216.33| Human DNA sequence from clone RP11-809C18 on chromosome 10 Contains two
             novel genes, the gene for a novel protein (FLJ38694
             FLJ38681) and five CpG islands, complete sequence
          Length = 96891

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   cacattcacataatcacatt 134
             ||||||||||||||||||||
Sbjct: 66841 cacattcacataatcacatt 66860

>emb|AL162274.17| Human DNA sequence from clone RP11-45A17 on chromosome 10 Contains the
             BNIP3 gene for BCL2/adenovirus E1B 19kD-interacting
             protein 3, the 5' end of a novel gene, possible ortholog
             of mouse RIKEN cDNA 6330417G02 geneand CpG islands,
             complete sequence
          Length = 148891

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   agccagggtggggaaccctg 325
             ||||||||||||||||||||
Sbjct: 75298 agccagggtggggaaccctg 75317

>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gcacacatcatattgcagtt 29
             ||||||||||||||||||||
Sbjct: 49113 gcacacatcatattgcagtt 49132

>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence
          Length = 160275

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    atgacattattctgtattta 167
              ||||||||||||||||||||
Sbjct: 151763 atgacattattctgtattta 151744

>gb|AC044893.5| Homo sapiens chromosome 8, clone RP11-696E24, complete sequence
          Length = 190121

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   atgacattattctgtattta 167
             ||||||||||||||||||||
Sbjct: 49124 atgacattattctgtattta 49105

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      ttcacataatcacattacaa 138
                ||||||||||||||||||||
Sbjct: 23037085 ttcacataatcacattacaa 23037066

>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0093M23
          Length = 134578

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   atcacattacaacatgttga 146
             ||||||||||||||||||||
Sbjct: 45552 atcacattacaacatgttga 45533

>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ttcacataatcacattacaa 138
             ||||||||||||||||||||
Sbjct: 96813 ttcacataatcacattacaa 96794

>gb|AC152450.4| Mus musculus BAC clone RP24-342M21 from 18, complete sequence
          Length = 161106

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ccaagacaacacaacatcaa 208
              ||||||||||||||||||||
Sbjct: 145938 ccaagacaacacaacatcaa 145919

>dbj|AK063363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-D04, full
            insert sequence
          Length = 1865

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  ttcacataatcacattacaa 138
            ||||||||||||||||||||
Sbjct: 1738 ttcacataatcacattacaa 1719

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     atcatgacgacgacagagcg 297
               ||||||||||||||||||||
Sbjct: 2064517 atcatgacgacgacagagcg 2064536


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,842,552
Number of Sequences: 3902068
Number of extensions: 2842552
Number of successful extensions: 52724
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52626
Number of HSP's gapped (non-prelim): 96
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)