>JARD2_HUMAN (Q92833) Jumonji protein (Jumonji/ARID domain-containing protein 2)|
          Length = 1246

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 151 PAAGPMAYGSSVRGHAHTHTHPP 219
           PAA P   GSS +G A TH HPP
Sbjct: 270 PAAAPST-GSSAKGLAATHHHPP 291

>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 10   TSSLDSRSCSTGDPSPPPHARTASSI 87
            +SS  S SCS+  PSPPP +  +S +
Sbjct: 1050 SSSFPSSSCSSTSPSPPPLSAVSSVV 1075

>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)|
          Length = 645

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 80  LAVRACGGGDGSPVEQERESS 18
           LA  + GGG GSP + ERE S
Sbjct: 82  LAAASSGGGRGSPTDSEREQS 102

>INO80_EMENI (Q5BAZ5) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1612

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 17/57 (29%), Positives = 22/57 (38%)
 Frame = +1

Query: 46  DPSPPPHARTASSIPRTRXXXXXXXXXXXXXXXXAPAAGPMAYGSSVRGHAHTHTHP 216
           DPSP   A +A+  P+                   PA+G   YG S   HAH  + P
Sbjct: 85  DPSPQYQAHSAAGTPQ-------YPLPRPYSGSLLPASGTSPYGPSTPSHAHPSSRP 134

>PRP45_USTMA (Q4PB95) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 638

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 10  TSSLDSRSCSTGDPSPPPHARTASSIPRTR 99
           TSS  S   ST  PS PP+ + A+  PRT+
Sbjct: 55  TSSSSSALVSTSSPSIPPYGQRAAWRPRTQ 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.123    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,637,162
Number of Sequences: 219361
Number of extensions: 342523
Number of successful extensions: 1186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)