>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing
            protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene
            TRE-2)
          Length = 1406

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 171  VSKEGGVCFWCPKTSLCQPCFIIIAPDK 254
            V K+G  C WCP+   C+ C I    D+
Sbjct: 958  VQKDGNSCAWCPQYRFCRGCKIDCGEDR 985

>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 32)
            (Ubiquitin-specific-processing protease 32)
            (Deubiquitinating enzyme 32) (NY-REN-60 antigen)
          Length = 1604

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 171  VSKEGGVCFWCPKTSLCQPCFIIIAPDK 254
            V K+G  C WCP    C+ C I    D+
Sbjct: 1160 VQKDGNSCAWCPWYRFCRGCKIDCGEDR 1187

>RS4E_THEVO (Q97BW4) 30S ribosomal protein S4e|
          Length = 235

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -3

Query: 189 LPLLLKPFHSHRILTALSWMVILLSDNQRSSTTILGADLVKEDG 58
           LP   K  HS  +LT +    + LSD +R +T IL   LVK DG
Sbjct: 28  LPGRHKADHSVTLLTIIR-DYLRLSDKEREATRILANGLVKVDG 70

>FIMB_SCHPO (O59945) Fimbrin|
          Length = 614

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 58  TIFFHQISPQNCSRAPLVITQQNDHPRQSRQYSVRM 165
           T+  +Q++P+ CSRAPL  T       Q  Q + ++
Sbjct: 298 TVLLNQLAPELCSRAPLQTTDVLQRAEQVLQNAEKL 333

>HUT1_SCHPO (Q8WZJ9) UDP-galactose transporter homolog 1|
          Length = 322

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 201 TKNTLPLLLKPFHSHRILTALSWMVILL 118
           T+    +LL  FH H  ++++ W+ ILL
Sbjct: 270 TRKIFTMLLSVFHFHHTVSSIQWLGILL 297

>Y4142_BRAJA (Q89MQ0) UPF0061 protein bll4142|
          Length = 491

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 20  LRFAFDRSYNLAPPSSFTRSAPKIVVELLWLSLNR 124
           + F F  SY+  P S F R AP  V     + LNR
Sbjct: 3   VHFPFQNSYSALPDSFFARVAPTPVAAPRLIKLNR 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,890,536
Number of Sequences: 219361
Number of extensions: 1203705
Number of successful extensions: 2568
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2568
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)