>emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nuclease (bnuc2 gene)
          Length = 1139

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 206 cgttcttcccactgaaaatccggttgaggatcgccgc 242
           |||||||||| ||||| ||||||||||||||||||||
Sbjct: 911 cgttcttcccgctgaagatccggttgaggatcgccgc 875

>emb|AL732538.6| Mouse DNA sequence from clone RP23-242O9 on chromosome 4, complete
              sequence
          Length = 172802

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 102    aaatctctctaatcttattattgttcataa 131
              ||||||||||| ||||||||||||||||||
Sbjct: 111586 aaatctctctattcttattattgttcataa 111557

>emb|BX323086.4| Zebrafish DNA sequence from clone DKEY-170I11 in linkage group 20,
              complete sequence
          Length = 183026

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 104    atctctctaatcttattattgtt 126
              |||||||||||||||||||||||
Sbjct: 135212 atctctctaatcttattattgtt 135190

>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11,
              complete sequence
          Length = 202364

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 104    atctctctaatcttattattgtt 126
              |||||||||||||||||||||||
Sbjct: 173013 atctctctaatcttattattgtt 172991

>emb|CR381700.6| Zebrafish DNA sequence from clone CH211-198F4 in linkage group 14,
              complete sequence
          Length = 203630

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 104    atctctctaatcttattattgt 125
              ||||||||||||||||||||||
Sbjct: 187260 atctctctaatcttattattgt 187281

>gb|BC081056.1| Xenopus laevis MGC81873 protein, mRNA (cDNA clone MGC:81873
            IMAGE:7008612), complete cds
          Length = 1876

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 100  gaaaatctctctaatcttatt 120
            |||||||||||||||||||||
Sbjct: 1709 gaaaatctctctaatcttatt 1729

>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   ctaatcttattattgttcata 130
             |||||||||||||||||||||
Sbjct: 44829 ctaatcttattattgttcata 44849

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     aagtcaacatggtcaaacaaa 96
              |||||||||||||||||||||
Sbjct: 428545 aagtcaacatggtcaaacaaa 428565

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     ccttgcacaatgtccttcgt 163
               ||||||||||||||||||||
Sbjct: 1665417 ccttgcacaatgtccttcgt 1665436

>ref|NM_006827.4| Homo sapiens transmembrane emp24-like trafficking protein 10 (yeast)
            (TMED10), mRNA
          Length = 4108

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1090 atgaagtcaacatggtcacacaaa 1067

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ccttgcacaatgtccttcgt 163
             ||||||||||||||||||||
Sbjct: 73639 ccttgcacaatgtccttcgt 73658

>emb|CR857706.1| Pongo pygmaeus mRNA; cDNA DKFZp459A041 (from clone DKFZp459A041)
          Length = 4194

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1091 atgaagtcaacatggtcacacaaa 1068

>emb|CR613899.1| full-length cDNA clone CS0CAP006YJ20 of Thymus of Homo sapiens
            (human)
          Length = 1273

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1088 atgaagtcaacatggtcacacaaa 1065

>emb|CR612906.1| full-length cDNA clone CS0CAP001YI07 of Thymus of Homo sapiens
            (human)
          Length = 1286

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1064 atgaagtcaacatggtcacacaaa 1041

>emb|CR606438.1| full-length cDNA clone CS0DM007YE02 of Fetal liver of Homo sapiens
            (human)
          Length = 1226

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1057 atgaagtcaacatggtcacacaaa 1034

>emb|CR603760.1| full-length cDNA clone CS0DI051YI06 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1310

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1088 atgaagtcaacatggtcacacaaa 1065

>emb|CR602807.1| full-length cDNA clone CS0DI020YF15 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1006

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  atgaagtcaacatggtcaaacaaa 96
           |||||||||||||||||| |||||
Sbjct: 856 atgaagtcaacatggtcacacaaa 833

>emb|CR599482.1| full-length cDNA clone CS0DI011YB01 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1253

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1096 atgaagtcaacatggtcacacaaa 1073

>emb|CR591402.1| full-length cDNA clone CS0DB002YH22 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 933

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  atgaagtcaacatggtcaaacaaa 96
           |||||||||||||||||| |||||
Sbjct: 743 atgaagtcaacatggtcacacaaa 720

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     ccttgcacaatgtccttcgt 163
               ||||||||||||||||||||
Sbjct: 1665415 ccttgcacaatgtccttcgt 1665434

>emb|AL691403.2|CNS07YOR Human chromosome 14 DNA sequence BAC C-3075F15 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181848

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     atgaagtcaacatggtcaaacaaa 96
              |||||||||||||||||| |||||
Sbjct: 151270 atgaagtcaacatggtcacacaaa 151247

>dbj|AK059624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H06, full
           insert sequence
          Length = 683

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccttgcacaatgtccttcgt 163
           ||||||||||||||||||||
Sbjct: 513 ccttgcacaatgtccttcgt 494

>gb|AC007055.3|AC007055 Homo sapiens chromosome 14 clone BAC 201F1 map 14q24.3, complete
             sequence
          Length = 199927

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    atgaagtcaacatggtcaaacaaa 96
             |||||||||||||||||| |||||
Sbjct: 99568 atgaagtcaacatggtcacacaaa 99591

>gb|AF112193.1|AF112193 Ictalurus punctatus strain Kansas XbaI element 1, complete sequence
          Length = 325

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  acatagtatagtactatgaa 77
           ||||||||||||||||||||
Sbjct: 208 acatagtatagtactatgaa 227

>emb|AL049780.4|CNS00007 Human chromosome 14 DNA sequence BAC R-950C14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195891

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    atgaagtcaacatggtcaaacaaa 96
             |||||||||||||||||| |||||
Sbjct: 27288 atgaagtcaacatggtcacacaaa 27265

>emb|BX248754.1|CNSLT1IAW human full-length cDNA 5-PRIME end of clone CS0DF013YM24 of Fetal
            brain of Homo sapiens (human)
          Length = 1684

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1097 atgaagtcaacatggtcacacaaa 1074

>emb|AL832012.2|HSM803319 Homo sapiens mRNA; cDNA DKFZp451D084 (from clone DKFZp451D084);
            complete cds
          Length = 4108

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1090 atgaagtcaacatggtcacacaaa 1067

>gb|L40397.1|HUMORFG Homo sapiens (clone S31i125) mRNA, 3' end of cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1133 atgaagtcaacatggtcacacaaa 1110

>gb|BC001825.2| Homo sapiens transmembrane emp24-like trafficking protein 10 (yeast),
            mRNA (cDNA clone MGC:3798 IMAGE:2959718), complete cds
          Length = 1387

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1131 atgaagtcaacatggtcacacaaa 1108

>gb|BC001496.2| Homo sapiens transmembrane emp24-like trafficking protein 10 (yeast),
            mRNA (cDNA clone MGC:1979 IMAGE:2959718), complete cds
          Length = 1387

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1131 atgaagtcaacatggtcacacaaa 1108

>gb|U61734.1|HSU61734 Human protein trafficking protein (S31iii125) mRNA, complete cds
          Length = 1359

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1107 atgaagtcaacatggtcacacaaa 1084

>emb|AJ004913.1|HSJ004913 Homo sapiens mRNA for integral membrane protein Tmp21-I (p23)
          Length = 1302

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   atgaagtcaacatggtcaaacaaa 96
            |||||||||||||||||| |||||
Sbjct: 1090 atgaagtcaacatggtcacacaaa 1067

>dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds
          Length = 1180

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 211 ttcccactgaaaatccggttgaggatcgccgc 242
           ||||| ||||| |||||||||||||| |||||
Sbjct: 899 ttcccgctgaagatccggttgaggatggccgc 868

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ccttgcacaatgtccttcgt 163
             ||||||||||||||||||||
Sbjct: 77880 ccttgcacaatgtccttcgt 77899


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,750,373
Number of Sequences: 3902068
Number of extensions: 1750373
Number of successful extensions: 36101
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36016
Number of HSP's gapped (non-prelim): 85
length of query: 242
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 220
effective length of database: 17,147,199,772
effective search space: 3772383949840
effective search space used: 3772383949840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)