ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart51b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL513363.8| Human DNA sequence from clone RP11-351P24 on chr... 46 0.074
2gb|AC170424.1| Rhesus Macaque BAC CH250-53N5 (Children's Hospit... 44 0.29
3gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, co... 44 0.29
4gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cance... 44 0.29
5dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, c... 44 0.29
6gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 44 0.29
7gb|AC116633.4| Homo sapiens BAC clone RP11-452C8 from 4, complet... 44 0.29
8gb|AC108102.2| Homo sapiens chromosome 5 clone RP11-185E12, comp... 44 0.29
9gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chrom... 44 0.29
10gb|AC016708.11| Homo sapiens BAC clone RP11-223M6 from 2, comple... 44 0.29
11gb|AC133964.2| Homo sapiens BAC clone RP11-288B20 from 4, comple... 44 0.29
12gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.1
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.1
14gb|AC091744.5| Homo sapiens BAC clone RP11-372I24 from 7, comple... 42 1.1
15gb|AC004897.1| Homo sapiens PAC clone RP4-811N16 from 7, complet... 42 1.1
16emb|AL357872.23| Human DNA sequence from clone RP11-308P9 on chr... 42 1.1
17emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chro... 42 1.1
18gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's H... 42 1.1
19emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.1
20gb|AC090744.5| Homo sapiens chromosome 11, clone RP11-660K15, co... 42 1.1
21gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
22gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
23gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.1
24gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.1
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
26gb|AC165976.2| Gallus gallus BAC clone CH261-89G17 from chromoso... 42 1.1
27ref|XM_479818.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
28ref|XM_507562.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.5
29ref|XM_479817.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
30ref|XM_507101.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.5
31gb|AC166985.4| Mus musculus chromosome 1, clone RP23-14I20, comp... 40 4.5
32gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, com... 40 4.5
33gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 40 4.5
34gb|AC146432.3| Pan troglodytes BAC clone RP43-19M2 from 7, compl... 40 4.5
35gb|AC004002.1| Homo sapiens BAC clone CTA-356F9 from 7, complete... 40 4.5
36gb|AC121610.2| Mus musculus BAC clone RP23-326L12 from 10, compl... 40 4.5
37gb|AC145864.2| Pan troglodytes BAC clone RP43-6L18 from 7, compl... 40 4.5
38gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, c... 40 4.5
39gb|AE014075.1| Escherichia coli CFT073, complete genome 40 4.5
40gb|AF045642.2| Caenorhabditis elegans cosmid C17H12, complete se... 40 4.5
41gb|CP000243.1| Escherichia coli UTI89, complete genome 40 4.5
42emb|AL513130.11| Human DNA sequence from clone RP11-572D5 on chr... 40 4.5
43emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chr... 40 4.5
44emb|AL365332.9| Human DNA sequence from clone RP11-212L9 on chro... 40 4.5
45emb|AJ437536.2|OSA437536 Oryza sativa mRNA for manganese-binding... 40 4.5
46gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, comp... 40 4.5
47gb|AC084250.6| Homo sapiens chromosome 8, clone RP11-89F14, comp... 40 4.5
48gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, co... 40 4.5
49gb|U91328.1|HSU91328 Human hereditary haemochromatosis region, h... 40 4.5
50gb|AC027584.5| Homo sapiens chromosome 18, clone RP11-214L13, co... 40 4.5
51gb|AC020896.6| Homo sapiens chromosome 5 clone CTC-347C20, compl... 40 4.5
52gb|AC102038.9| Mus musculus chromosome 19, clone RP23-248G20, co... 40 4.5
53gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 4.5
54gb|AC063979.4|AC063979 Homo sapiens chromosome 5 clone RP11-474H... 40 4.5
55dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
56gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, r... 40 4.5
57gb|AC011242.8| Homo sapiens BAC clone RP11-489K22 from 2, comple... 40 4.5
58gb|AC084546.1|CBRG30J20 Caenorhabditis briggsae cosmid G30J20, c... 40 4.5
59gb|AC138057.3| Homo sapiens chromosome 3 clone RP11-285B24, comp... 40 4.5
60gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.5
61gb|AC008955.6| Homo sapiens chromosome 5 clone CTD-2341N17, comp... 40 4.5
62emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chr... 40 4.5
63gb|AC008843.5|AC008843 Homo sapiens chromosome 5 clone CTD-2156N... 40 4.5
64dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
65dbj|AK119899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
66dbj|AK068273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
67dbj|AK067636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
68dbj|AK060602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
69gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64... 40 4.5
70gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.5
71gb|AC135054.2| Homo sapiens chromosome 3 clone RP13-541E6, compl... 40 4.5 
>emb|AL513363.8| Human DNA sequence from clone RP11-351P24 on chromosome 1 Contains the
             5' end of a novel gene, complete sequence
          Length = 109473

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 108   agaaataagaacaaatcaaaccaaaaa 134
             |||||||||||||||||||||| ||||
Sbjct: 95188 agaaataagaacaaatcaaacccaaaa 95214
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>gb|AC170424.1| Rhesus Macaque  BAC CH250-53N5 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 175619

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 108   agaaataagaacaaatcaaacc 129
             ||||||||||||||||||||||
Sbjct: 80340 agaaataagaacaaatcaaacc 80319
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>gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, complete sequence
          Length = 171976

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 108   agaaataagaacaaatcaaaccaaaa 133
             ||||| ||||||||||||||||||||
Sbjct: 89573 agaaacaagaacaaatcaaaccaaaa 89548
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>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 166471

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 108  agaaataagaacaaatcaaaccaaaa 133
            ||||| ||||||||||||||||||||
Sbjct: 9668 agaaacaagaacaaatcaaaccaaaa 9643
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>dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, complete sequences
          Length = 193714

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 108  agaaataagaacaaatcaaaccaaaa 133
            ||||| ||||||||||||||||||||
Sbjct: 7675 agaaacaagaacaaatcaaaccaaaa 7700
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 108     agaaataagaacaaatcaaaccaaaa 133
               ||||| ||||||||||||||||||||
Sbjct: 5852478 agaaacaagaacaaatcaaaccaaaa 5852503
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>gb|AC116633.4| Homo sapiens BAC clone RP11-452C8 from 4, complete sequence
          Length = 136725

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 108    agaaataagaacaaatcaaacc 129
              ||||||||||||||||||||||
Sbjct: 136407 agaaataagaacaaatcaaacc 136428
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>gb|AC108102.2| Homo sapiens chromosome 5 clone RP11-185E12, complete sequence
          Length = 161056

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 108   agaaataagaacaaatcaaacc 129
             ||||||||||||||||||||||
Sbjct: 24138 agaaataagaacaaatcaaacc 24117
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>gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chromosome y, complete
             sequence
          Length = 178039

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 108   agaaataagaacaaatcaaaccaaaa 133
             ||||| ||||||||||||||||||||
Sbjct: 13195 agaaacaagaacaaatcaaaccaaaa 13220
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>gb|AC016708.11| Homo sapiens BAC clone RP11-223M6 from 2, complete sequence
          Length = 194304

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 108   agaaataagaacaaatcaaacc 129
             ||||||||||||||||||||||
Sbjct: 27553 agaaataagaacaaatcaaacc 27574
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>gb|AC133964.2| Homo sapiens BAC clone RP11-288B20 from 4, complete sequence
          Length = 32393

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 108  agaaataagaacaaatcaaacc 129
            ||||||||||||||||||||||
Sbjct: 1682 agaaataagaacaaatcaaacc 1703
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 283     cccgcgccggcgccgcgagcg 303
               |||||||||||||||||||||
Sbjct: 1727649 cccgcgccggcgccgcgagcg 1727669
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 280     ccacccgcgccggcgccgcga 300
               |||||||||||||||||||||
Sbjct: 8822753 ccacccgcgccggcgccgcga 8822773
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>gb|AC091744.5| Homo sapiens BAC clone RP11-372I24 from 7, complete sequence
          Length = 23032

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   aagaacaaatcaaaccaaaaa 134
             |||||||||||||||||||||
Sbjct: 20542 aagaacaaatcaaaccaaaaa 20562
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>gb|AC004897.1| Homo sapiens PAC clone RP4-811N16 from 7, complete sequence
          Length = 90731

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   cgctgtcacagcccccaccag 230
             |||||||||||||||||||||
Sbjct: 38712 cgctgtcacagcccccaccag 38732
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>emb|AL357872.23| Human DNA sequence from clone RP11-308P9 on chromosome 9 Contains a CpG
             island, complete sequence
          Length = 93172

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 108   agaaataagaacaaatcaaaccaaa 132
             ||||| |||||||||||||||||||
Sbjct: 79602 agaaacaagaacaaatcaaaccaaa 79626
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>emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chromosome X Contains the gene
              for hepatocellular carcinoma-associated antigen 127
              (HCA127) (FLJ12856, FLJ12856, KIAA1166), complete sequence
          Length = 163283

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 108    agaaataagaacaaatcaaaccaaa 132
              ||||||||||||||| |||||||||
Sbjct: 137329 agaaataagaacaaaccaaaccaaa 137353
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>gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 233080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 108    agaaataagaacaaatcaaaccaaa 132
              |||||| ||||||||||||||||||
Sbjct: 222861 agaaatcagaacaaatcaaaccaaa 222885
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 283     cccgcgccggcgccgcgagcg 303
               |||||||||||||||||||||
Sbjct: 3062523 cccgcgccggcgccgcgagcg 3062543
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>gb|AC090744.5| Homo sapiens chromosome 11, clone RP11-660K15, complete sequence
          Length = 195434

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    gaaataagaacaaatcaaacc 129
              |||||||||||||||||||||
Sbjct: 174224 gaaataagaacaaatcaaacc 174244
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>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
             complete sequence
          Length = 126027

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   ccacccgcgccggcgccgcga 300
             |||||||||||||||||||||
Sbjct: 13641 ccacccgcgccggcgccgcga 13661
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>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
             complete sequence
          Length = 112265

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   ccacccgcgccggcgccgcga 300
             |||||||||||||||||||||
Sbjct: 65906 ccacccgcgccggcgccgcga 65926
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 279     accacccgcgccggcgccgcgagcg 303
               |||||||||||||||||||| ||||
Sbjct: 2983804 accacccgcgccggcgccgccagcg 2983780
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 283     cccgcgccggcgccgcgagcg 303
               |||||||||||||||||||||
Sbjct: 2211204 cccgcgccggcgccgcgagcg 2211224
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 280     ccacccgcgccggcgccgcga 300
               |||||||||||||||||||||
Sbjct: 8820588 ccacccgcgccggcgccgcga 8820608
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>gb|AC165976.2| Gallus gallus BAC clone CH261-89G17 from chromosome ul, complete sequence
          Length = 176724

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     tataatgagcagaaataagaa 118
              |||||||||||||||||||||
Sbjct: 143317 tataatgagcagaaataagaa 143337
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>ref|XM_479818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1072

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 399 gcgccgcgagcgccgcgtccgtcgacgc 426
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>ref|XM_507562.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.27
           mRNA
          Length = 943

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 381 gcgccgcgagcgccgcgtccgtcgacgc 354
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>ref|XM_479817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 878

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 311 gcgccgcgagcgccgcgtccgtcgacgc 284
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>ref|XM_507101.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.27
           mRNA
          Length = 907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 311 gcgccgcgagcgccgcgtccgtcgacgc 284
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>gb|AC166985.4| Mus musculus chromosome 1, clone RP23-14I20, complete sequence
          Length = 191452

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ataatgagcagaaataagaa 118
              ||||||||||||||||||||
Sbjct: 172789 ataatgagcagaaataagaa 172808
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>gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, complete sequence
          Length = 188055

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     ataatgagcagaaataagaa 118
              ||||||||||||||||||||
Sbjct: 145453 ataatgagcagaaataagaa 145434
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 117   aacaaatcaaaccaaaaagaccaacaac 144
             |||||| |||| ||||||||||||||||
Sbjct: 55726 aacaaaacaaaacaaaaagaccaacaac 55753
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>gb|AC146432.3| Pan troglodytes BAC clone RP43-19M2 from 7, complete sequence
          Length = 177888

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   aataagaacaaatcaaaccaaaaa 134
             ||||||||||||||||||| ||||
Sbjct: 24166 aataagaacaaatcaaacccaaaa 24189
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>gb|AC004002.1| Homo sapiens BAC clone CTA-356F9 from 7, complete sequence
          Length = 112314

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   aataagaacaaatcaaaccaaaaa 134
             ||||||||||||||||||| ||||
Sbjct: 26705 aataagaacaaatcaaacccaaaa 26682
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>gb|AC121610.2| Mus musculus BAC clone RP23-326L12 from 10, complete sequence
          Length = 192060

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   aaataagaacaaatcaaaccaaaa 133
             |||||| |||||||||||||||||
Sbjct: 49201 aaataaaaacaaatcaaaccaaaa 49224
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>gb|AC145864.2| Pan troglodytes BAC clone RP43-6L18 from 7, complete sequence
          Length = 206128

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   aataagaacaaatcaaaccaaaaa 134
             ||||||||||||||||||| ||||
Sbjct: 10370 aataagaacaaatcaaacccaaaa 10347
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>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence
          Length = 193390

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   aaataagaacaaatcaaaccaaaa 133
             |||||||||||||||||| |||||
Sbjct: 43029 aaataagaacaaatcaaagcaaaa 43006
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 219     agcccccaccagacgcacgccagt 242
               |||||||||||||||| |||||||
Sbjct: 3227084 agcccccaccagacgcccgccagt 3227061
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>gb|AF045642.2| Caenorhabditis elegans cosmid C17H12, complete sequence
          Length = 47345

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   tgaaaagtgagcaaaaaaga 167
             ||||||||||||||||||||
Sbjct: 34715 tgaaaagtgagcaaaaaaga 34734
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 219     agcccccaccagacgcacgccagt 242
               |||||||||||||||| |||||||
Sbjct: 3106721 agcccccaccagacgcccgccagt 3106698
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>emb|AL513130.11| Human DNA sequence from clone RP11-572D5 on chromosome 1 Contains
            part of the RYR2 gene for ryanodine receptor 2 (cardiac),
            complete sequence
          Length = 19799

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 111  aataagaacaaatcaaaccaaaaa 134
            ||||| ||||||||||||||||||
Sbjct: 1062 aataaaaacaaatcaaaccaaaaa 1039
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>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a
             CpG island, complete sequence
          Length = 171985

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   aagaacaaatcaaaccaaaa 133
             ||||||||||||||||||||
Sbjct: 69845 aagaacaaatcaaaccaaaa 69826
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>emb|AL365332.9| Human DNA sequence from clone RP11-212L9 on chromosome 1 Contains part of
              the RYR2 gene for ryanodine receptor 2 (cardiac) and a CpG
              island, complete sequence
          Length = 166307

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    aataagaacaaatcaaaccaaaaa 134
              ||||| ||||||||||||||||||
Sbjct: 165369 aataaaaacaaatcaaaccaaaaa 165346
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>emb|AJ437536.2|OSA437536 Oryza sativa mRNA for manganese-binding PsbY-like protein precursor
           (MgBP1 gene)
          Length = 706

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 312 gcgccgcgagcgccgcgtccgtcgacgc 285
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>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence
          Length = 170722

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aaataagaacaaatcaaacc 129
             ||||||||||||||||||||
Sbjct: 97725 aaataagaacaaatcaaacc 97744
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>gb|AC084250.6| Homo sapiens chromosome 8, clone RP11-89F14, complete sequence
          Length = 151889

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aaataagaacaaatcaaacc 129
             ||||||||||||||||||||
Sbjct: 14157 aaataagaacaaatcaaacc 14138
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>gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, complete sequence
          Length = 202566

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 124    caaaccaaaaagaccaacaacctt 147
              ||||||||||||||| ||||||||
Sbjct: 185225 caaaccaaaaagacctacaacctt 185202
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>gb|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene,
              hereditary haemochromatosis (HLA-H) gene, RoRet gene, and
              sodium phosphate transporter (NPT3) gene, complete cds
          Length = 246282

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    aaataagaacaaatcaaacc 129
              ||||||||||||||||||||
Sbjct: 191856 aaataagaacaaatcaaacc 191875
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>gb|AC027584.5| Homo sapiens chromosome 18, clone RP11-214L13, complete sequence
          Length = 144003

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   caaaccaaaaagaccaacaacctt 147
             ||||||||||||||| ||||||||
Sbjct: 15370 caaaccaaaaagacctacaacctt 15347
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>gb|AC020896.6| Homo sapiens chromosome 5 clone CTC-347C20, complete sequence
          Length = 169835

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    aaataagaacaaatcaaacc 129
              ||||||||||||||||||||
Sbjct: 155774 aaataagaacaaatcaaacc 155755
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>gb|AC102038.9| Mus musculus chromosome 19, clone RP23-248G20, complete sequence
          Length = 159945

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    agaaataagaacaaatcaaa 127
              ||||||||||||||||||||
Sbjct: 114821 agaaataagaacaaatcaaa 114802
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 284     ccgcgccggcgccgcgagcg 303
               ||||||||||||||||||||
Sbjct: 1344586 ccgcgccggcgccgcgagcg 1344567
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>gb|AC063979.4|AC063979 Homo sapiens chromosome 5 clone RP11-474H20, complete sequence
          Length = 173660

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aaataagaacaaatcaaacc 129
             ||||||||||||||||||||
Sbjct: 97178 aaataagaacaaatcaaacc 97197
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 292     gcgccgcgagcgacgtgtccgtcgacgc 319
               |||||||||||| || ||||||||||||
Sbjct: 1084008 gcgccgcgagcgccgcgtccgtcgacgc 1084035
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>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone
              BACR12P10, complete sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     acatttatttagtagcattacata 42
              |||||||||||||||| |||||||
Sbjct: 160795 acatttatttagtagctttacata 160818
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>gb|AC011242.8| Homo sapiens BAC clone RP11-489K22 from 2, complete sequence
          Length = 186091

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   gaaaagtgagcaaaaaagat 168
             ||||||||||||||||||||
Sbjct: 61550 gaaaagtgagcaaaaaagat 61569
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>gb|AC084546.1|CBRG30J20 Caenorhabditis briggsae cosmid G30J20, complete sequence
          Length = 35833

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   aagaacaaatcaaaccaaaaagac 137
             ||||||||||||||||| ||||||
Sbjct: 15366 aagaacaaatcaaaccagaaagac 15343
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>gb|AC138057.3| Homo sapiens chromosome 3 clone RP11-285B24, complete sequence
          Length = 185935

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    aaataagaacaaatcaaacc 129
              ||||||||||||||||||||
Sbjct: 151977 aaataagaacaaatcaaacc 151958
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     acccgcgccggcgccgcgag 301
               ||||||||||||||||||||
Sbjct: 2969906 acccgcgccggcgccgcgag 2969887
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>gb|AC008955.6| Homo sapiens chromosome 5 clone CTD-2341N17, complete sequence
          Length = 104070

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaaaagaccaacaacctttg 149
             ||||||||||||||||||||
Sbjct: 92114 aaaaagaccaacaacctttg 92133
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>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete
              sequence
          Length = 205765

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tgagcagaaataagaacaaa 122
              ||||||||||||||||||||
Sbjct: 111641 tgagcagaaataagaacaaa 111660
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>gb|AC008843.5|AC008843 Homo sapiens chromosome 5 clone CTD-2156N14, complete sequence
          Length = 121063

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aaataagaacaaatcaaacc 129
             ||||||||||||||||||||
Sbjct: 44239 aaataagaacaaatcaaacc 44258
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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 292    gcgccgcgagcgacgtgtccgtcgacgc 319
              |||||||||||| || ||||||||||||
Sbjct: 112535 gcgccgcgagcgccgcgtccgtcgacgc 112562
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>dbj|AK119899.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-E07, full
           insert sequence
          Length = 1072

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 399 gcgccgcgagcgccgcgtccgtcgacgc 426
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>dbj|AK068273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136L01, full
           insert sequence
          Length = 878

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 311 gcgccgcgagcgccgcgtccgtcgacgc 284
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>dbj|AK067636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109P06, full
           insert sequence
          Length = 907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 311 gcgccgcgagcgccgcgtccgtcgacgc 284
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>dbj|AK060602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H10, full
           insert sequence
          Length = 943

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 292 gcgccgcgagcgacgtgtccgtcgacgc 319
           |||||||||||| || ||||||||||||
Sbjct: 381 gcgccgcgagcgccgcgtccgtcgacgc 354
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>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the complete
              sequence
          Length = 247876

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     acatttatttagtagcattacata 42
              |||||||||||||||| |||||||
Sbjct: 218954 acatttatttagtagctttacata 218977
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gtgtccgtcgacgcgtcggc 325
              ||||||||||||||||||||
Sbjct: 708487 gtgtccgtcgacgcgtcggc 708468
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>gb|AC135054.2| Homo sapiens chromosome 3 clone RP13-541E6, complete sequence
          Length = 156118

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aaataagaacaaatcaaacc 129
             ||||||||||||||||||||
Sbjct: 74047 aaataagaacaaatcaaacc 74028


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,221,804
Number of Sequences: 3902068
Number of extensions: 3221804
Number of successful extensions: 72508
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71370
Number of HSP's gapped (non-prelim): 1138
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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