>MRKC_KLEPN (P21647) Outer membrane usher protein mrkC precursor|
          Length = 828

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -1

Query: 348 GYIYIASASSLACFP------FGPGVVFQFIRTMHACVLGSIYKIDPDRAVTPALLGLGS 187
           G +  A A +L CFP        PG ++QF       ++GS  K+DP R  T A+    S
Sbjct: 9   GRLSTAIAVALCCFPPFSSGQESPGTIYQF---NDGFIVGSREKVDPSRFSTSAI----S 61

Query: 186 EGFY 175
           EG Y
Sbjct: 62  EGVY 65

>PROA_RHOS4 (Q3IXX7) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 420

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 LCHSHS*GKANYKTLREGCSNRNLRSQGLAGQGSLLDLDRSYIS 245
           +CH ++ G+A+ +  R    N   R  G+ G    L +DR++++
Sbjct: 232 ICHVYADGEADLEKARRVVLNAKTRRTGICGSAECLLIDRAFLA 275

>MDGA1_HUMAN (Q8NFP4) MAM domain-containing glycosylphosphatidylinositol anchor|
           protein 1 precursor (MAM domain-containing protein 3)
           (GPI and MAM protein) (Glycosylphosphatidylinositol-MAM)
           (GPIM)
          Length = 955

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 58  HKLTKNNSFTMQGEKREGYFVTPIAKGRLITR 153
           HKL+KN S+ +Q  +RE   V P+   RL  R
Sbjct: 650 HKLSKNYSYVLQWTQREPDAVDPVLNYRLSIR 681

>GLGX_SHIFL (Q83J89) Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon|
           protein glgX)
          Length = 657

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 114 LCHSHS*GKANYKTLREGCSNRNLRSQGLAGQGSLLDL 227
           +C +H   +AN +  R+G +N    + G  G G  LDL
Sbjct: 451 VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGTLDL 488

>GLGX_ECOL6 (Q8FCR8) Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon|
           protein glgX)
          Length = 657

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 114 LCHSHS*GKANYKTLREGCSNRNLRSQGLAGQGSLLDL 227
           +C +H   +AN +  R+G +N    + G  G G  LDL
Sbjct: 451 VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGTLDL 488

>GLGX_ECO57 (Q8X6X8) Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon|
           protein glgX)
          Length = 657

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 114 LCHSHS*GKANYKTLREGCSNRNLRSQGLAGQGSLLDL 227
           +C +H   +AN +  R+G +N    + G  G G  LDL
Sbjct: 451 VCFNHKHNEANGEENRDGTNNNYSNNHGKEGVGGTLDL 488

>NUMM_CAEEL (Q19724) Probable NADH-ubiquinone oxidoreductase 13 kDa-A subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-13KD-A) (CI-13KD-A)
          Length = 140

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 GHCSIWIDLIYRSQHACMHCSNKLKDNTGSKRE 309
           GH  ++I+L     HAC +C N+  ++  +K E
Sbjct: 99  GHPKVYINLDKPGVHACGYCGNRFYNSHATKAE 131

>GLGX_ECOLI (P15067) Glycogen debranching enzyme (EC 3.2.1.-) (Glycogen operon|
           protein glgX)
          Length = 657

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 114 LCHSHS*GKANYKTLREGCSNRNLRSQGLAGQGSLLDL 227
           +C +H   +AN +  R+G +N    + G  G G  LDL
Sbjct: 451 VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDL 488

>YNE0_YEAST (P53960) Hypothetical 51.0 kDa protein in YIP3-TFC5 intergenic|
           region
          Length = 456

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 25  NILTCQQRSHHHKLTKNNSFTMQGEKREGYFVTPIAK 135
           N+L+C +     K+T+      Q  KRE Y++  +A+
Sbjct: 294 NLLSCSETQISEKITRQTKQIQQLNKREQYWIKRLAR 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,634,340
Number of Sequences: 219361
Number of extensions: 946256
Number of successful extensions: 1647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)