Clone Name | rbart51a01 |
---|---|
Clone Library Name | barley_pub |
>SYI_ENTFA (Q836V1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 926 Score = 31.6 bits (70), Expect = 0.59 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +2 Query: 11 WSFIYSMEKLLQLATQCNKPSRHALKQQESIFKTWM-HLDLQEKN*FRDEVLKTQRHAAH 187 WSF+ E+ +QLA P +E + TW +D FRD VLK A H Sbjct: 767 WSFLQEEEEYVQLA---EFPGYETFTNEEELMDTWAAFMD------FRDNVLKALEEARH 817 Query: 188 S 190 S Sbjct: 818 S 818
>Z585B_PONPY (Q5RB30) Zinc finger protein 585B| Length = 769 Score = 30.8 bits (68), Expect = 1.0 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 113 WMHLDLQEKN*FRDEVLKTQRH 178 W HLDL ++N +RD +L+T H Sbjct: 41 WQHLDLSQRNLYRDVMLETYSH 62
>Z585B_HUMAN (Q52M93) Zinc finger protein 585B (zinc finger protein 41-like| protein) Length = 769 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 113 WMHLDLQEKN*FRDEVLKTQRH 178 W HLDL ++N +RD +L+T H Sbjct: 41 WRHLDLSQRNLYRDVMLETYSH 62
>EURL_MOUSE (Q9D7G4) Protein EURL homolog| Length = 290 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 2 KANWSFIYSMEKLLQLATQCNKPSRHAL 85 K NW Y+ K L L ++C+K S+H L Sbjct: 93 KINWIVQYAQNKNLDLESECSKTSQHPL 120
>SYL_PORGI (Q7MW49) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 925 Score = 29.3 bits (64), Expect = 2.9 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 209 LGLTRANYALRDAVFSRPR 153 LG + NY LRDA+FSR R Sbjct: 467 LGCVKVNYRLRDAIFSRQR 485
>SYL_BACTN (Q8A329) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 944 Score = 28.9 bits (63), Expect = 3.8 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 209 LGLTRANYALRDAVFSRPR 153 LG + NY LRDA+FSR R Sbjct: 470 LGRVKVNYRLRDAIFSRQR 488
>GPA6_CAEEL (Q93743) Guanine nucleotide-binding protein alpha-6 subunit| Length = 364 Score = 28.5 bits (62), Expect = 5.0 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = +2 Query: 17 FIYSMEKLLQLATQCNKPSRHALKQQESIFKTWMHLDL 130 FI SM QL + NK +R +KQ IFKT +H DL Sbjct: 234 FIVSMSDYDQLDPEDNKYNR--MKQSYEIFKTIVHSDL 269
>Z585A_HUMAN (Q6P3V2) Zinc finger protein 585A| Length = 769 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +2 Query: 113 WMHLDLQEKN*FRDEVLKTQRH 178 W HLD ++N +RD +L+T H Sbjct: 41 WRHLDPSQRNLYRDVMLETYSH 62
>Z585A_PONPY (Q5RDX1) Zinc finger protein 585A| Length = 737 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +2 Query: 113 WMHLDLQEKN*FRDEVLKTQRH 178 W HLD ++N +RD +L+T H Sbjct: 9 WRHLDPSQRNLYRDVMLETYSH 30 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,592,135 Number of Sequences: 219361 Number of extensions: 421576 Number of successful extensions: 990 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 990 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)