Clone Name | rbart50h11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC068288.6| Homo sapiens BAC clone RP11-592A2 from 2, complet... | 38 | 0.67 | 2 | emb|AL158140.9| Human DNA sequence from clone RP11-217H19 on chr... | 36 | 2.7 | 3 | gb|AC026412.4| Homo sapiens chromosome 5 clone CTD-2012J19, comp... | 36 | 2.7 | 4 | emb|CR931691.1| Streptococcus pneumoniae strain nr. 34371 (serot... | 36 | 2.7 |
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>gb|AC068288.6| Homo sapiens BAC clone RP11-592A2 from 2, complete sequence Length = 124541 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 ttgtctaccttttcttgcc 29 ||||||||||||||||||| Sbjct: 84792 ttgtctaccttttcttgcc 84810
>emb|AL158140.9| Human DNA sequence from clone RP11-217H19 on chromosome Xq13.3-21.2 Contains the 3' end of a novel pseudogene, complete sequence Length = 94862 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 acttgtctaccttttctt 26 |||||||||||||||||| Sbjct: 79162 acttgtctaccttttctt 79179
>gb|AC026412.4| Homo sapiens chromosome 5 clone CTD-2012J19, complete sequence Length = 128694 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 accccacttgtctacctt 21 |||||||||||||||||| Sbjct: 73019 accccacttgtctacctt 73036
>emb|CR931691.1| Streptococcus pneumoniae strain nr. 34371 (serotype 27) Length = 20135 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 acttgtctaccttttctt 26 |||||||||||||||||| Sbjct: 9532 acttgtctaccttttctt 9549 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 189,041 Number of Sequences: 3902068 Number of extensions: 189041 Number of successful extensions: 54220 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54216 Number of HSP's gapped (non-prelim): 4 length of query: 32 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 12 effective length of database: 17,155,003,908 effective search space: 205860046896 effective search space used: 205860046896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)