Clone Name | rbart50h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NAL13_HUMAN (Q86W25) NACHT-, LRR- and PYD-containing protein 13 ... | 31 | 0.83 | 2 | YR297_MIMIV (Q5UPY3) Hypothetical protein R297 | 28 | 4.1 | 3 | OXGR1_HUMAN (Q96P68) 2-oxoglutarate receptor 1 (Alpha-ketoglutar... | 28 | 5.4 | 4 | HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic s... | 28 | 7.0 | 5 | Y241_MYCGE (P47483) Hypothetical protein MG241 | 28 | 7.0 |
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>NAL13_HUMAN (Q86W25) NACHT-, LRR- and PYD-containing protein 13| (Nucleotide-binding oligomerization domain protein 14) Length = 1043 Score = 30.8 bits (68), Expect = 0.83 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Frame = +2 Query: 98 LEITTNNTVEHKVHANIKHIWQE*TKYLVSTHNLHPESNTNKTR*LNA--G*ECRQKYSR 271 LEI + + ++HA W LV+ NLH +N ++ G K R Sbjct: 700 LEILETSKFDSRMHA-----WNSICSTLVTNENLHELDLSNSKLHASSVKGLCLALKNPR 754 Query: 272 NQPSKLTTKFTTPRWHIYHLLDKKQQNS 355 + KLT K TP W + L+ Q NS Sbjct: 755 CKVQKLTCKSVTPEWVLQDLIIALQGNS 782
>YR297_MIMIV (Q5UPY3) Hypothetical protein R297| Length = 168 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/36 (27%), Positives = 22/36 (61%) Frame = +2 Query: 257 QKYSRNQPSKLTTKFTTPRWHIYHLLDKKQQNSDFY 364 ++Y+ NQP++L T+ P ++ + + + N +FY Sbjct: 80 KQYNYNQPNRLQTRSVRPNYYSGYRYNNRTGNQEFY 115
>OXGR1_HUMAN (Q96P68) 2-oxoglutarate receptor 1 (Alpha-ketoglutarate receptor 1)| (G-protein coupled receptor 80) (G-protein coupled receptor 99) (P2Y purinoceptor 15) (P2Y-like nucleotide receptor) (P2Y-like GPCR) Length = 337 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/41 (26%), Positives = 20/41 (48%) Frame = -2 Query: 175 FSLFLPYVFYVCMDLMLYCVVSCDLQLISLYLDLAEEVACS 53 F+L+ +F C + YCV+ + S++ VAC+ Sbjct: 115 FNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACA 155
>HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) (HAT B) Length = 467 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +2 Query: 302 TTPRWHIYHLLDKKQQNSD 358 T P WH+Y L+ KK++ D Sbjct: 203 TDPDWHLYLLIQKKEEKED 221
>Y241_MYCGE (P47483) Hypothetical protein MG241| Length = 620 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = +2 Query: 257 QKYSRNQPSKLTTKFTTPRWHIYHLLDKKQQ---NSDFYFS 370 +KYS NQP KL+ T +Y L K++Q +DF+F+ Sbjct: 322 EKYSTNQPQKLSLNST-----VYVLQTKQKQFFLKNDFFFN 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,810,302 Number of Sequences: 219361 Number of extensions: 960471 Number of successful extensions: 1830 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1830 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)