>gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRNA, partial cds
          Length = 382

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 35/36 (97%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                               
Query: 273 atcagccatcaaaactgactaca-aagttcacgaca 307
           ||||||||||||||||||||||| ||||||||||||
Sbjct: 365 atcagccatcaaaactgactacagaagttcacgaca 330

>gb|AY753062.1| Penaeus monodon clone t2603 microsatellite sequence
          Length = 656

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 13  aaatttccaattttattttcat 34
           ||||||||||||||||||||||
Sbjct: 587 aaatttccaattttattttcat 608

>gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex BAC MMU404O15, complete
             sequence
          Length = 157177

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 8     ggagtaaatttccaattttatt 29
             ||||||||||||||||||||||
Sbjct: 50526 ggagtaaatttccaattttatt 50505

>gb|AC120305.6| Homo sapiens 3 BAC RP11-570H17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 95234

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    aattttattttcataatagatt 42
             ||||||||||||||||||||||
Sbjct: 73847 aattttattttcataatagatt 73868

>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the
           complete sequence
          Length = 253001

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  atttccaattttattttcata 35
           |||||||||||||||||||||
Sbjct: 764 atttccaattttattttcata 744

>gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete sequence
          Length = 184109

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    tccaattttattttcataata 38
             |||||||||||||||||||||
Sbjct: 93659 tccaattttattttcataata 93679

>gb|AC147837.2| Xenopus tropicalis clone CH216-28I17, complete sequence
          Length = 181178

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     tccaattttattttcataata 38
              |||||||||||||||||||||
Sbjct: 101014 tccaattttattttcataata 100994

>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     tccaattttattttcataata 38
              |||||||||||||||||||||
Sbjct: 131704 tccaattttattttcataata 131684

>emb|Z93378.1|CEF19H8 Caenorhabditis elegans Cosmid F19H8, complete sequence
          Length = 31423

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    aaatttccaattttattttcataat 37
             |||||||||||||| ||||||||||
Sbjct: 17701 aaatttccaattttcttttcataat 17725

>gb|AC112910.3| Homo sapiens 3 BAC RP11-273F12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 115927

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      gagtaaatttccaattttatt 29
              |||||||||||||||||||||
Sbjct: 110463 gagtaaatttccaattttatt 110483

>gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome 17, complete
            sequence
          Length = 215626

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 260  aagtactcaagaaatcagccatcaa 284
            |||||||||||||| ||||||||||
Sbjct: 3171 aagtactcaagaaaccagccatcaa 3195

>gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosome 17, complete
             sequence
          Length = 191047

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 260   aagtactcaagaaatcagccatcaa 284
             |||||||||||||| ||||||||||
Sbjct: 73532 aagtactcaagaaaccagccatcaa 73508

>gb|AC008173.2| Homo sapiens BAC clone RP11-374F15 from 2, complete sequence
          Length = 193893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     aatttccaattttattttcat 34
              |||||||||||||||||||||
Sbjct: 100614 aatttccaattttattttcat 100594

>emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 in linkage group 17,
             complete sequence
          Length = 217707

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    taaatttccaattttattttcataa 36
             ||||||||||||||| |||||||||
Sbjct: 44653 taaatttccaatttttttttcataa 44629

>ref|XM_533355.2| PREDICTED: Canis familiaris similar to RAP1 interacting factor 1
            (LOC476148), mRNA
          Length = 4636

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   gaggtataatgatatcaactggag 103
            |||||| |||||||||||||||||
Sbjct: 3556 gaggtaaaatgatatcaactggag 3533

>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    aaacacatatggcaggaata 168
              ||||||||||||||||||||
Sbjct: 148586 aaacacatatggcaggaata 148567

>gb|AC112342.14| Rattus norvegicus 14 BAC CH230-253H12 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 150292

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 3     atgggggagtaaatttccaattttattt 30
             |||||| ||||||||| |||||||||||
Sbjct: 97810 atggggaagtaaattttcaattttattt 97783

>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a novel
              gene and part of a novel gene, complete sequence
          Length = 145630

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    atgcaaacataaaacacata 157
              ||||||||||||||||||||
Sbjct: 114195 atgcaaacataaaacacata 114214

>emb|AL356389.20| Human DNA sequence from clone RP11-352P4 on chromosome 1 Contains the
            3' end of the gene for maba1 (KIAA1324) and the SARS gene
            for seryl-tRNA synthetase, complete sequence
          Length = 97114

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   caggagccactacatgcaac 64
            ||||||||||||||||||||
Sbjct: 8548 caggagccactacatgcaac 8529

>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete
             sequence
          Length = 139086

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   ccatcaaaactgactacaaa 297
             ||||||||||||||||||||
Sbjct: 50732 ccatcaaaactgactacaaa 50751

>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ataaactaaatatttagttt 185
             ||||||||||||||||||||
Sbjct: 64933 ataaactaaatatttagttt 64952

>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
          Length = 94301

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ataaactaaatatttagttt 185
             ||||||||||||||||||||
Sbjct: 45652 ataaactaaatatttagttt 45671

>gb|AC135849.6| Pan troglodytes clone ptb-33n14, complete sequence
          Length = 72820

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     ggagtaaatttccaattttatttt 31
             ||||| ||||||||||||||||||
Sbjct: 13618 ggagttaatttccaattttatttt 13641

>gb|AC021120.6| Homo sapiens BAC clone RP11-347O8 from 4, complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      ggagtaaatttccaattttatttt 31
              ||||| ||||||||||||||||||
Sbjct: 173845 ggagttaatttccaattttatttt 173868

>dbj|AK009380.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310016D03 product:unclassifiable, full
            insert sequence
          Length = 1548

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   caattttattttcataatagattt 43
            ||||||||||| ||||||||||||
Sbjct: 1491 caattttatttgcataatagattt 1514

>gb|AC154485.2| Mus musculus BAC clone RP24-117M9 from chromosome 12, complete sequence
          Length = 154864

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    caattttattttcataatagattt 43
             ||||||||||| ||||||||||||
Sbjct: 49268 caattttatttgcataatagattt 49245

>gb|AC000085.5| Homo sapiens Chromosome 22q11.2 BAC Clone 72f8 In DGCR Region, complete
             sequence
          Length = 100152

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     ggagtaaatttccaattttatttt 31
             ||||| ||||||||||||||||||
Sbjct: 80213 ggagttaatttccaattttatttt 80190

>gb|AC000073.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 19d3 In DGCR Region,
             complete sequence
          Length = 39706

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     ggagtaaatttccaattttatttt 31
             ||||| ||||||||||||||||||
Sbjct: 16227 ggagttaatttccaattttatttt 16204

>gb|AC109347.3| Homo sapiens BAC clone RP11-73K9 from 4, complete sequence
          Length = 109668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     caattttattttcataatagattt 43
              ||||||||||||||||||| ||||
Sbjct: 101646 caattttattttcataatatattt 101669

>gb|AC105756.5| Homo sapiens BAC clone RP11-78A21 from 4, complete sequence
          Length = 156394

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ccaattttattttcataata 38
             ||||||||||||||||||||
Sbjct: 24665 ccaattttattttcataata 24684

>ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, erythroid derived 2,
            like 3 (predicted) (Nfe2l3_predicted), mRNA
          Length = 3024

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  acatatatcatcttctagat 337
            ||||||||||||||||||||
Sbjct: 2643 acatatatcatcttctagat 2624

>emb|AL954674.6| Zebrafish DNA sequence from clone CH211-282K23, complete sequence
          Length = 151174

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    taaatttccaattttatttt 31
             ||||||||||||||||||||
Sbjct: 12871 taaatttccaattttatttt 12890

>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence
          Length = 93578

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  ctagataagaagcagcaaaa 351
            ||||||||||||||||||||
Sbjct: 7414 ctagataagaagcagcaaaa 7395

>gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in
             B-cells 1 (NFKB1) gene, complete cds
          Length = 190000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     ggagtaaatttccaattttatttt 31
             ||||| ||||||||||||||||||
Sbjct: 51038 ggagttaatttccaattttatttt 51015

>emb|BX248136.12| Zebrafish DNA sequence from clone DKEY-81B15 in linkage group 20,
              complete sequence
          Length = 222316

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     attttattttcataatagat 41
              ||||||||||||||||||||
Sbjct: 188440 attttattttcataatagat 188421

>emb|AL049777.5|CNS00002 Human chromosome 14 DNA sequence BAC R-966I7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170307

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    caattttattttcataatag 39
             ||||||||||||||||||||
Sbjct: 64931 caattttattttcataatag 64950


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,600,596
Number of Sequences: 3902068
Number of extensions: 4600596
Number of successful extensions: 99985
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99913
Number of HSP's gapped (non-prelim): 72
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)