Clone Information

BLAST Search Result

Clone Name	rbart50h05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier ...	39	0.002
2	M2OM_BOVIN (P22292) Mitochondrial 2-oxoglutarate/malate carrier ...	39	0.003
3	OAC1_YEAST (P32332) Mitochondrial oxaloacetate transport protein...	39	0.004
4	DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute c...	39	0.004
5	M2OM_HUMAN (Q02978) Mitochondrial 2-oxoglutarate/malate carrier ...	39	0.004
6	M2OM_RAT (P97700) Mitochondrial 2-oxoglutarate/malate carrier pr...	37	0.011
7	DIC_MOUSE (Q9QZD8) Mitochondrial dicarboxylate carrier (Solute c...	37	0.011
8	DIF1_CAEEL (Q27257) Protein dif-1	33	0.22
9	COLT_DROME (Q9VQG4) Congested-like trachea protein	32	0.28
10	ADT_CHLKE (P31692) ADP,ATP carrier protein (ADP/ATP translocase)...	32	0.37
11	CMC1_CAEEL (Q21153) Probable calcium-binding mitochondrial carri...	31	0.63
12	TXTP_CAEEL (P34519) Putative tricarboxylate transport protein, m...	31	0.63
13	UCP4_HUMAN (O95847) Mitochondrial uncoupling protein 4 (UCP 4) (...	31	0.82
14	GHC2_HUMAN (Q9H1K4) Mitochondrial glutamate carrier 2 (GC-2) (Gl...	31	0.82
15	RIM2_YEAST (P38127) Mitochondrial carrier protein RIM2	30	1.4
16	GHC1_PONPY (Q5RD81) Mitochondrial glutamate carrier 1 (GC-1) (Gl...	30	1.4
17	GHC1_HUMAN (Q9H936) Mitochondrial glutamate carrier 1 (GC-1) (Gl...	30	1.4
18	TXTP_RAT (P32089) Tricarboxylate transport protein, mitochondria...	30	1.8
19	MCAT_RAT (P97521) Mitochondrial carnitine/acylcarnitine carrier ...	30	1.8
20	MCAT_MOUSE (Q9Z2Z6) Mitochondrial carnitine/acylcarnitine carrie...	29	2.4
21	COX18_YEAST (P53239) Inner membrane protein COX18, mitochondrial...	29	2.4
22	Y2143_SHEON (Q8EF50) Hypothetical transport protein SO2143	28	4.1
23	ATM_DEBHA (Q6BV76) Serine/threonine-protein kinase TEL1 (EC 2.7....	28	5.3
24	CMC1_PONPY (Q5RBC8) Calcium-binding mitochondrial carrier protei...	28	5.3
25	CMC1_HUMAN (O75746) Calcium-binding mitochondrial carrier protei...	28	5.3
26	UCP1_RABIT (P14271) Mitochondrial brown fat uncoupling protein 1...	28	5.3
27	GHC1_MOUSE (Q9D6M3) Mitochondrial glutamate carrier 1 (GC-1) (Gl...	28	5.3
28	ADT2_RAT (Q09073) ADP/ATP translocase 2 (Adenine nucleotide tran...	28	5.3
29	ADT2_MOUSE (P51881) ADP/ATP translocase 2 (Adenine nucleotide tr...	28	5.3
30	ADT2_HUMAN (P05141) ADP/ATP translocase 2 (Adenine nucleotide tr...	28	5.3
31	ADT2_BOVIN (Q8SQH5) ADP/ATP translocase 2 (Adenine nucleotide tr...	28	5.3
32	RS11_MYCPN (Q50296) 30S ribosomal protein S11	28	5.3
33	RR11_CYAPA (P48136) Cyanelle 30S ribosomal protein S11	28	5.3
34	MCAT_MACFA (Q8HXY2) Mitochondrial carnitine/acylcarnitine carrie...	28	5.3
35	ADT1_ANOGA (Q27238) ADP,ATP carrier protein 1 (ADP/ATP transloca...	28	5.3
36	GLGA_RHORT (Q2RS50) Glycogen synthase (EC 2.4.1.21) (Starch [bac...	28	5.3
37	Y736_BACTN (Q8A9S9) Hypothetical transport protein BT_0736	28	5.3
38	RS11_MYCGE (P47422) 30S ribosomal protein S11	28	5.3
39	CMC1_MOUSE (Q8BH59) Calcium-binding mitochondrial carrier protei...	28	6.9
40	RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large s...	27	9.1
41	TAP1_HUMAN (Q03518) Antigen peptide transporter 1 (APT1) (Peptid...	27	9.1
42	TAP1_GORGO (Q28433) Antigen peptide transporter 1 (APT1) (Peptid...	27	9.1
43	ADT2_PONPY (Q5R5A1) ADP/ATP translocase 2 (Adenine nucleotide tr...	27	9.1
44	MNCP_OXYFA (P15798) Macronuclear solute carrier homolog CR-MSC	27	9.1
45	SYFA_CLOAB (Q97GK9) Phenylalanyl-tRNA synthetase alpha chain (EC...	27	9.1
46	POLG_CSFVB (P21530) Genome polyprotein [Contains: N-terminal pro...	27	9.1
47	TRMB_ZYMMO (Q5NR81) tRNA (guanine-N(7)-)-methyltransferase (EC 2...	27	9.1

>M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           GK  Y   LD  ++ ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 254 GKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299

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>M2OM_BOVIN (P22292) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           GK  Y   LD  ++ ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 254 GKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299

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>OAC1_YEAST (P32332) Mitochondrial oxaloacetate transport protein|
           (Mitochondrial carrier protein PMT)
          Length = 324

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           Y G +DC ++T++  G    Y GF     RIAPH +M   F+
Sbjct: 265 YKGPIDCLVKTVRIEGVTALYKGFAAQVFRIAPHTIMCLTFM 306

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>DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute carrier family|
           25 member 10)
          Length = 287

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 354 KYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           K  Y G   CA++T K G P  FY G     +R+ PH ++T++FL
Sbjct: 231 KGEYQGVFHCAVETAKLG-PLAFYKGLVPAGIRLIPHTVLTFVFL 274

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>M2OM_HUMAN (Q02978) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           GK  Y   LD   + ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 254 GKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299

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>M2OM_RAT (P97700) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 354 KYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           K  Y   LD  ++ ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 255 KPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299

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>DIC_MOUSE (Q9QZD8) Mitochondrial dicarboxylate carrier (Solute carrier family|
           25 member 10)
          Length = 287

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -3

Query: 354 KYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 220
           K  Y G   CAM+T K G P  F+ G     +R+ PH ++T++FL
Sbjct: 230 KGEYQGVFHCAMETAKLG-PQAFFKGLFPAGIRLIPHTVLTFMFL 273

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>DIF1_CAEEL (Q27257) Protein dif-1|
          Length = 312

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -3

Query: 387 QIQKMQPDATGKYP-YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           +IQ M     G+ P +TG+LDC  +T+   G F  Y G     V ++P
Sbjct: 31  RIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSP 78

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>COLT_DROME (Q9VQG4) Congested-like trachea protein|
          Length = 306

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 387 QIQKMQPDATGKYP-YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++Q M   A G+ P Y G+ DCA +T+K  G    Y G       +AP
Sbjct: 42  RLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAP 89

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>ADT_CHLKE (P31692) ADP,ATP carrier protein (ADP/ATP translocase) (Adenine|
           nucleotide translocator) (ANT)
          Length = 339

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPV 268
           +TG +DC  + +K GGP   Y GF V
Sbjct: 187 FTGLVDCLSKVVKRGGPMALYQGFGV 212

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>CMC1_CAEEL (Q21153) Probable calcium-binding mitochondrial carrier K02F3.2|
          Length = 707

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWL 226
           G+  Y G +DCA + +K  GP   + G      R +P   +T L
Sbjct: 596 GQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLL 639



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           Q Q+      G+  Y  SLDC  + +K  G    Y G     V +AP
Sbjct: 398 QNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVAP 444

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>TXTP_CAEEL (P34519) Putative tricarboxylate transport protein, mitochondrial|
           precursor (Citrate transport protein) (CTP)
          Length = 312

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWL 226
           Y  +LDCAMQ  K  G F FY G      R+   V +T++
Sbjct: 256 YKNTLDCAMQIWKKEGFFAFYKGTVPRLSRVCLDVGITFM 295

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>UCP4_HUMAN (O95847) Mitochondrial uncoupling protein 4 (UCP 4) (Solute carrier|
           family 25 member 27)
          Length = 323

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWL 226
           Y  S DC +Q ++  G    Y GF    +R+ P  M+ WL
Sbjct: 270 YKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWL 309

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>GHC2_HUMAN (Q9H1K4) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)|
           symporter 2) (Solute carrier family 25 member 18)
          Length = 315

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           GK  Y G +DC M+T +  G F  Y G  V    + P
Sbjct: 41  GKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTP 77

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>RIM2_YEAST (P38127) Mitochondrial carrier protein RIM2|
          Length = 377

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = -3

Query: 378 KMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMM---TW 229
           +  P   GK  YTG +      +K  G F  YSG   + +R  P+ ++   TW
Sbjct: 317 RQTPKENGKRKYTGLVQSFKVIIKEEGLFSMYSGLTPHLMRTVPNSIIMFGTW 369

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>GHC1_PONPY (Q5RD81) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)|
           symporter 1) (Solute carrier family 25 member 22)
          Length = 323

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 378 KMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++Q    G+  YT   DC ++T+++ G F  Y G  V    + P
Sbjct: 35  RLQNQQNGQRMYTSMSDCLIKTIRSEGYFGMYRGAAVNLTLVTP 78



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           Y+G LDCA + ++  GP  F  G     + IAP
Sbjct: 265 YSGILDCARKILRHEGPSAFLKGAYCRALVIAP 297

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>GHC1_HUMAN (Q9H936) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)|
           symporter 1) (Solute carrier family 25 member 22)
          Length = 323

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 378 KMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++Q    G+  YT   DC ++T+++ G F  Y G  V    + P
Sbjct: 35  RLQNQQNGQRVYTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTP 78



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           Y+G LDCA + ++  GP  F  G     + IAP
Sbjct: 265 YSGILDCARKILRHEGPSAFLKGAYCRALVIAP 297

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>TXTP_RAT (P32089) Tricarboxylate transport protein, mitochondrial precursor|
           (Citrate transport protein) (CTP) (Tricarboxylate
           carrier protein) (Solute carrier family 25 member 1)
          Length = 311

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 351 YPYTGSLDCAMQTMKTGGPFKFYSG 277
           + Y  +LDC +Q +K  GP  FY G
Sbjct: 254 HKYRNTLDCGVQILKNEGPKAFYKG 278

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>MCAT_RAT (P97521) Mitochondrial carnitine/acylcarnitine carrier protein|
           (Carnitine/acylcarnitine translocase) (CAC) (Solute
           carrier family 25 member 20)
          Length = 301

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 363 ATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++GK  Y+G+LDCA +  +  G   FY G  +  +R  P
Sbjct: 143 SSGKNKYSGTLDCAKKLYQEFGIRGFYKGTALTLMRDVP 181

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>MCAT_MOUSE (Q9Z2Z6) Mitochondrial carnitine/acylcarnitine carrier protein|
           (Carnitine/acylcarnitine translocase) (CAC) (mCAC)
           (Solute carrier family 25 member 20)
          Length = 301

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 387 QIQKMQPDATGKYP-YTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++Q   P  +G+ P Y+G+LDC  +T+   G    Y G     + + P
Sbjct: 37  RLQTQPPSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTP 84



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 363 ATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++G+  Y+G+LDCA +  +  G   FY G  +  +R  P
Sbjct: 143 SSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVP 181

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>COX18_YEAST (P53239) Inner membrane protein COX18, mitochondrial precursor|
           (Cytochrome c oxidase assembly protein 18)
          Length = 316

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 173 SWRQYQSLLDTFNNFSAALHLPWLFLV 93
           S+  +QS+ DTF     A H+PW+ LV
Sbjct: 34  SFSLFQSVADTFLTVHEASHIPWIVLV 60

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>Y2143_SHEON (Q8EF50) Hypothetical transport protein SO2143|
          Length = 562

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 277 AGVELKWATSLHGLHGTVQRPSVWVLSS 360
           AG+   W  S H   G V  P+VW ++S
Sbjct: 423 AGLIFSWVRSFHPTFGWVPEPTVWFMNS 450

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>ATM_DEBHA (Q6BV76) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2948

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 32  NNVKSTTANVSYGKNCLKLCLPKTTTGDAKLLKS 133
           N   S    +SYG NCLKL + K+   + +L  S
Sbjct: 64  NKASSAEFRLSYGSNCLKLLIEKSLDYNQELRNS 97

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>CMC1_PONPY (Q5RBC8) Calcium-binding mitochondrial carrier protein Aralar1|
           (Mitochondrial aspartate glutamate carrier 1) (Solute
           carrier family 25 member 12)
          Length = 678

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMT 232
           G+  Y+G +DC  + ++  GP  F+ G      R +P   +T
Sbjct: 553 GQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVT 594

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>CMC1_HUMAN (O75746) Calcium-binding mitochondrial carrier protein Aralar1|
           (Mitochondrial aspartate glutamate carrier 1) (Solute
           carrier family 25 member 12)
          Length = 678

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMT 232
           G+  Y+G +DC  + ++  GP  F+ G      R +P   +T
Sbjct: 553 GQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVT 594

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>UCP1_RABIT (P14271) Mitochondrial brown fat uncoupling protein 1 (UCP 1)|
           (Thermogenin)
          Length = 306

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
 Frame = -3

Query: 378 KMQPDATGKYP------YTGSLDCAMQTMKTGGPFKFYSGFP 271
           K++    G++P      Y G L       KT GP K YSG P
Sbjct: 38  KVRQQIQGEFPITSGIRYKGVLGTITTLAKTEGPLKLYSGLP 79

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>GHC1_MOUSE (Q9D6M3) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)|
           symporter 1) (Solute carrier family 25 member 22)
          Length = 323

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 378 KMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++Q    G+  Y    DC ++T+++ G F  Y G  V    + P
Sbjct: 35  RLQNQQNGQRMYASMSDCLIKTIRSEGYFGMYRGAAVNLTLVTP 78

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>ADT2_RAT (Q09073) ADP/ATP translocase 2 (Adenine nucleotide translocator 2)|
           (ANT 2) (ADP,ATP carrier protein 2) (Solute carrier
           family 25 member 5)
          Length = 297

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLF 223
           Q+Q      T    Y G +DC ++  K  G   F+ G     +R  P   + + F
Sbjct: 36  QVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAF 90

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>ADT2_MOUSE (P51881) ADP/ATP translocase 2 (Adenine nucleotide translocator 2)|
           (ANT 2) (ADP,ATP carrier protein 2) (Solute carrier
           family 25 member 5)
          Length = 297

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLF 223
           Q+Q      T    Y G +DC ++  K  G   F+ G     +R  P   + + F
Sbjct: 36  QVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAF 90

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>ADT2_HUMAN (P05141) ADP/ATP translocase 2 (Adenine nucleotide translocator 2)|
           (ANT 2) (ADP,ATP carrier protein 2) (Solute carrier
           family 25 member 5) (ADP,ATP carrier protein, fibroblast
           isoform)
          Length = 297

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLF 223
           Q+Q      T    Y G +DC ++  K  G   F+ G     +R  P   + + F
Sbjct: 36  QVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAF 90

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>ADT2_BOVIN (Q8SQH5) ADP/ATP translocase 2 (Adenine nucleotide translocator 2)|
           (ANT 2) (ADP,ATP carrier protein 2) (Solute carrier
           family 25 member 5)
          Length = 297

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLF 223
           Q+Q      T    Y G +DC ++  K  G   F+ G     +R  P   + + F
Sbjct: 36  QVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAF 90

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>RS11_MYCPN (Q50296) 30S ribosomal protein S11|
          Length = 121

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 135 IKCVEQGLILS---PTGDLICRSSSGTSGFDSRRATSS*HAG 251
           + C     I+S   P G+++C +SSGT GF   R  +   AG
Sbjct: 16  VSCSPNNTIVSASDPGGNVLCWASSGTMGFKGSRKKTPYSAG 57

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>RR11_CYAPA (P48136) Cyanelle 30S ribosomal protein S11|
          Length = 130

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 159 ILSPTGDLICRSSSGTSGFDSRR 227
           I SPTG++I  +S+G+SGF   R
Sbjct: 35  ITSPTGEVIAWASAGSSGFKGAR 57

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>MCAT_MACFA (Q8HXY2) Mitochondrial carnitine/acylcarnitine carrier protein|
           (Carnitine/acylcarnitine translocase) (CAC) (Solute
           carrier family 25 member 20)
          Length = 301

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 363 ATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAP 247
           ++G+  YTG+LDCA +  +  G    Y G  V  +R  P
Sbjct: 143 SSGETKYTGTLDCAKKLYQEFGIRGIYKGTVVTLMRDVP 181

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>ADT1_ANOGA (Q27238) ADP,ATP carrier protein 1 (ADP/ATP translocase 1) (Adenine|
           nucleotide translocator 1) (ANT 1)
          Length = 301

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPV 268
           G+  + G LDC  +T+K+ G    Y GF V
Sbjct: 152 GEREFNGLLDCLKKTVKSDGIIGLYRGFNV 181

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>GLGA_RHORT (Q2RS50) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 485

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = -3

Query: 357 GKYPYTGS----LDCAMQTMKTGGPFKFYSG 277
           G  P TG     LDC     +TGGP+  YSG
Sbjct: 74  GTMPDTGCPLWLLDCPAMYERTGGPYMMYSG 104

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>Y736_BACTN (Q8A9S9) Hypothetical transport protein BT_0736|
          Length = 564

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 277 AGVELKWATSLHGLHGTVQRPSVWVLSS 360
           AG+   W  S H   G +  PS+WVL++
Sbjct: 426 AGLVFGWLRSKHPTFGGIPEPSLWVLNN 453

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>RS11_MYCGE (P47422) 30S ribosomal protein S11|
          Length = 131

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 135 IKCVEQGLILS---PTGDLICRSSSGTSGFDSRRATSS*HAG 251
           + C     I+S   P+G+++C +SSGT GF   R  +   AG
Sbjct: 16  VSCSPNNTIVSATDPSGNVLCWASSGTVGFKGFRKKTPYSAG 57

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>CMC1_MOUSE (Q8BH59) Calcium-binding mitochondrial carrier protein Aralar1|
           (Mitochondrial aspartate glutamate carrier 1) (Solute
           carrier family 25 member 12)
          Length = 677

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -3

Query: 357 GKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMT 232
           G+  Y+G +DC  + ++  GP  F+ G      R +P   +T
Sbjct: 553 GQTTYSGVVDCFRKILREEGPSAFWKGTAARVFRSSPQFGVT 594

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>RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
          Length = 812

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 345 YTGSLDCAMQTMKTGGPFKFYSGFPV 268
           Y G+L+ + +  +T GP++ Y G PV
Sbjct: 547 YYGALEASCELAQTEGPYETYEGSPV 572

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>TAP1_HUMAN (Q03518) Antigen peptide transporter 1 (APT1) (Peptide transporter|
           TAP1) (ATP-binding cassette sub-family B member 2)
           (Peptide transporter PSF1) (Peptide supply factor 1)
           (PSF-1) (Peptide transporter involved in antigen
           processing 1)
          Length = 748

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = -2

Query: 283 LRLSSILCQDRPACHDDVALLESNPEVPEEDRHIRSPVGDSINPCSTHLITFQQLCISRG 104
           L++  +L +        V L+  +  + E+  HI    G +I    TH    QQL   +G
Sbjct: 679 LQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIREGGTH----QQLMEKKG 734

Query: 103 CFW 95
           C+W
Sbjct: 735 CYW 737

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>TAP1_GORGO (Q28433) Antigen peptide transporter 1 (APT1) (Peptide transporter|
           TAP1) (ATP-binding cassette sub-family B member 2)
          Length = 748

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = -2

Query: 283 LRLSSILCQDRPACHDDVALLESNPEVPEEDRHIRSPVGDSINPCSTHLITFQQLCISRG 104
           L++  +L +        V L+  +  + E+  HI    G +I    TH    QQL   +G
Sbjct: 679 LQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIREGGTH----QQLMEKKG 734

Query: 103 CFW 95
           C+W
Sbjct: 735 CYW 737

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>ADT2_PONPY (Q5R5A1) ADP/ATP translocase 2 (Adenine nucleotide translocator 2)|
           (ANT 2) (ADP,ATP carrier protein 2) (Solute carrier
           family 25 member 5)
          Length = 297

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLF 223
           Q+Q      T    Y G +DC ++  K  G   F+ G     +R  P   + + F
Sbjct: 36  QVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRHFPTQALNFAF 90

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>MNCP_OXYFA (P15798) Macronuclear solute carrier homolog CR-MSC|
          Length = 371

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = -3

Query: 387 QIQKMQPDATGKYPYTGSLDCAMQTMKTGGPFK-------FYSGFPVYCVRI 253
           ++  M+P   G+ PY G +DC  + +K     K       FY+G   Y +R+
Sbjct: 244 RLHTMRPLPNGQMPYNGMIDCFNKIIKYECNSKWMSNFGSFYAGGEAYFLRL 295

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>SYFA_CLOAB (Q97GK9) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 339

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 229 PRHHDMRGDPDTIYWKAGVELKWATSLHGLHGTV-QRPSVWVLSSG 363
           P++H  RG+ DT Y    V L+  TS   +   + Q+P + ++S G
Sbjct: 147 PKNHPARGEQDTFYINDNVVLRTQTSPVQVRTMLNQKPPIKMISPG 192

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>POLG_CSFVB (P21530) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3898

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 17  LCDYCNNVKSTTANVSYGKNCLKLCLPKTT 106
           L  YCN V +    + Y  NC   CLPK T
Sbjct: 495 LSPYCN-VTTKIGYIWYTNNCTPACLPKNT 523

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>TRMB_ZYMMO (Q5NR81) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 231

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 339 GSLDCAMQTMKTGGPFKFYSGFPVYC 262
           G +    + MK GG F+F +  P+YC
Sbjct: 152 GPIGLIARKMKKGGEFRFGTDHPIYC 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,686,858
Number of Sequences: 219361
Number of extensions: 1046219
Number of successful extensions: 2703
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result