>gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome 13, complete sequence
          Length = 191185

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 176    gtgacaacaacaaaattcctatcttta 202
              ||||||||||||||| |||||||||||
Sbjct: 149535 gtgacaacaacaaaaatcctatcttta 149509

>gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, complete sequence
          Length = 186601

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 176  gtgacaacaacaaaattcctatcttta 202
            ||||||||||||||| |||||||||||
Sbjct: 8165 gtgacaacaacaaaaatcctatcttta 8139

>emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chromosome X, complete
             sequence
          Length = 77486

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 19    attttcccattgttcttttggt 40
             ||||||||||||||||||||||
Sbjct: 10634 attttcccattgttcttttggt 10655

>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence
          Length = 190857

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  cactcctccagcatgaaact 141
            ||||||||||||||||||||
Sbjct: 5283 cactcctccagcatgaaact 5302

>gb|AC102143.10| Mus musculus chromosome 7, clone RP23-292M1, complete sequence
          Length = 169980

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     attttcccattgttcttttg 38
              ||||||||||||||||||||
Sbjct: 149644 attttcccattgttcttttg 149663

>ref|XM_449535.1| Candida glabrata CBS138 hypothetical protein (CAGL0M04323g) partial
            mRNA
          Length = 2112

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   attttcccattgttcttttg 38
            ||||||||||||||||||||
Sbjct: 1133 attttcccattgttcttttg 1114

>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete
            sequence
          Length = 225685

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  gacataagaatacatgtaca 251
            ||||||||||||||||||||
Sbjct: 2677 gacataagaatacatgtaca 2658

>emb|X54411.1|PCCELLUG P.chrysosporium cellulase genes
          Length = 4468

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  gcccatccaccgggcgcagc 350
            ||||||||||||||||||||
Sbjct: 2967 gcccatccaccgggcgcagc 2948

>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     attttcccattgttcttttg 38
              ||||||||||||||||||||
Sbjct: 475137 attttcccattgttcttttg 475156

>gb|AC128795.1| Homo sapiens 12 BAC RP11-181D11 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 23870

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 gagacataagaatacatgta 249
           ||||||||||||||||||||
Sbjct: 415 gagacataagaatacatgta 396

>emb|AJ630371.1| Candida glabrata ace2 gene for transcription factor
          Length = 2112

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   attttcccattgttcttttg 38
            ||||||||||||||||||||
Sbjct: 1133 attttcccattgttcttttg 1114

>gb|AC108720.3| Homo sapiens 12 BAC RP11-251C23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 86966

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  gagacataagaatacatgta 249
            ||||||||||||||||||||
Sbjct: 1590 gagacataagaatacatgta 1609

>gb|AC062004.5| Homo sapiens chromosome 8, clone RP11-325O20, complete sequence
          Length = 205646

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    acaaaattcctatctttaca 204
              ||||||||||||||||||||
Sbjct: 127583 acaaaattcctatctttaca 127564

>gb|AC110572.13| Mus musculus chromosome 5, clone RP23-316P20, complete sequence
          Length = 170850

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   cactcctccagcatgaaact 141
             ||||||||||||||||||||
Sbjct: 29407 cactcctccagcatgaaact 29388

>gb|AC122247.5| Mus musculus BAC clone RP23-155D8 from 16, complete sequence
          Length = 208505

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   gacataagaatacatgtaca 251
             ||||||||||||||||||||
Sbjct: 49529 gacataagaatacatgtaca 49548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,331,955
Number of Sequences: 3902068
Number of extensions: 3331955
Number of successful extensions: 60251
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60222
Number of HSP's gapped (non-prelim): 29
length of query: 351
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 329
effective length of database: 17,147,199,772
effective search space: 5641428724988
effective search space used: 5641428724988
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)