Clone Name | rbart50g08 |
---|---|
Clone Library Name | barley_pub |
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 38.1 bits (87), Expect = 0.006 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = -1 Query: 213 WTMNGLSSMVDIKPGTACLAFARMEGVKGRDLAAPAVLIGGFQMENTLLEFDMAKKRLGF 34 W ++G MV +PG CL + G + +G Q+E L+ FD+A+ R+GF Sbjct: 352 WRISGEDLMVQAQPGVTCLGV-----MNGGMQPRAEITLGARQLEENLVVFDLARSRVGF 406
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 37.7 bits (86), Expect = 0.008 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = -1 Query: 213 WTMNGLSSMVDIKPGTACLAFARMEGVKGRDLAAPAVLIGGFQMENTLLEFDMAKKRLGF 34 W ++G MV +PG CL + G V +G Q+E L+ FD+A+ R+GF Sbjct: 358 WRISGEDLMVQAQPGVTCLGV-----MNGGMQPRAEVTLGTRQLEEKLMVFDLARSRVGF 412
>ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16) Length = 1222 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%) Frame = +1 Query: 7 ALGEEGQPDEPEP--LLGHVELQQGVLHLEPSDEHRRRGEVPTLDPLHPRERQARR---- 168 A G P++P+P G L+ G L + E RG+ + D +H + R+ RR Sbjct: 30 AAAASGSPEDPQPPPFSGSSWLETGEYDLVSAYEVDHRGDYVSHDIMHYQRRRRRRAVTQ 89 Query: 169 PGLDVHH 189 PG D H Sbjct: 90 PGGDALH 96
>Y1408_METKA (Q8TVI1) UPF0245 protein MK1408| Length = 402 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -1 Query: 192 SMVDIKPGTACLAFARMEGVKGRDLAAPAVLIGGFQMENTLLE 64 S+VD+KPG LA+ E KGR G ++E T++E Sbjct: 367 SVVDLKPGDKVLAYVETEEGKGRHF--------GMEVEETIVE 401
>TAF9B_HUMAN (Q9HBM6) Transcription initiation factor TFIID subunit 9B| (Transcription initiation factor TFIID subunit 9-like protein) (Transcription-associated factor TAFII31L) (Neuronal cell death-related protein 7) (DN-7) Length = 251 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = +2 Query: 95 PMSTAGAARSRPLTPSIRANARHAVPGLMST---IELSPFMVQFLPPPSVSVTP 247 P + GA S+P TP+I +VP ++T + F VQ P S V P Sbjct: 144 PRLSVGAVSSKPTTPTIATPQTVSVPNKVATPMSVTSQRFTVQIPPSQSTPVKP 197
>ATF6B_HUMAN (Q99941) Cyclic AMP-dependent transcription factor ATF-6 beta| (Activating transcription factor 6 beta) (ATF6-beta) (cAMP-responsive element-binding protein-like 1) (cAMP response element-binding protein-related protein) (Creb-rp) (Protein G13 Length = 703 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/57 (26%), Positives = 30/57 (52%) Frame = +2 Query: 83 IWNPPMSTAGAARSRPLTPSIRANARHAVPGLMSTIELSPFMVQFLPPPSVSVTPGT 253 +W+ P + GA + + PS+ ++ A+P ++ P ++ +P PS +V P T Sbjct: 210 LWDVPAPSLGAVQIS-MGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPST 265
>DUS2L_HUMAN (Q9NX74) tRNA-dihydrouridine synthase 2-like (EC 1.-.-.-) (hDUS2)| (Up-regulated in lung cancer) (URLC8) Length = 493 Score = 29.3 bits (64), Expect = 2.8 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 64 LQQGVLHLEPSDEHRRRGEVPTLDPLHPRERQARRPG 174 L +G L E H+R+ E P DP PR ++ +PG Sbjct: 436 LPEGRLGEESPSLHKRKREAPDQDPGGPRAQELAQPG 472
>RL10A_CHLRE (Q9SW75) 60S ribosomal protein L10a| Length = 213 Score = 29.3 bits (64), Expect = 2.8 Identities = 21/57 (36%), Positives = 26/57 (45%) Frame = +1 Query: 19 EGQPDEPEPLLGHVELQQGVLHLEPSDEHRRRGEVPTLDPLHPRERQARRPGLDVHH 189 EG +P VELQ G+ + +P + R G V P PR R R G DV H Sbjct: 18 EGAKTKPRKFQETVELQIGLKNYDPQKDKRFSGSVRL--PFVPRPRMRVRAG-DVKH 71
>PPDK_RHIME (Q59754) Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate,| orthophosphate dikinase) Length = 898 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = +2 Query: 122 SRPLTPSIRANARHAVPGLMSTI 190 +RPL S+R+ AR ++PG+M T+ Sbjct: 88 NRPLLLSVRSGARASMPGMMDTV 110
>G7C_HUMAN (Q9Y334) Protein G7c precursor| Length = 852 Score = 28.9 bits (63), Expect = 3.6 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = +1 Query: 1 VAALGEEGQPDEPEPLLGHVELQQGVLHLEPSDEHRRRGEVPTLDPLHPRER 156 V LG P +P+P HV L +GV E G+VP L+P+ P ER Sbjct: 637 VTGLGSRANPGDPQPHFSHVIL-RGV------PEGAELGQVP-LEPVGPPER 680
>DAPA_MAIZE (P26259) Dihydrodipicolinate synthase, chloroplast precursor (EC| 4.2.1.52) (DHDPS) Length = 380 Score = 28.5 bits (62), Expect = 4.7 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +2 Query: 95 PMSTAGAARSRPLTPSIRANARHAVPGLMS 184 P+S GAA + P +PS+ A R GL S Sbjct: 15 PVSNGGAATASPSSPSVAARPRRLPSGLQS 44
>P73_HUMAN (O15350) Tumor protein p73 (p53-like transcription factor)| (p53-related protein) Length = 636 Score = 28.1 bits (61), Expect = 6.1 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Frame = +2 Query: 92 PPMSTAGAARSRPLTPSIRANARHAVP--GLMSTIELSPFMV---QFLPPPSVSVTP 247 PP S+A P+ P + N HAVP G MS+ + MV PPP P Sbjct: 435 PPHSSAATPNLGPVGPGMLNNHGHAVPANGEMSSSHSAQSMVSGSHCTPPPPYHADP 491
>YND4_YEAST (P53963) Hypothetical 69.4 kDa protein in NCE3-HHT2 intergenic| region Length = 612 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 Query: 38 PSRFLAMSNSSRVFSIWNPPMS 103 PS ++S SS V+S WNPP S Sbjct: 199 PSLTSSVSTSSSVYSSWNPPHS 220
>YNB8_YEAST (P53976) Hypothetical 69.6 kDa protein in HDA1-PUB1 intergenic| region Length = 612 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 Query: 38 PSRFLAMSNSSRVFSIWNPPMS 103 PS ++S SS V+S WNPP S Sbjct: 199 PSLTSSVSTSSSVYSSWNPPHS 220
>INVO_AOTTR (P24708) Involucrin| Length = 544 Score = 27.7 bits (60), Expect = 8.0 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = +1 Query: 28 PDEPEPLLGHVELQQG-VLHLEPSDEHRRRGEVPTLDPLHPR--ERQARRP 171 P++ E L +E Q+G V HLE +E + E P HP E+Q P Sbjct: 295 PEQQEGQLKQLEEQEGQVKHLEQQEEQLKHLEQQEGQPKHPEQLEKQLEHP 345 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,320,434 Number of Sequences: 219361 Number of extensions: 591108 Number of successful extensions: 2334 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2280 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2330 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)